CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50189714|50190053
Strand -
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence CAGGGAAACCAGTAGCACCCTGGAAGGAGAGAACATAGGAACAGTCAGAGGGAGAACAGCCAACTCATCCGACCCAGCTGCCCTCACCTGCCACCGCTGCCTGGGGAGAGGGGAGAGGCTCAACAGAGAGGCGGGTGATACTCACAGGGGGACCAGCGCTGCCGCGAGCACCTTTGGCTCCAGGAGCACCAACATTACCCTGTAGGAGAGCACAGAGGCATCAAGCCTGGACCCGTCCTGGGTCCCAGCCCACCAGCCTCGTGGGCACAGAGGGCCAAGCCACTCACAATGGGGCCAGGGGGTCCAGCGGGTCCGGCAGGGCCAGGGGGACCAGCATCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50189714|50190053 hsa-miR-18a-5p 0 0 1
chr17:50189714|50190053 hsa-miR-18a-3p 0 0 1
chr17:50189714|50190053 hsa-miR-328-5p 0 0 1
chr17:50189714|50190053 hsa-miR-328-3p 0 0 1
chr17:50189714|50190053 hsa-miR-345-5p 0 0 1
chr17:50189714|50190053 hsa-miR-345-3p 0 0 1
chr17:50189714|50190053 hsa-miR-18b-5p 0 0 1
chr17:50189714|50190053 hsa-miR-18b-3p 0 0 1
chr17:50189714|50190053 hsa-miR-496 0 0 1
chr17:50189714|50190053 hsa-miR-571 0 0 1
chr17:50189714|50190053 hsa-miR-647 0 0 1
chr17:50189714|50190053 hsa-miR-541-5p 0 0 1
chr17:50189714|50190053 hsa-miR-541-3p 0 0 1
chr17:50189714|50190053 hsa-miR-943 0 1 1
chr17:50189714|50190053 hsa-miR-1291 0 1 1
chr17:50189714|50190053 hsa-miR-1255a 0 0 1
chr17:50189714|50190053 hsa-miR-1267 0 0 1
chr17:50189714|50190053 hsa-miR-125a-3p 0 1 1
chr17:50189714|50190053 hsa-miR-885-3p 1 1 1
chr17:50189714|50190053 hsa-miR-485-5p 0 0 1
chr17:50189714|50190053 hsa-miR-654-5p 0 0 1
chr17:50189714|50190053 hsa-miR-1207-3p 0 0 1
chr17:50189714|50190053 hsa-miR-331-3p 0 1 1
chr17:50189714|50190053 hsa-miR-409-3p 0 0 1
chr17:50189714|50190053 hsa-miR-337-3p 0 0 1
chr17:50189714|50190053 hsa-miR-1207-5p 1 0 1
chr17:50189714|50190053 hsa-miR-1274a 0 0 1
chr17:50189714|50190053 hsa-miR-886-5p 0 0 1
chr17:50189714|50190053 hsa-miR-642 0 0 1
chr17:50189714|50190053 hsa-miR-1255b 0 0 1
chr17:50189714|50190053 hsa-miR-138 0 0 1
chr17:50189714|50190053 hsa-miR-219-1-3p 0 0 1
chr17:50189714|50190053 hsa-miR-133b 0 1 0
chr17:50189714|50190053 hsa-miR-762 0 1 0
chr17:50189714|50190053 hsa-miR-663b 0 1 0
chr17:50189714|50190053 hsa-miR-2117 0 1 0
chr17:50189714|50190053 hsa-miR-711 0 1 0
chr17:50189714|50190053 hsa-miR-3183 0 1 0
chr17:50189714|50190053 hsa-miR-4313 1 1 0
chr17:50189714|50190053 hsa-miR-4254 0 1 0
chr17:50189714|50190053 hsa-miR-4289 0 1 0
chr17:50189714|50190053 hsa-miR-3665 1 1 0
chr17:50189714|50190053 hsa-miR-3907 0 1 0
chr17:50189714|50190053 hsa-miR-3937 0 1 0
chr17:50189714|50190053 hsa-miR-4469 1 1 0
chr17:50189714|50190053 hsa-miR-4498 0 1 0
chr17:50189714|50190053 hsa-miR-4505 0 1 0
chr17:50189714|50190053 hsa-miR-4507 1 0 0
chr17:50189714|50190053 hsa-miR-1587 1 0 0
chr17:50189714|50190053 hsa-miR-3960 1 0 0
chr17:50189714|50190053 hsa-miR-4682 1 0 0
chr17:50189714|50190053 hsa-miR-4692 0 1 0
chr17:50189714|50190053 hsa-miR-4710 1 1 0
chr17:50189714|50190053 hsa-miR-5787 1 0 0
chr17:50189714|50190053 hsa-miR-6131 0 1 0
chr17:50189714|50190053 hsa-miR-7974 1 0 0
chr17:50189714|50190053 hsa-miR-8072 1 0 0
chr17:50189714|50190053 hsa-miR-138-5p 0 1 0
chr17:50189714|50190053 hsa-miR-26b-3p 0 1 0
chr17:50189714|50190053 hsa-miR-140-5p 0 1 0
chr17:50189714|50190053 hsa-miR-370-3p 1 0 0
chr17:50189714|50190053 hsa-miR-6840-3p 0 1 0
chr17:50189714|50190053 hsa-miR-3194-3p 1 0 0
chr17:50189714|50190053 hsa-miR-323a-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6879-3p 1 0 0
chr17:50189714|50190053 hsa-miR-6861-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6892-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6880-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6820-5p 1 1 0
chr17:50189714|50190053 hsa-miR-6741-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6842-3p 1 0 0
chr17:50189714|50190053 hsa-miR-3189-5p 0 1 0
chr17:50189714|50190053 hsa-miR-6873-3p 1 1 0
chr17:50189714|50190053 hsa-miR-4728-3p 1 0 0
chr17:50189714|50190053 hsa-miR-7110-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6845-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6742-5p 0 1 0
chr17:50189714|50190053 hsa-miR-423-3p 1 0 0
chr17:50189714|50190053 hsa-miR-877-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6882-3p 1 0 0
chr17:50189714|50190053 hsa-miR-7109-3p 0 1 0
chr17:50189714|50190053 hsa-miR-1226-5p 1 1 0
chr17:50189714|50190053 hsa-miR-5001-3p 1 0 0
chr17:50189714|50190053 hsa-miR-7113-3p 1 0 0
chr17:50189714|50190053 hsa-miR-296-3p 1 0 0
chr17:50189714|50190053 hsa-miR-6823-5p 1 0 0
chr17:50189714|50190053 hsa-miR-7854-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6878-3p 1 0 0
chr17:50189714|50190053 hsa-miR-7111-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6780a-3p 0 1 0
chr17:50189714|50190053 hsa-miR-4640-3p 1 1 0
chr17:50189714|50190053 hsa-miR-4646-3p 1 0 0
chr17:50189714|50190053 hsa-miR-7152-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6804-3p 1 0 0
chr17:50189714|50190053 hsa-miR-1224-3p 1 0 0
chr17:50189714|50190053 hsa-miR-2276-5p 0 1 0
chr17:50189714|50190053 hsa-miR-6826-3p 0 1 0
chr17:50189714|50190053 hsa-miR-5088-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6859-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6802-3p 1 0 0
chr17:50189714|50190053 hsa-miR-204-5p 0 1 0
chr17:50189714|50190053 hsa-miR-6851-3p 0 1 0
chr17:50189714|50190053 hsa-miR-4652-3p 0 1 0
chr17:50189714|50190053 hsa-miR-133a-3p 0 1 0
chr17:50189714|50190053 hsa-miR-10400-5p 1 0 0
chr17:50189714|50190053 hsa-miR-4763-3p 1 0 0
chr17:50189714|50190053 hsa-miR-5001-5p 0 1 0
chr17:50189714|50190053 hsa-miR-3127-3p 1 0 0
chr17:50189714|50190053 hsa-miR-3620-5p 0 1 0
chr17:50189714|50190053 hsa-miR-4632-5p 1 1 0
chr17:50189714|50190053 hsa-miR-6729-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6846-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6848-5p 1 0 0
chr17:50189714|50190053 hsa-miR-1238-5p 0 1 0
chr17:50189714|50190053 hsa-miR-3940-5p 1 0 0
chr17:50189714|50190053 hsa-miR-5008-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6877-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6810-3p 1 0 0
chr17:50189714|50190053 hsa-miR-6775-3p 1 0 0
chr17:50189714|50190053 hsa-miR-3059-5p 1 0 0
chr17:50189714|50190053 hsa-miR-4723-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6751-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6769b-3p 0 1 0
chr17:50189714|50190053 hsa-miR-6819-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6823-3p 1 1 0
chr17:50189714|50190053 hsa-miR-6744-3p 0 1 0
chr17:50189714|50190053 hsa-miR-10394-5p 1 0 0
chr17:50189714|50190053 hsa-miR-6827-3p 1 0 0
chr17:50189714|50190053 hsa-miR-6737-3p 0 1 0
chr17:50189714|50190053 hsa-miR-7156-5p 1 1 0
chr17:50189714|50190053 hsa-miR-4735-3p 0 1 0
chr17:50189714|50190053 hsa-miR-202-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:50189714|50190053
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MGPSPPASWAQRAKPLTMGPGGPAGPAGPGGPAS
Nucleotide Sequence CTGGGTCCCAGCCCACCAGCCTCGTGGGCACAGAGGGCCAAGCCACTCACAATGGGGCCAGGGGGTCCAGCGGGTCCGGCAGGGCCAGGGGGACCAGCATCG

CircID chr17:50189714|50190053
ORF Type ORF2
Protein Length 61
Nucleotide Length 186
Protein Sequence MEGENIGTVRGRTANSSDPAALTCHRCLGRGERLNREAGDTHRGTSAAASTFGSRSTNITL
Nucleotide Sequence CTGGAAGGAGAGAACATAGGAACAGTCAGAGGGAGAACAGCCAACTCATCCGACCCAGCTGCCCTCACCTGCCACCGCTGCCTGGGGAGAGGGGAGAGGCTCAACAGAGAGGCGGGTGATACTCACAGGGGGACCAGCGCTGCCGCGAGCACCTTTGGCTCCAGGAGCACCAACATTACCCTGTAG

CircID chr17:50189714|50190053
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MDPSWVPAHQPRGHRGPSHSQWGQGVQRVRQGQGDQHR
Nucleotide Sequence CTGGACCCGTCCTGGGTCCCAGCCCACCAGCCTCGTGGGCACAGAGGGCCAAGCCACTCACAATGGGGCCAGGGGGTCCAGCGGGTCCGGCAGGGCCAGGGGGACCAGCATCGC

CircID chr17:50189714|50190053
ORF Type ORF4
Protein Length 87
Nucleotide Length 261
Protein Sequence MPSPATAAWGEGRGSTERRVILTGGPALPRAPLAPGAPTLPCRRAQRHQAWTRPGSQPTSLVGTEGQATHNGARGSSGSGRARGTSI
Nucleotide Sequence CTGCCCTCACCTGCCACCGCTGCCTGGGGAGAGGGGAGAGGCTCAACAGAGAGGCGGGTGATACTCACAGGGGGACCAGCGCTGCCGCGAGCACCTTTGGCTCCAGGAGCACCAACATTACCCTGTAGGAGAGCACAGAGGCATCAAGCCTGGACCCGTCCTGGGTCCCAGCCCACCAGCCTCGTGGGCACAGAGGGCCAAGCCACTCACAATGGGGCCAGGGGGTCCAGCGGGTCCGGCAGGGCCAGGGGGACCAGCATC

CircID chr17:50189714|50190053
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MCPRGWWAGTQDGSRLDASVLSYRVMLVLLEPKVLAAALVPL
Nucleotide Sequence CTGTGCCCACGAGGCTGGTGGGCTGGGACCCAGGACGGGTCCAGGCTTGATGCCTCTGTGCTCTCCTACAGGGTAATGTTGGTGCTCCTGGAGCCAAAGGTGCTCGCGGCAGCGCTGGTCCCCCTGTGA

CircID chr17:50189714|50190053
ORF Type ORF6
Protein Length 42
Nucleotide Length 126
Protein Sequence MLSLSPLPRQRWQVRAAGSDELAVLPLTVPMFSPSRVLLVSL
Nucleotide Sequence CTGTTGAGCCTCTCCCCTCTCCCCAGGCAGCGGTGGCAGGTGAGGGCAGCTGGGTCGGATGAGTTGGCTGTTCTCCCTCTGACTGTTCCTATGTTCTCTCCTTCCAGGGTGCTACTGGTTTCCCTG

CircID chr17:50189714|50190053
ORF Type ORF7
Protein Length 27
Nucleotide Length 84
Protein Sequence MALCAHEAGGLGPRTGPGLMPLCSPTG
Nucleotide Sequence TTGGCCCTCTGTGCCCACGAGGCTGGTGGGCTGGGACCCAGGACGGGTCCAGGCTTGATGCCTCTGTGCTCTCCTACAGGGTAA

CircID chr17:50189714|50190053
ORF Type ORF1
Protein Length 77
Nucleotide Length 231
Protein Sequence MEGENIGTVRGRTANSSDPAALTCHRCLGRGERLNREAGDTHRGTSAAASTFGSRSTNITNGARGSSGSGRARGTSI
Nucleotide Sequence CTGGAAGGAGAGAACATAGGAACAGTCAGAGGGAGAACAGCCAACTCATCCGACCCAGCTGCCCTCACCTGCCACCGCTGCCTGGGGAGAGGGGAGAGGCTCAACAGAGAGGCGGGTGATACTCACAGGGGGACCAGCGCTGCCGCGAGCACCTTTGGCTCCAGGAGCACCAACATTACCAATGGGGCCAGGGGGTCCAGCGGGTCCGGCAGGGCCAGGGGGACCAGCATC

CircID chr17:50189714|50190053
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MPSPATAAWGEGRGSTERRVILTGGPALPRAPLAPGAPTLPMGPGGPAGPAGPGGPAS
Nucleotide Sequence CTGCCCTCACCTGCCACCGCTGCCTGGGGAGAGGGGAGAGGCTCAACAGAGAGGCGGGTGATACTCACAGGGGGACCAGCGCTGCCGCGAGCACCTTTGGCTCCAGGAGCACCAACATTACCAATGGGGCCAGGGGGTCCAGCGGGTCCGGCAGGGCCAGGGGGACCAGCATCG

CircID chr17:50189714|50190053
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MLVPLALPDPLDPLAPLVMLVLLEPKVLAAALVPL
Nucleotide Sequence ATGCTGGTCCCCCTGGCCCTGCCGGACCCGCTGGACCCCCTGGCCCCATTGGTAATGTTGGTGCTCCTGGAGCCAAAGGTGCTCGCGGCAGCGCTGGTCCCCCTGTGA

CircID chr17:50189714|50190053
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MLSLSPLPRQRWQVRAAGSDELAVLPLTVPMFSPSRVLLVSL
Nucleotide Sequence CTGTTGAGCCTCTCCCCTCTCCCCAGGCAGCGGTGGCAGGTGAGGGCAGCTGGGTCGGATGAGTTGGCTGTTCTCCCTCTGACTGTTCCTATGTTCTCTCCTTCCAGGGTGCTACTGGTTTCCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites