CircNet

General Information

circRNA Basic Information

CircID	chr17:57628889\|57629022
Strand	-
CircType	exon
Host Gene	ENSG00000153944.9;
Algorism	CIRI2;
Sequence	CACCACAAGAGAGGCCAGCACTCAACCAGCCACTGTCATTAGACTTTCCCATTTCCAGGCAGAGACCCCCACCAGGCACAGGCACAGAGGTAGAAACTCCTTCTGAAGGGGTCACAGTACGCAAGGGGTAGGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:57628889\|57629022	hsa-miR-563	0	0	1
chr17:57628889\|57629022	hsa-miR-581	0	0	1
chr17:57628889\|57629022	hsa-miR-593-5p	0	0	1
chr17:57628889\|57629022	hsa-miR-593-3p	0	0	1
chr17:57628889\|57629022	hsa-miR-661	1	0	1
chr17:57628889\|57629022	hsa-miR-892a	0	0	1
chr17:57628889\|57629022	hsa-miR-541-5p	0	0	1
chr17:57628889\|57629022	hsa-miR-541-3p	0	0	1
chr17:57628889\|57629022	hsa-miR-512-3p	0	0	1
chr17:57628889\|57629022	hsa-miR-654-5p	0	0	1
chr17:57628889\|57629022	hsa-miR-875-3p	0	0	1
chr17:57628889\|57629022	hsa-miR-550	0	0	1
chr17:57628889\|57629022	hsa-miR-1254	0	0	1
chr17:57628889\|57629022	hsa-miR-4538	1	0	0
chr17:57628889\|57629022	hsa-miR-5093	1	0	0
chr17:57628889\|57629022	hsa-miR-138-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-92a-2-5p	0	1	0
chr17:57628889\|57629022	hsa-miR-7851-3p	1	0	0
chr17:57628889\|57629022	hsa-miR-6744-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-6741-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-4474-3p	1	0	0
chr17:57628889\|57629022	hsa-miR-6716-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-1292-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-185-3p	1	0	0
chr17:57628889\|57629022	hsa-miR-6835-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-5001-3p	0	1	0
chr17:57628889\|57629022	hsa-miR-6878-3p	0	1	0
chr17:57628889\|57629022	hsa-miR-193a-5p	0	1	0
chr17:57628889\|57629022	hsa-miR-550b-2-5p	0	1	0
chr17:57628889\|57629022	hsa-miR-3191-3p	1	0	0
chr17:57628889\|57629022	hsa-miR-6811-3p	1	1	0
chr17:57628889\|57629022	hsa-miR-1914-5p	0	1	0
chr17:57628889\|57629022	hsa-miR-6846-3p	0	1	0
chr17:57628889\|57629022	hsa-miR-4763-3p	1	0	0
chr17:57628889\|57629022	hsa-miR-6787-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-6756-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-6803-5p	1	1	0
chr17:57628889\|57629022	hsa-miR-7107-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-3127-3p	0	1	0
chr17:57628889\|57629022	hsa-miR-5196-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-6780b-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-4701-3p	1	0	0
chr17:57628889\|57629022	hsa-miR-6731-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-3116	0	1	0
chr17:57628889\|57629022	hsa-miR-4747-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-550a-3-5p	0	1	0
chr17:57628889\|57629022	hsa-miR-550a-5p	0	1	0
chr17:57628889\|57629022	hsa-miR-6529-3p	0	1	0
chr17:57628889\|57629022	hsa-miR-330-5p	1	0	0
chr17:57628889\|57629022	hsa-miR-6744-3p	0	1	0
chr17:57628889\|57629022	hsa-miR-520d-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:57628889\|57629022
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	MSLDFPISRQRPPPGTGTEVETPSEGVTVRKG
Nucleotide Sequence	CTGTCATTAGACTTTCCCATTTCCAGGCAGAGACCCCCACCAGGCACAGGCACAGAGGTAGAAACTCCTTCTGAAGGGGTCACAGTACGCAAGGGGTAG

CircID	chr17:57628889\|57629022
ORF Type	ORF2
Protein Length	41
Nucleotide Length	123
Protein Sequence	MRTVTPSEGVSTSVPVPGGGLCLEMGKSNDSGWLSAGLSCG
Nucleotide Sequence	TTGCGTACTGTGACCCCTTCAGAAGGAGTTTCTACCTCTGTGCCTGTGCCTGGTGGGGGTCTCTGCCTGGAAATGGGAAAGTCTAATGACAGTGGCTGGTTGAGTGCTGGCCTCTCTTGTGGT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information