CircNet

General Information

circRNA Basic Information

CircID	chr17:5361208\|5363016
Strand	+
CircType	exon
Host Gene	ENSG00000029725.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGCATTTAGACAGCACCCGTGGCTCAGTTCATTCCTTAGATGCAGGCTTGCTGTTGCCATCTGGAGATCCTTTCAGTAAATCGGACAATGACATGTTTAAAGATGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCGGGCTCATTGCAATCCAAAGCTTTAGGCTATAACTACAAAGCAAAATCTGCTGGAAACCTGGACGAGTCAGATTTTGGACCACTGGTAGGAGCAGATTCAGTGTCTGAGAACTTTGATACTGCATCCCTTGGGTCACTCCAGATGCCAAGTGGGTTTATGTTAACCAAAGATCAGGAAAGAGCAATCAAGGCGATGACACCAGAACAAGAAGAGACAGCGTCCCTCCTCTCCAGCGTTACCCAGGGCATGGAGAGTGCCTATGTGTCCCCTAGTGGTTATCGTTTAGTTAGTGAAACAGAATGGAATCTCTTGCAGAAAGAGGTACATAATGCTGGAAATAAACTTGGTAGACGTTGTGATATGTGTTCCAATTACGAAAAACAGTTACAAGGAATTCAGATTCAGGAGGCTGAAACGAGAGACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr17:5361208\|5363016	hsa-miR-196a-3p	1	1
chr17:5361208\|5363016	hsa-miR-100-3p	1	1
chr17:5361208\|5363016	hsa-miR-148a-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:5361208\|5363016
ORF Type	ORF1
Protein Length	160
Nucleotide Length	480
Protein Sequence	MFKDGLRRAQSTDSLGTSGSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQ
Nucleotide Sequence	ATGTTTAAAGATGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCGGGCTCATTGCAATCCAAAGCTTTAGGCTATAACTACAAAGCAAAATCTGCTGGAAACCTGGACGAGTCAGATTTTGGACCACTGGTAGGAGCAGATTCAGTGTCTGAGAACTTTGATACTGCATCCCTTGGGTCACTCCAGATGCCAAGTGGGTTTATGTTAACCAAAGATCAGGAAAGAGCAATCAAGGCGATGACACCAGAACAAGAAGAGACAGCGTCCCTCCTCTCCAGCGTTACCCAGGGCATGGAGAGTGCCTATGTGTCCCCTAGTGGTTATCGTTTAGTTAGTGAAACAGAATGGAATCTCTTGCAGAAAGAGGTACATAATGCTGGAAATAAACTTGGTAGACGTTGTGATATGTGTTCCAATTACGAAAAACAGTTACAAGGAATTCAGATTCAGGAGGCTGAAACGAGAGACCAG

CircID	chr17:5361208\|5363016
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MQYQSSQTLNLLLPVVQNLTRPGFQQILLCSYSLKLWIAMSPRFPSCL*
Nucleotide Sequence	ATGCAGTATCAAAGTTCTCAGACACTGAATCTGCTCCTACCAGTGGTCCAAAATCTGACTCGTCCAGGTTTCCAGCAGATTTTGCTTTGTAGTTATAGCCTAAAGCTTTGGATTGCAATGAGCCCGAGGTTCCCAAGCTGTCTGTAG

CircID	chr17:5361208\|5363016
ORF Type	ORF3
Protein Length	44
Nucleotide Length	132
Protein Sequence	MQACCCHLEILSVNRTMTCLKMDSGEHSLQTAWEPRAHCNPKL*
Nucleotide Sequence	ATGCAGGCTTGCTGTTGCCATCTGGAGATCCTTTCAGTAAATCGGACAATGACATGTTTAAAGATGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCGGGCTCATTGCAATCCAAAGCTTTAG

CircID	chr17:5361208\|5363016
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MLEINLVDVVICVPITKNSYKEFRFRRLKRET
Nucleotide Sequence	ATGCTGGAAATAAACTTGGTAGACGTTGTGATATGTGTTCCAATTACGAAAAACAGTTACAAGGAATTCAGATTCAGGAGGCTGAAACGAGAGACC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:5361208\|5363016	NOP56	0	1	0
chr17:5361208\|5363016	ELAVL1	2	3	6
chr17:5361208\|5363016	DHX9	0	2	1
chr17:5361208\|5363016	SF3B4	1	0	0
chr17:5361208\|5363016	CNBP	0	0	1
chr17:5361208\|5363016	UPF1	0	1	0
chr17:5361208\|5363016	SRSF10	1	0	0
chr17:5361208\|5363016	FMR1	0	0	22
chr17:5361208\|5363016	FUS	0	1	0
chr17:5361208\|5363016	DGCR8	0	0	1
chr17:5361208\|5363016	SRSF1	0	2	3
chr17:5361208\|5363016	NOP58	1	0	6
chr17:5361208\|5363016	ADAR	2	0	0
chr17:5361208\|5363016	U2AF2	3	0	2
chr17:5361208\|5363016	SRSF9	0	0	2
chr17:5361208\|5363016	DDX54	1	1	14
chr17:5361208\|5363016	RBM10	2	0	0
chr17:5361208\|5363016	PTBP1	3	0	2
chr17:5361208\|5363016	TRA2A	0	0	2
chr17:5361208\|5363016	ZNF184	0	0	2
chr17:5361208\|5363016	ZC3H7B	0	0	1
chr17:5361208\|5363016	SMNDC1	1	0	0
chr17:5361208\|5363016	MSI2	0	0	3
chr17:5361208\|5363016	ACIN1	0	0	2
chr17:5361208\|5363016	RANGAP1	0	0	1
chr17:5361208\|5363016	FXR1	0	0	3
chr17:5361208\|5363016	FXR2	0	1	4
chr17:5361208\|5363016	IGF2BP1	0	0	3
chr17:5361208\|5363016	IGF2BP3	0	0	3
chr17:5361208\|5363016	IGF2BP2	2	0	10
chr17:5361208\|5363016	ELAVL3	0	1	0
chr17:5361208\|5363016	TARDBP	0	0	2
chr17:5361208\|5363016	BUD13	1	0	2
chr17:5361208\|5363016	RBFOX2	0	0	1
chr17:5361208\|5363016	PRPF8	0	0	1
chr17:5361208\|5363016	RTCB	0	0	1
chr17:5361208\|5363016	RBM47	0	0	1
chr17:5361208\|5363016	CSTF2T	1	0	2
chr17:5361208\|5363016	VIM	0	0	1
chr17:5361208\|5363016	EIF4G2	0	0	1
chr17:5361208\|5363016	FBL	0	0	5
chr17:5361208\|5363016	AGO1	0	0	2
chr17:5361208\|5363016	EIF4A3	1	2	7
chr17:5361208\|5363016	AGO2	1	0	8

CircRNA Information