CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50188908|50189195
Strand -
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence GTCCAGATTCACCAGGGGGTCCAGCCAATCCAGGGGGGCCCATGGGACCAGGGGGACCACGTTCACCACTTGCTCCAGAGGGACCTTGTTTGCCAGGTTCACCCTAAGGGAGAAGAAAGAGTCAGGCCAGAGATAGGGTCTGGGAGGACCCTTGAGTCCGCTGGAGTCATCTCTACCAAATCTGTTCTCCTTGGCTCCGCCCCACTCCAAGTCCTGTGATGGTTTTTCTCAGGGCCCCCCAAGGTGAGGGGGGCACTTACAGAGGGGCCAGGAAGACCAGGGAAGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50188908|50189195 hsa-miR-122-5p 0 0 1
chr17:50188908|50189195 hsa-miR-122-3p 0 0 1
chr17:50188908|50189195 hsa-miR-143-5p 0 0 1
chr17:50188908|50189195 hsa-miR-143-3p 0 0 1
chr17:50188908|50189195 hsa-miR-302a-5p 0 0 1
chr17:50188908|50189195 hsa-miR-302a-3p 0 0 1
chr17:50188908|50189195 hsa-miR-302b-5p 0 0 1
chr17:50188908|50189195 hsa-miR-302b-3p 0 0 1
chr17:50188908|50189195 hsa-miR-302c-5p 0 0 1
chr17:50188908|50189195 hsa-miR-302c-3p 0 0 1
chr17:50188908|50189195 hsa-miR-302d-5p 0 0 1
chr17:50188908|50189195 hsa-miR-302d-3p 0 0 1
chr17:50188908|50189195 hsa-miR-372-5p 0 0 1
chr17:50188908|50189195 hsa-miR-372-3p 0 0 1
chr17:50188908|50189195 hsa-miR-373-5p 0 0 1
chr17:50188908|50189195 hsa-miR-373-3p 0 0 1
chr17:50188908|50189195 hsa-miR-379-5p 0 0 1
chr17:50188908|50189195 hsa-miR-379-3p 0 0 1
chr17:50188908|50189195 hsa-miR-326 0 0 1
chr17:50188908|50189195 hsa-miR-345-5p 0 0 1
chr17:50188908|50189195 hsa-miR-345-3p 0 0 1
chr17:50188908|50189195 hsa-miR-422a 0 0 1
chr17:50188908|50189195 hsa-miR-432-5p 0 0 1
chr17:50188908|50189195 hsa-miR-432-3p 0 0 1
chr17:50188908|50189195 hsa-miR-520e-5p 0 0 1
chr17:50188908|50189195 hsa-miR-520e-3p 0 0 1
chr17:50188908|50189195 hsa-miR-520b-5p 0 0 1
chr17:50188908|50189195 hsa-miR-520b-3p 0 0 1
chr17:50188908|50189195 hsa-miR-539-5p 0 0 1
chr17:50188908|50189195 hsa-miR-539-3p 0 0 1
chr17:50188908|50189195 hsa-miR-624-5p 0 0 1
chr17:50188908|50189195 hsa-miR-624-3p 0 0 1
chr17:50188908|50189195 hsa-miR-647 0 0 1
chr17:50188908|50189195 hsa-miR-766-5p 0 0 1
chr17:50188908|50189195 hsa-miR-766-3p 0 0 1
chr17:50188908|50189195 hsa-miR-890 0 0 1
chr17:50188908|50189195 hsa-miR-942-5p 0 0 1
chr17:50188908|50189195 hsa-miR-942-3p 0 0 1
chr17:50188908|50189195 hsa-miR-1291 0 1 1
chr17:50188908|50189195 hsa-miR-1275 0 0 1
chr17:50188908|50189195 hsa-miR-302e 0 0 1
chr17:50188908|50189195 hsa-miR-296-5p 0 1 1
chr17:50188908|50189195 hsa-miR-490-3p 0 0 1
chr17:50188908|50189195 hsa-miR-508-5p 0 1 1
chr17:50188908|50189195 hsa-miR-331-3p 0 1 1
chr17:50188908|50189195 hsa-miR-513a-5p 0 0 1
chr17:50188908|50189195 hsa-miR-125a-5p 0 0 1
chr17:50188908|50189195 hsa-miR-330-5p 0 0 1
chr17:50188908|50189195 hsa-miR-520d-3p 0 0 1
chr17:50188908|50189195 hsa-miR-519b-3p 0 0 1
chr17:50188908|50189195 hsa-miR-519c-3p 0 0 1
chr17:50188908|50189195 hsa-miR-520a-3p 0 0 1
chr17:50188908|50189195 hsa-miR-520c-3p 0 0 1
chr17:50188908|50189195 hsa-miR-548d-3p 0 0 1
chr17:50188908|50189195 hsa-miR-1274a 0 0 1
chr17:50188908|50189195 hsa-miR-125b 0 0 1
chr17:50188908|50189195 hsa-miR-642 0 0 1
chr17:50188908|50189195 hsa-miR-220c 0 0 1
chr17:50188908|50189195 hsa-miR-378 0 0 1
chr17:50188908|50189195 hsa-miR-516b 0 0 1
chr17:50188908|50189195 hsa-miR-519a 0 0 1
chr17:50188908|50189195 hsa-miR-492 0 1 0
chr17:50188908|50189195 hsa-miR-608 1 0 0
chr17:50188908|50189195 hsa-miR-762 1 0 0
chr17:50188908|50189195 hsa-miR-3128 0 1 0
chr17:50188908|50189195 hsa-miR-3166 0 1 0
chr17:50188908|50189195 hsa-miR-3176 0 1 0
chr17:50188908|50189195 hsa-miR-4319 0 1 0
chr17:50188908|50189195 hsa-miR-4251 0 1 0
chr17:50188908|50189195 hsa-miR-4287 0 1 0
chr17:50188908|50189195 hsa-miR-3135b 1 0 0
chr17:50188908|50189195 hsa-miR-4481 0 1 0
chr17:50188908|50189195 hsa-miR-4488 1 0 0
chr17:50188908|50189195 hsa-miR-4651 1 0 0
chr17:50188908|50189195 hsa-miR-6088 0 1 0
chr17:50188908|50189195 hsa-miR-378j 0 1 0
chr17:50188908|50189195 hsa-miR-8056 0 1 0
chr17:50188908|50189195 hsa-miR-8073 0 1 0
chr17:50188908|50189195 hsa-miR-4433b-3p 1 0 0
chr17:50188908|50189195 hsa-miR-6765-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6861-5p 1 0 0
chr17:50188908|50189195 hsa-miR-25-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6746-5p 1 0 0
chr17:50188908|50189195 hsa-miR-505-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6842-3p 0 1 0
chr17:50188908|50189195 hsa-miR-3663-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6742-5p 1 0 0
chr17:50188908|50189195 hsa-miR-3180-3p 1 1 0
chr17:50188908|50189195 hsa-miR-4753-3p 0 1 0
chr17:50188908|50189195 hsa-miR-6760-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6782-5p 1 0 0
chr17:50188908|50189195 hsa-miR-3191-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6830-3p 0 1 0
chr17:50188908|50189195 hsa-miR-4640-3p 0 1 0
chr17:50188908|50189195 hsa-miR-660-3p 0 1 0
chr17:50188908|50189195 hsa-miR-744-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6859-3p 0 1 0
chr17:50188908|50189195 hsa-miR-454-5p 0 1 0
chr17:50188908|50189195 hsa-miR-371b-3p 0 1 0
chr17:50188908|50189195 hsa-miR-642a-5p 0 1 0
chr17:50188908|50189195 hsa-miR-221-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6812-5p 1 1 0
chr17:50188908|50189195 hsa-miR-6816-5p 0 1 0
chr17:50188908|50189195 hsa-miR-1343-5p 1 0 0
chr17:50188908|50189195 hsa-miR-3180 1 1 0
chr17:50188908|50189195 hsa-miR-5001-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6737-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6754-5p 1 1 0
chr17:50188908|50189195 hsa-miR-6756-5p 1 1 0
chr17:50188908|50189195 hsa-miR-6803-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6819-5p 1 1 0
chr17:50188908|50189195 hsa-miR-6842-5p 1 0 0
chr17:50188908|50189195 hsa-miR-3620-5p 1 0 0
chr17:50188908|50189195 hsa-miR-10396b-5p 1 0 0
chr17:50188908|50189195 hsa-miR-1237-5p 1 1 0
chr17:50188908|50189195 hsa-miR-328-5p 1 0 0
chr17:50188908|50189195 hsa-miR-4685-5p 1 1 0
chr17:50188908|50189195 hsa-miR-4745-5p 1 1 0
chr17:50188908|50189195 hsa-miR-6846-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6885-5p 0 1 0
chr17:50188908|50189195 hsa-miR-3940-5p 1 0 0
chr17:50188908|50189195 hsa-miR-4646-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6724-5p 0 1 0
chr17:50188908|50189195 hsa-miR-6791-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6753-3p 1 0 0
chr17:50188908|50189195 hsa-miR-6859-5p 1 0 0
chr17:50188908|50189195 hsa-miR-4768-5p 1 0 0
chr17:50188908|50189195 hsa-miR-6848-3p 0 1 0
chr17:50188908|50189195 hsa-miR-3922-3p 0 1 0
chr17:50188908|50189195 hsa-miR-6839-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:50188908|50189195
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MLQRDLVCQVHPKGEERVRPEIGSGRTLESAGVISTKSVLLGSAPLQVL
Nucleotide Sequence TTGCTCCAGAGGGACCTTGTTTGCCAGGTTCACCCTAAGGGAGAAGAAAGAGTCAGGCCAGAGATAGGGTCTGGGAGGACCCTTGAGTCCGCTGGAGTCATCTCTACCAAATCTGTTCTCCTTGGCTCCGCCCCACTCCAAGTCCTGTGA

CircID chr17:50188908|50189195
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MGGPLSPLESSLPNLFSLAPPHSKSCDGFSQGPPR
Nucleotide Sequence CTGGGAGGACCCTTGAGTCCGCTGGAGTCATCTCTACCAAATCTGTTCTCCTTGGCTCCGCCCCACTCCAAGTCCTGTGATGGTTTTTCTCAGGGCCCCCCAAGGTGA

CircID chr17:50188908|50189195
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MEWGGAKENRFGRDDSSGLKGPPRPYLWPDSFFSLRVNLANKVPLEQVVNVVPLVPWAPLDWLDPLVNLD
Nucleotide Sequence TTGGAGTGGGGCGGAGCCAAGGAGAACAGATTTGGTAGAGATGACTCCAGCGGACTCAAGGGTCCTCCCAGACCCTATCTCTGGCCTGACTCTTTCTTCTCCCTTAGGGTGAACCTGGCAAACAAGGTCCCTCTGGAGCAAGTGGTGAACGTGGTCCCCCTGGTCCCATGGGCCCCCCTGGATTGGCTGGACCCCCTGGTGAATCTGGAC

CircID chr17:50188908|50189195
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MGGPEKNHHRTWSGAEPRRTDLVEMTPADSRVLPDPISGLTLSSPLG
Nucleotide Sequence TTGGGGGGCCCTGAGAAAAACCATCACAGGACTTGGAGTGGGGCGGAGCCAAGGAGAACAGATTTGGTAGAGATGACTCCAGCGGACTCAAGGGTCCTCCCAGACCCTATCTCTGGCCTGACTCTTTCTTCTCCCTTAGGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites