CircRNA Information

General Information
circRNA Basic Information
CircID chr17:50194573|50194782
Strand -
CircType exon
Host Gene ENSG00000108821.12;
Algorism CIRI2;
Sequence CTTGGGACCAGCAACACCATCTGCGCCAGGGAAACCACGGCTACCAGGTCCACCCTGCAGGAGGAGAGGAGGCCAGTGAACTCCGCGACACACAGGCACCAGCCAGGCAATGAGGGTGGAGCGGGAGGGGGCGGGCAGGGACACTTACACGCTCGCCAGGGGGTCCGGGCAGGCCAGTGGGTCCGGGTTCACCTCGAGCTCCTCGCTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:50194573|50194782 hsa-miR-492 0 0 1
chr17:50194573|50194782 hsa-miR-193b-5p 0 0 1
chr17:50194573|50194782 hsa-miR-193b-3p 0 0 1
chr17:50194573|50194782 hsa-miR-595 0 0 1
chr17:50194573|50194782 hsa-miR-631 0 0 1
chr17:50194573|50194782 hsa-miR-661 1 0 1
chr17:50194573|50194782 hsa-miR-708-5p 0 0 1
chr17:50194573|50194782 hsa-miR-708-3p 0 0 1
chr17:50194573|50194782 hsa-miR-1205 0 0 1
chr17:50194573|50194782 hsa-miR-28-5p 0 0 1
chr17:50194573|50194782 hsa-miR-331-3p 0 0 1
chr17:50194573|50194782 hsa-miR-193a-3p 0 0 1
chr17:50194573|50194782 hsa-miR-151-5p 0 0 1
chr17:50194573|50194782 hsa-miR-1274a 0 0 1
chr17:50194573|50194782 hsa-miR-550 0 0 1
chr17:50194573|50194782 hsa-miR-138 0 0 1
chr17:50194573|50194782 hsa-miR-1254 0 0 1
chr17:50194573|50194782 hsa-miR-346 1 0 0
chr17:50194573|50194782 hsa-miR-596 1 0 0
chr17:50194573|50194782 hsa-miR-636 1 0 0
chr17:50194573|50194782 hsa-miR-151b 0 1 0
chr17:50194573|50194782 hsa-miR-1281 0 1 0
chr17:50194573|50194782 hsa-miR-1913 1 0 0
chr17:50194573|50194782 hsa-miR-3139 0 1 0
chr17:50194573|50194782 hsa-miR-3176 0 1 0
chr17:50194573|50194782 hsa-miR-3661 0 1 0
chr17:50194573|50194782 hsa-miR-4440 1 0 0
chr17:50194573|50194782 hsa-miR-4535 0 1 0
chr17:50194573|50194782 hsa-miR-4767 1 0 0
chr17:50194573|50194782 hsa-miR-5193 0 1 0
chr17:50194573|50194782 hsa-miR-138-5p 0 1 0
chr17:50194573|50194782 hsa-miR-370-3p 1 0 0
chr17:50194573|50194782 hsa-miR-210-5p 1 0 0
chr17:50194573|50194782 hsa-miR-29b-2-5p 0 1 0
chr17:50194573|50194782 hsa-miR-8071 0 1 0
chr17:50194573|50194782 hsa-miR-3064-5p 0 1 0
chr17:50194573|50194782 hsa-miR-6842-3p 0 1 0
chr17:50194573|50194782 hsa-miR-3189-5p 1 0 0
chr17:50194573|50194782 hsa-miR-6845-3p 0 1 0
chr17:50194573|50194782 hsa-miR-4725-5p 1 0 0
chr17:50194573|50194782 hsa-miR-877-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6774-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6735-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6882-3p 1 0 0
chr17:50194573|50194782 hsa-miR-4793-5p 1 0 0
chr17:50194573|50194782 hsa-miR-4763-5p 1 0 0
chr17:50194573|50194782 hsa-miR-7108-3p 0 1 0
chr17:50194573|50194782 hsa-miR-4707-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6894-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6757-3p 1 0 0
chr17:50194573|50194782 hsa-miR-7113-3p 1 0 0
chr17:50194573|50194782 hsa-miR-3191-5p 1 0 0
chr17:50194573|50194782 hsa-miR-7854-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6878-3p 1 0 0
chr17:50194573|50194782 hsa-miR-7111-3p 0 1 0
chr17:50194573|50194782 hsa-miR-4446-5p 1 0 0
chr17:50194573|50194782 hsa-miR-4646-3p 1 0 0
chr17:50194573|50194782 hsa-miR-4707-5p 1 0 0
chr17:50194573|50194782 hsa-miR-6811-3p 0 1 0
chr17:50194573|50194782 hsa-miR-660-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6887-3p 0 1 0
chr17:50194573|50194782 hsa-miR-1180-5p 0 1 0
chr17:50194573|50194782 hsa-miR-6752-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6513-3p 1 0 0
chr17:50194573|50194782 hsa-miR-3940-3p 1 0 0
chr17:50194573|50194782 hsa-miR-4632-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6865-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6886-3p 1 0 0
chr17:50194573|50194782 hsa-miR-653-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6859-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6880-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6748-3p 0 1 0
chr17:50194573|50194782 hsa-miR-3173-5p 1 0 0
chr17:50194573|50194782 hsa-miR-4433b-5p 1 0 0
chr17:50194573|50194782 hsa-miR-6756-5p 1 0 0
chr17:50194573|50194782 hsa-miR-3127-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6754-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6836-5p 1 0 0
chr17:50194573|50194782 hsa-miR-6777-5p 1 0 0
chr17:50194573|50194782 hsa-miR-1271-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6791-3p 0 1 0
chr17:50194573|50194782 hsa-miR-4722-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6893-3p 1 0 0
chr17:50194573|50194782 hsa-miR-6756-3p 0 1 0
chr17:50194573|50194782 hsa-miR-6744-3p 1 0 0
chr17:50194573|50194782 hsa-miR-10394-5p 1 0 0
chr17:50194573|50194782 hsa-miR-6504-5p 0 1 0
chr17:50194573|50194782 hsa-miR-151a-5p 0 1 0
chr17:50194573|50194782 hsa-miR-6843-3p 1 0 0
chr17:50194573|50194782 hsa-miR-1912-5p 0 1 0
chr17:50194573|50194782 hsa-miR-3922-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:50194573|50194782
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MQEERRPVNSATHRHQPGNEGGAGGGGQGHLHARQGVRAGQWVRVHLELLAF
Nucleotide Sequence CTGCAGGAGGAGAGGAGGCCAGTGAACTCCGCGACACACAGGCACCAGCCAGGCAATGAGGGTGGAGCGGGAGGGGGCGGGCAGGGACACTTACACGCTCGCCAGGGGGTCCGGGCAGGCCAGTGGGTCCGGGTTCACCTCGAGCTCCTCGCTTTC
CircID chr17:50194573|50194782
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence LGPATPSAPGKPRLPGPPCRRRGGQ
Nucleotide Sequence TTGGGACCAGCAACACCATCTGCGCCAGGGAAACCACGGCTACCAGGTCCACCCTGCAGGAGGAGAGGAGGCCAGTGA
CircID chr17:50194573|50194782
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MRVEREGAGRDTYTLARGSGQASGSGFTSSSSL
Nucleotide Sequence ATGAGGGTGGAGCGGGAGGGGGCGGGCAGGGACACTTACACGCTCGCCAGGGGGTCCGGGCAGGCCAGTGGGTCCGGGTTCACCTCGAGCTCCTCGCTT
CircID chr17:50194573|50194782
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MRQGNHGYQVHPAGGEEASELRDTQAPARQ
Nucleotide Sequence CTGCGCCAGGGAAACCACGGCTACCAGGTCCACCCTGCAGGAGGAGAGGAGGCCAGTGAACTCCGCGACACACAGGCACCAGCCAGGCAATGA
CircID chr17:50194573|50194782
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MPAPSRSTLIAWLVPVCRGVHWPPLLLQGGPGSRGFPGADGVAGPK
Nucleotide Sequence CTGCCCGCCCCCTCCCGCTCCACCCTCATTGCCTGGCTGGTGCCTGTGTGTCGCGGAGTTCACTGGCCTCCTCTCCTCCTGCAGGGTGGACCTGGTAGCCGTGGTTTCCCTGGCGCAGATGGTGTTGCTGGTCCCAAG
CircID chr17:50194573|50194782
ORF Type ORF6
Protein Length 36
Nucleotide Length 108
Protein Sequence MPGWCLCVAEFTGLLSSCRVDLVAVVSLAQMVLLVP
Nucleotide Sequence TTGCCTGGCTGGTGCCTGTGTGTCGCGGAGTTCACTGGCCTCCTCTCCTCCTGCAGGGTGGACCTGGTAGCCGTGGTTTCCCTGGCGCAGATGGTGTTGCTGGTCCCA
CircID chr17:50194573|50194782
ORF Type ORF7
Protein Length 43
Nucleotide Length 132
Protein Sequence MPGPPGERVSVPARPLPLHPHCLAGACVSRSSLASSPPAGWTW
Nucleotide Sequence CTGCCCGGACCCCCTGGCGAGCGTGTAAGTGTCCCTGCCCGCCCCCTCCCGCTCCACCCTCATTGCCTGGCTGGTGCCTGTGTGTCGCGGAGTTCACTGGCCTCCTCTCCTCCTGCAGGGTGGACCTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab