CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50194130|50194447
Strand -
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence AGGGGGGCCAGTTTTGCCATCAGGACCAGGGCTGCCAGGGCTTCCAGTCAGACCCTAGGGAGGCAGAGAGGTATGAGTGGGACTTGGGGAGAAGCATGATGGAGGTGGGGGAGGACTCCAGAGGGCAGACCCTTGGGCCTGATCCAGAACGCCTCATCCCAGACCCTACACGGGATGGTCAGGGCCTGGCCAAGCCAGGCTGAAAGCCTGGGGCCTCACCTTGGCACCAGGCAGACCAGCTTCACCGGGACGACCAGCTTCACCAGGAGATCCTTTGGGGCCAGCAGGGCCAGGAGAACCACGTTCACCAGCGGGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50194130|50194447 hsa-miR-370-5p 0 0 1
chr17:50194130|50194447 hsa-miR-370-3p 0 0 1
chr17:50194130|50194447 hsa-miR-328-5p 0 0 1
chr17:50194130|50194447 hsa-miR-328-3p 0 0 1
chr17:50194130|50194447 hsa-miR-345-5p 0 0 1
chr17:50194130|50194447 hsa-miR-345-3p 0 0 1
chr17:50194130|50194447 hsa-miR-346 0 1 1
chr17:50194130|50194447 hsa-miR-193b-5p 0 0 1
chr17:50194130|50194447 hsa-miR-193b-3p 0 0 1
chr17:50194130|50194447 hsa-miR-588 0 0 1
chr17:50194130|50194447 hsa-miR-591 0 0 1
chr17:50194130|50194447 hsa-miR-661 1 0 1
chr17:50194130|50194447 hsa-miR-1323 0 0 1
chr17:50194130|50194447 hsa-miR-1182 0 1 1
chr17:50194130|50194447 hsa-miR-548e-5p 0 0 1
chr17:50194130|50194447 hsa-miR-548e-3p 0 0 1
chr17:50194130|50194447 hsa-miR-1291 0 1 1
chr17:50194130|50194447 hsa-miR-1299 0 0 1
chr17:50194130|50194447 hsa-miR-1255a 0 0 1
chr17:50194130|50194447 hsa-miR-548o-3p 0 0 1
chr17:50194130|50194447 hsa-miR-548o 0 0 1
chr17:50194130|50194447 hsa-miR-127-5p 0 0 1
chr17:50194130|50194447 hsa-miR-671-5p 1 1 1
chr17:50194130|50194447 hsa-miR-885-3p 0 0 1
chr17:50194130|50194447 hsa-miR-1289 0 0 1
chr17:50194130|50194447 hsa-miR-361-3p 0 0 1
chr17:50194130|50194447 hsa-miR-1224-3p 1 1 1
chr17:50194130|50194447 hsa-miR-875-5p 0 0 1
chr17:50194130|50194447 hsa-miR-324-3p 0 0 1
chr17:50194130|50194447 hsa-miR-193a-3p 0 0 1
chr17:50194130|50194447 hsa-miR-548a-3p 0 1 1
chr17:50194130|50194447 hsa-miR-1255b 0 0 1
chr17:50194130|50194447 hsa-miR-138 0 0 1
chr17:50194130|50194447 hsa-miR-548f 0 0 1
chr17:50194130|50194447 hsa-miR-516b 0 0 1
chr17:50194130|50194447 hsa-miR-1254 0 0 1
chr17:50194130|50194447 hsa-miR-326 0 1 0
chr17:50194130|50194447 hsa-miR-637 1 0 0
chr17:50194130|50194447 hsa-miR-1260a 1 0 0
chr17:50194130|50194447 hsa-miR-1913 1 0 0
chr17:50194130|50194447 hsa-miR-548q 0 1 0
chr17:50194130|50194447 hsa-miR-1260b 1 0 0
chr17:50194130|50194447 hsa-miR-4312 1 0 0
chr17:50194130|50194447 hsa-miR-4254 0 1 0
chr17:50194130|50194447 hsa-miR-4281 1 0 0
chr17:50194130|50194447 hsa-miR-3621 1 0 0
chr17:50194130|50194447 hsa-miR-3943 0 1 0
chr17:50194130|50194447 hsa-miR-4449 1 0 0
chr17:50194130|50194447 hsa-miR-4515 1 1 0
chr17:50194130|50194447 hsa-miR-5193 1 1 0
chr17:50194130|50194447 hsa-miR-5706 0 1 0
chr17:50194130|50194447 hsa-miR-6131 0 1 0
chr17:50194130|50194447 hsa-miR-8073 0 1 0
chr17:50194130|50194447 hsa-miR-8075 1 0 0
chr17:50194130|50194447 hsa-miR-12115 1 0 0
chr17:50194130|50194447 hsa-miR-12116 1 0 0
chr17:50194130|50194447 hsa-miR-4435 0 1 0
chr17:50194130|50194447 hsa-miR-6749-3p 1 1 0
chr17:50194130|50194447 hsa-miR-18a-3p 0 1 0
chr17:50194130|50194447 hsa-miR-4726-3p 1 1 0
chr17:50194130|50194447 hsa-miR-6765-5p 1 1 0
chr17:50194130|50194447 hsa-miR-6836-3p 0 1 0
chr17:50194130|50194447 hsa-miR-6892-3p 1 0 0
chr17:50194130|50194447 hsa-miR-3692-5p 0 1 0
chr17:50194130|50194447 hsa-miR-5187-5p 0 1 0
chr17:50194130|50194447 hsa-miR-6089 1 0 0
chr17:50194130|50194447 hsa-miR-4755-3p 0 1 0
chr17:50194130|50194447 hsa-miR-874-5p 0 1 0
chr17:50194130|50194447 hsa-miR-6873-3p 0 1 0
chr17:50194130|50194447 hsa-miR-6817-3p 0 1 0
chr17:50194130|50194447 hsa-miR-3663-5p 1 1 0
chr17:50194130|50194447 hsa-miR-2467-5p 0 1 0
chr17:50194130|50194447 hsa-miR-7855-5p 0 1 0
chr17:50194130|50194447 hsa-miR-5008-5p 0 1 0
chr17:50194130|50194447 hsa-miR-3691-3p 1 1 0
chr17:50194130|50194447 hsa-miR-4713-5p 1 0 0
chr17:50194130|50194447 hsa-miR-532-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6884-3p 1 0 0
chr17:50194130|50194447 hsa-miR-939-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6763-3p 1 0 0
chr17:50194130|50194447 hsa-miR-4786-3p 1 0 0
chr17:50194130|50194447 hsa-miR-1229-5p 1 0 0
chr17:50194130|50194447 hsa-miR-4783-3p 1 0 0
chr17:50194130|50194447 hsa-miR-5001-3p 1 1 0
chr17:50194130|50194447 hsa-miR-7111-3p 1 1 0
chr17:50194130|50194447 hsa-miR-605-5p 1 0 0
chr17:50194130|50194447 hsa-miR-7152-3p 0 1 0
chr17:50194130|50194447 hsa-miR-1236-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6743-3p 1 0 0
chr17:50194130|50194447 hsa-miR-4732-3p 0 1 0
chr17:50194130|50194447 hsa-miR-629-3p 0 1 0
chr17:50194130|50194447 hsa-miR-597-3p 0 1 0
chr17:50194130|50194447 hsa-miR-6778-3p 0 1 0
chr17:50194130|50194447 hsa-miR-6814-5p 0 1 0
chr17:50194130|50194447 hsa-miR-6872-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6777-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6880-3p 1 0 0
chr17:50194130|50194447 hsa-miR-3184-3p 1 1 0
chr17:50194130|50194447 hsa-miR-4433a-5p 1 0 0
chr17:50194130|50194447 hsa-miR-188-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6779-3p 0 1 0
chr17:50194130|50194447 hsa-miR-4433b-5p 1 0 0
chr17:50194130|50194447 hsa-miR-6734-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6800-3p 1 0 0
chr17:50194130|50194447 hsa-miR-3162-3p 1 0 0
chr17:50194130|50194447 hsa-miR-3156-3p 1 1 0
chr17:50194130|50194447 hsa-miR-4740-3p 1 0 0
chr17:50194130|50194447 hsa-miR-4763-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6865-5p 1 0 0
chr17:50194130|50194447 hsa-miR-6726-5p 1 0 0
chr17:50194130|50194447 hsa-miR-6756-5p 1 0 0
chr17:50194130|50194447 hsa-miR-186-3p 0 1 0
chr17:50194130|50194447 hsa-miR-3085-5p 1 1 0
chr17:50194130|50194447 hsa-miR-6799-3p 1 1 0
chr17:50194130|50194447 hsa-miR-10398-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6791-5p 1 0 0
chr17:50194130|50194447 hsa-miR-6753-3p 1 1 0
chr17:50194130|50194447 hsa-miR-6893-3p 0 1 0
chr17:50194130|50194447 hsa-miR-769-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6756-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6792-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6862-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6775-3p 1 1 0
chr17:50194130|50194447 hsa-miR-3059-5p 1 1 0
chr17:50194130|50194447 hsa-miR-4723-3p 1 1 0
chr17:50194130|50194447 hsa-miR-6769b-3p 0 1 0
chr17:50194130|50194447 hsa-miR-3085-3p 1 0 0
chr17:50194130|50194447 hsa-miR-4768-5p 0 1 0
chr17:50194130|50194447 hsa-miR-323b-5p 1 1 0
chr17:50194130|50194447 hsa-miR-6824-3p 1 0 0
chr17:50194130|50194447 hsa-miR-6503-5p 0 1 0
chr17:50194130|50194447 hsa-miR-6806-3p 0 1 0
chr17:50194130|50194447 hsa-miR-876-5p 0 1 0
chr17:50194130|50194447 hsa-miR-5588-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:50194130|50194447
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MGLIQNASSQTLHGMVRAWPSQAESLGPHLGTRQTSFTGTTSFTRRSFGASRARRTTFTSGT
Nucleotide Sequence TTGGGCCTGATCCAGAACGCCTCATCCCAGACCCTACACGGGATGGTCAGGGCCTGGCCAAGCCAGGCTGAAAGCCTGGGGCCTCACCTTGGCACCAGGCAGACCAGCTTCACCGGGACGACCAGCTTCACCAGGAGATCCTTTGGGGCCAGCAGGGCCAGGAGAACCACGTTCACCAGCGGGACC
CircID chr17:50194130|50194447
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MKAWGLTLAPGRPASPGRPASPGDPLGPAGPGEPRSPAG
Nucleotide Sequence CTGAAAGCCTGGGGCCTCACCTTGGCACCAGGCAGACCAGCTTCACCGGGACGACCAGCTTCACCAGGAGATCCTTTGGGGCCAGCAGGGCCAGGAGAACCACGTTCACCAGCGGGA
CircID chr17:50194130|50194447
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MGRSMMEVGEDSRGQTLGPDPERLIPDPTRDGQGLAKPG
Nucleotide Sequence TTGGGGAGAAGCATGATGGAGGTGGGGGAGGACTCCAGAGGGCAGACCCTTGGGCCTGATCCAGAACGCCTCATCCCAGACCCTACACGGGATGGTCAGGGCCTGGCCAAGCCAGGCTGA
CircID chr17:50194130|50194447
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MDQAQGSALWSPPPPPSCFSPSPTHTSLPP
Nucleotide Sequence CTGGATCAGGCCCAAGGGTCTGCCCTCTGGAGTCCTCCCCCACCTCCATCATGCTTCTCCCCAAGTCCCACTCATACCTCTCTGCCTCCCTAG
CircID chr17:50194130|50194447
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MVNVVLLALLAPKDLLVKLVVPVKLVCLVPR
Nucleotide Sequence CTGGTGAACGTGGTTCTCCTGGCCCTGCTGGCCCCAAAGGATCTCCTGGTGAAGCTGGTCGTCCCGGTGAAGCTGGTCTGCCTGGTGCCAAGGTGA
CircID chr17:50194130|50194447
ORF Type ORF6
Protein Length 44
Nucleotide Length 135
Protein Sequence MTIPCRVWDEAFWIRPKGLPSGVLPHLHHASPQVPLIPLCLPRV
Nucleotide Sequence CTGACCATCCCGTGTAGGGTCTGGGATGAGGCGTTCTGGATCAGGCCCAAGGGTCTGCCCTCTGGAGTCCTCCCCCACCTCCATCATGCTTCTCCCCAAGTCCCACTCATACCTCTCTGCCTCCCTAGGGTCTGA
CircID chr17:50194130|50194447
ORF Type ORF7
Protein Length 45
Nucleotide Length 138
Protein Sequence MRRSGSGPRVCPLESSPTSIMLLPKSHSYLSASLGSDWKPWQPWS
Nucleotide Sequence ATGAGGCGTTCTGGATCAGGCCCAAGGGTCTGCCCTCTGGAGTCCTCCCCCACCTCCATCATGCTTCTCCCCAAGTCCCACTCATACCTCTCTGCCTCCCTAGGGTCTGACTGGAAGCCCTGGCAGCCCTGGTCCTGA
CircID chr17:50194130|50194447
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MPSGPGLPGLPVRPLAPGRPASPGRPASPGDPLGPAGPGEPRSPAG
Nucleotide Sequence TTGCCATCAGGACCAGGGCTGCCAGGGCTTCCAGTCAGACCCTTGGCACCAGGCAGACCAGCTTCACCGGGACGACCAGCTTCACCAGGAGATCCTTTGGGGCCAGCAGGGCCAGGAGAACCACGTTCACCAGCGGGA
CircID chr17:50194130|50194447
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MVNVVLLALLAPKDLLVKLVVPVKLVCLVPRV
Nucleotide Sequence CTGGTGAACGTGGTTCTCCTGGCCCTGCTGGCCCCAAAGGATCTCCTGGTGAAGCTGGTCGTCCCGGTGAAGCTGGTCTGCCTGGTGCCAAGGGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab