CircRNA Information

General Information
circRNA Basic Information
CircID chr17:57862354|57862503
Strand -
CircType exon
Host Gene ENSG00000180891.11;
Algorism CIRI2;
Sequence CTGCTCAAAGGGGTCACTCCAGGACCCACCGCTGCCCACCCTCGGACAGCAGGGCTTCCAGTCCAGCTGGGGAGTCAGAGCCCCTGTGAGCCCCTACTGTGGTGTGACTCCAGAACTGGCTTTTGTCTGCTGCCAAATTAAAGACCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:57862354|57862503 hsa-miR-96-5p 0 0 1
chr17:57862354|57862503 hsa-miR-96-3p 0 0 1
chr17:57862354|57862503 hsa-miR-182-5p 0 0 1
chr17:57862354|57862503 hsa-miR-182-3p 0 0 1
chr17:57862354|57862503 hsa-miR-122-5p 0 0 1
chr17:57862354|57862503 hsa-miR-122-3p 0 0 1
chr17:57862354|57862503 hsa-miR-370-5p 0 0 1
chr17:57862354|57862503 hsa-miR-370-3p 0 0 1
chr17:57862354|57862503 hsa-miR-345-5p 0 0 1
chr17:57862354|57862503 hsa-miR-345-3p 0 0 1
chr17:57862354|57862503 hsa-miR-422a 0 0 1
chr17:57862354|57862503 hsa-miR-575 0 0 1
chr17:57862354|57862503 hsa-miR-626 0 0 1
chr17:57862354|57862503 hsa-miR-1271-5p 0 0 1
chr17:57862354|57862503 hsa-miR-1271-3p 0 0 1
chr17:57862354|57862503 hsa-miR-541-5p 0 0 1
chr17:57862354|57862503 hsa-miR-541-3p 0 0 1
chr17:57862354|57862503 hsa-miR-760 0 1 1
chr17:57862354|57862503 hsa-miR-922 0 1 1
chr17:57862354|57862503 hsa-miR-1182 0 0 1
chr17:57862354|57862503 hsa-miR-1228-5p 0 0 1
chr17:57862354|57862503 hsa-miR-1228-3p 0 0 1
chr17:57862354|57862503 hsa-miR-1299 0 0 1
chr17:57862354|57862503 hsa-miR-1288-5p 0 0 1
chr17:57862354|57862503 hsa-miR-1288-3p 0 0 1
chr17:57862354|57862503 hsa-miR-671-5p 1 1 1
chr17:57862354|57862503 hsa-miR-885-3p 0 1 1
chr17:57862354|57862503 hsa-miR-193a-5p 1 0 1
chr17:57862354|57862503 hsa-miR-1289 0 0 1
chr17:57862354|57862503 hsa-miR-654-5p 0 0 1
chr17:57862354|57862503 hsa-miR-1207-3p 0 0 1
chr17:57862354|57862503 hsa-miR-513a-5p 0 0 1
chr17:57862354|57862503 hsa-miR-140-3p 0 0 1
chr17:57862354|57862503 hsa-miR-220c 0 0 1
chr17:57862354|57862503 hsa-miR-378 0 0 1
chr17:57862354|57862503 hsa-miR-1269 0 0 1
chr17:57862354|57862503 hsa-miR-516b 0 0 1
chr17:57862354|57862503 hsa-miR-220a 0 0 1
chr17:57862354|57862503 hsa-miR-637 1 0 0
chr17:57862354|57862503 hsa-miR-1269a 0 1 0
chr17:57862354|57862503 hsa-miR-378b 0 1 0
chr17:57862354|57862503 hsa-miR-3166 0 1 0
chr17:57862354|57862503 hsa-miR-378c 0 1 0
chr17:57862354|57862503 hsa-miR-4254 0 1 0
chr17:57862354|57862503 hsa-miR-4277 0 1 0
chr17:57862354|57862503 hsa-miR-378e 0 1 0
chr17:57862354|57862503 hsa-miR-378f 0 1 0
chr17:57862354|57862503 hsa-miR-378h 0 1 0
chr17:57862354|57862503 hsa-miR-4515 0 1 0
chr17:57862354|57862503 hsa-miR-1269b 0 1 0
chr17:57862354|57862503 hsa-miR-378i 0 1 0
chr17:57862354|57862503 hsa-miR-4675 1 0 0
chr17:57862354|57862503 hsa-miR-4688 1 0 0
chr17:57862354|57862503 hsa-miR-8089 1 0 0
chr17:57862354|57862503 hsa-miR-12119 1 0 0
chr17:57862354|57862503 hsa-miR-6804-5p 0 1 0
chr17:57862354|57862503 hsa-miR-6759-5p 1 0 0
chr17:57862354|57862503 hsa-miR-503-5p 1 0 0
chr17:57862354|57862503 hsa-miR-6793-5p 0 1 0
chr17:57862354|57862503 hsa-miR-185-3p 1 0 0
chr17:57862354|57862503 hsa-miR-6786-5p 0 1 0
chr17:57862354|57862503 hsa-miR-5088-5p 1 0 0
chr17:57862354|57862503 hsa-miR-4786-3p 0 1 0
chr17:57862354|57862503 hsa-miR-6823-5p 1 0 0
chr17:57862354|57862503 hsa-miR-4787-5p 1 1 0
chr17:57862354|57862503 hsa-miR-6789-5p 1 1 0
chr17:57862354|57862503 hsa-miR-2355-5p 0 1 0
chr17:57862354|57862503 hsa-miR-6770-3p 1 0 0
chr17:57862354|57862503 hsa-miR-10400-5p 0 1 0
chr17:57862354|57862503 hsa-miR-4763-3p 1 0 0
chr17:57862354|57862503 hsa-miR-6737-5p 1 0 0
chr17:57862354|57862503 hsa-miR-6743-5p 1 0 0
chr17:57862354|57862503 hsa-miR-6756-5p 1 1 0
chr17:57862354|57862503 hsa-miR-6769a-5p 1 1 0
chr17:57862354|57862503 hsa-miR-6813-5p 1 1 0
chr17:57862354|57862503 hsa-miR-4632-5p 1 1 0
chr17:57862354|57862503 hsa-miR-4745-5p 1 0 0
chr17:57862354|57862503 hsa-miR-6848-5p 1 0 0
chr17:57862354|57862503 hsa-miR-3187-5p 1 0 0
chr17:57862354|57862503 hsa-miR-365a-5p 1 0 0
chr17:57862354|57862503 hsa-miR-365b-5p 1 0 0
chr17:57862354|57862503 hsa-miR-6511b-5p 1 0 0
chr17:57862354|57862503 hsa-miR-378a-3p 0 1 0
chr17:57862354|57862503 hsa-miR-4676-5p 0 1 0
chr17:57862354|57862503 hsa-miR-378d 0 1 0
chr17:57862354|57862503 hsa-miR-301a-5p 0 1 0
chr17:57862354|57862503 hsa-miR-148b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:57862354|57862503
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence LLKGVTPGPTAAHPRTAGLPVQLGSQSPCEPLLWCDSRTGFCLLPN
Nucleotide Sequence CTGCTCAAAGGGGTCACTCCAGGACCCACCGCTGCCCACCCTCGGACAGCAGGGCTTCCAGTCCAGCTGGGGAGTCAGAGCCCCTGTGAGCCCCTACTGTGGTGTGACTCCAGAACTGGCTTTTGTCTGCTGCCAAATTAA

CircID chr17:57862354|57862503
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MPTLGQQGFQSSWGVRAPVSPYCGVTPELAFVCCQIKDP
Nucleotide Sequence CTGCCCACCCTCGGACAGCAGGGCTTCCAGTCCAGCTGGGGAGTCAGAGCCCCTGTGAGCCCCTACTGTGGTGTGACTCCAGAACTGGCTTTTGTCTGCTGCCAAATTAAAGACCCT

CircID chr17:57862354|57862503
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MTPQLDWKPCCPRVGSGGSWSDPFEQ
Nucleotide Sequence CTGACTCCCCAGCTGGACTGGAAGCCCTGCTGTCCGAGGGTGGGCAGCGGTGGGTCCTGGAGTGACCCCTTTGAGCAG

CircID chr17:57862354|57862503
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MAADKSQFWSHTTVGAHRGSDSPAGLEALLSEGGQRWVLE
Nucleotide Sequence TTGGCAGCAGACAAAAGCCAGTTCTGGAGTCACACCACAGTAGGGGCTCACAGGGGCTCTGACTCCCCAGCTGGACTGGAAGCCCTGCTGTCCGAGGGTGGGCAGCGGTGGGTCCTGGAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites