CircRNA Information

General Information
circRNA Basic Information
CircID chr17:57105766|57105908
Strand -
CircType exon
Host Gene ENSG00000121057.11;
Algorism CIRI2;
Sequence CTTGCCGAAGATCAGAGTCCTCGGGCATTCTTCCTAACACCACAGACATGAGATTGCGACCAGGAACACGCAGAGATGACAGTACAAAGCTGGAGCTAGCCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAGAGTGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:57105766|57105908 hsa-miR-197-5p 0 0 1
chr17:57105766|57105908 hsa-miR-197-3p 0 0 1
chr17:57105766|57105908 hsa-miR-216a-5p 0 0 1
chr17:57105766|57105908 hsa-miR-216a-3p 0 0 1
chr17:57105766|57105908 hsa-miR-412-5p 0 0 1
chr17:57105766|57105908 hsa-miR-412-3p 0 0 1
chr17:57105766|57105908 hsa-miR-611 0 0 1
chr17:57105766|57105908 hsa-miR-766-5p 0 0 1
chr17:57105766|57105908 hsa-miR-766-3p 0 0 1
chr17:57105766|57105908 hsa-miR-877-5p 0 0 1
chr17:57105766|57105908 hsa-miR-877-3p 0 0 1
chr17:57105766|57105908 hsa-miR-1258 0 0 1
chr17:57105766|57105908 hsa-miR-654-3p 0 0 1
chr17:57105766|57105908 hsa-miR-518d-5p 0 1 1
chr17:57105766|57105908 hsa-miR-519b-5p 0 1 1
chr17:57105766|57105908 hsa-miR-519c-5p 0 1 1
chr17:57105766|57105908 hsa-miR-520c-5p 0 1 1
chr17:57105766|57105908 hsa-miR-220b 0 0 1
chr17:57105766|57105908 hsa-miR-526a 0 0 1
chr17:57105766|57105908 hsa-miR-365 0 0 1
chr17:57105766|57105908 hsa-miR-3916 1 1 0
chr17:57105766|57105908 hsa-miR-4421 1 0 0
chr17:57105766|57105908 hsa-miR-4498 1 0 0
chr17:57105766|57105908 hsa-miR-5705 1 0 0
chr17:57105766|57105908 hsa-miR-215-3p 0 1 0
chr17:57105766|57105908 hsa-miR-512-3p 1 0 0
chr17:57105766|57105908 hsa-miR-1343-3p 1 0 0
chr17:57105766|57105908 hsa-miR-1307-3p 1 0 0
chr17:57105766|57105908 hsa-miR-744-5p 1 0 0
chr17:57105766|57105908 hsa-miR-518c-5p 1 0 0
chr17:57105766|57105908 hsa-miR-520g-5p 0 1 0
chr17:57105766|57105908 hsa-miR-4520-5p 1 1 0
chr17:57105766|57105908 hsa-miR-5001-5p 1 0 0
chr17:57105766|57105908 hsa-miR-518e-5p 0 1 0
chr17:57105766|57105908 hsa-miR-518f-5p 0 1 0
chr17:57105766|57105908 hsa-miR-519a-5p 0 1 0
chr17:57105766|57105908 hsa-miR-522-5p 0 1 0
chr17:57105766|57105908 hsa-miR-523-5p 0 1 0
chr17:57105766|57105908 hsa-miR-526a-5p 0 1 0
chr17:57105766|57105908 hsa-miR-99b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:57105766|57105908
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MRLRPGTRRDDSTKLELALTGGEAKSIPLECP
Nucleotide Sequence ATGAGATTGCGACCAGGAACACGCAGAGATGACAGTACAAAGCTGGAGCTAGCCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAGAGTGCCCC

CircID chr17:57105766|57105908
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MASPPVRASSSFVLSSLRVPGRNLMSVVLGRMPEDSDLRQ
Nucleotide Sequence TTGGCTTCACCACCTGTCAGGGCTAGCTCCAGCTTTGTACTGTCATCTCTGCGTGTTCCTGGTCGCAATCTCATGTCTGTGGTGTTAGGAAGAATGCCCGAGGACTCTGATCTTCGGCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites