CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50189397|50189525
Strand +
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence CCCCTGGCCCTCCTGGTCCTGCTGGCAAAGAAGGCGGCAAAGGTCCCCGTGGTGAGACTGGCCCTGCTGGACGTCCTGGTGAAGTTGGTCCCCCTGGTCCCCCTGGCCCTGCTGGCGAGAAAGGATCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50189397|50189525 hsa-miR-197-5p 0 0 1
chr17:50189397|50189525 hsa-miR-197-3p 0 0 1
chr17:50189397|50189525 hsa-miR-214-5p 0 0 1
chr17:50189397|50189525 hsa-miR-214-3p 0 0 1
chr17:50189397|50189525 hsa-miR-412-5p 0 0 1
chr17:50189397|50189525 hsa-miR-412-3p 0 0 1
chr17:50189397|50189525 hsa-miR-665 0 1 1
chr17:50189397|50189525 hsa-miR-1226-5p 0 0 1
chr17:50189397|50189525 hsa-miR-1226-3p 0 0 1
chr17:50189397|50189525 hsa-miR-1229-5p 0 0 1
chr17:50189397|50189525 hsa-miR-1229-3p 0 0 1
chr17:50189397|50189525 hsa-miR-1202 1 1 1
chr17:50189397|50189525 hsa-miR-1286 0 1 1
chr17:50189397|50189525 hsa-miR-1248 0 0 1
chr17:50189397|50189525 hsa-miR-501-5p 0 1 1
chr17:50189397|50189525 hsa-miR-338-3p 0 0 1
chr17:50189397|50189525 hsa-miR-220b 0 0 1
chr17:50189397|50189525 hsa-miR-761 0 1 0
chr17:50189397|50189525 hsa-miR-3918 0 1 0
chr17:50189397|50189525 hsa-miR-4530 1 1 0
chr17:50189397|50189525 hsa-miR-6084 1 0 0
chr17:50189397|50189525 hsa-miR-6132 0 1 0
chr17:50189397|50189525 hsa-miR-6165 1 1 0
chr17:50189397|50189525 hsa-miR-6510-5p 0 1 0
chr17:50189397|50189525 hsa-miR-6798-5p 1 1 0
chr17:50189397|50189525 hsa-miR-3194-5p 1 1 0
chr17:50189397|50189525 hsa-miR-4640-5p 1 1 0
chr17:50189397|50189525 hsa-miR-6753-5p 1 1 0
chr17:50189397|50189525 hsa-miR-7161-3p 1 0 0
chr17:50189397|50189525 hsa-miR-4690-5p 1 0 0
chr17:50189397|50189525 hsa-miR-4733-3p 0 1 0
chr17:50189397|50189525 hsa-miR-4776-5p 1 1 0
chr17:50189397|50189525 hsa-miR-6895-5p 0 1 0
chr17:50189397|50189525 hsa-miR-3191-3p 1 0 0
chr17:50189397|50189525 hsa-miR-744-5p 0 1 0
chr17:50189397|50189525 hsa-miR-6880-3p 0 1 0
chr17:50189397|50189525 hsa-miR-3144-5p 0 1 0
chr17:50189397|50189525 hsa-miR-6759-3p 0 1 0
chr17:50189397|50189525 hsa-miR-6722-3p 1 0 0
chr17:50189397|50189525 hsa-miR-6808-5p 1 0 0
chr17:50189397|50189525 hsa-miR-6836-5p 1 1 0
chr17:50189397|50189525 hsa-miR-328-5p 1 0 0
chr17:50189397|50189525 hsa-miR-4649-5p 1 0 0
chr17:50189397|50189525 hsa-miR-4685-5p 0 1 0
chr17:50189397|50189525 hsa-miR-4726-5p 0 1 0
chr17:50189397|50189525 hsa-miR-4749-5p 1 0 0
chr17:50189397|50189525 hsa-miR-6794-5p 1 1 0
chr17:50189397|50189525 hsa-miR-6795-5p 1 0 0
chr17:50189397|50189525 hsa-miR-6887-5p 1 0 0
chr17:50189397|50189525 hsa-miR-6885-5p 1 0 0
chr17:50189397|50189525 hsa-miR-6511a-3p 0 1 0
chr17:50189397|50189525 hsa-miR-6837-5p 1 1 0
chr17:50189397|50189525 hsa-miR-6511b-3p 0 1 0
chr17:50189397|50189525 hsa-miR-3619-5p 0 1 0
chr17:50189397|50189525 hsa-miR-3121-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:50189397|50189525
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MALLVLLAKKAAKVPVVRLALLDVLVKLVPLVPLALLARKDP
Nucleotide Sequence CTGGCCCTCCTGGTCCTGCTGGCAAAGAAGGCGGCAAAGGTCCCCGTGGTGAGACTGGCCCTGCTGGACGTCCTGGTGAAGTTGGTCCCCCTGGTCCCCCTGGCCCTGCTGGCGAGAAAGGATCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites