CircRNA Information

General Information
circRNA Basic Information
CircID chr17:58089656|58089772
Strand +
CircType exon
Host Gene ENSG00000264364.2;
Algorism CIRI2;
Sequence CTTCCTTCCTACCCCTTTTTCCTTGACAATCCCAACACTGTCCCCCTGCAGCCTCCCTGGCCCTCCCAAAGCAGCATCCACCGCCAGGAAGAGGCAGCTGCACAGTTTTAGTTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:58089656|58089772 hsa-miR-22-5p 0 0 1
chr17:58089656|58089772 hsa-miR-22-3p 0 0 1
chr17:58089656|58089772 hsa-miR-1301-5p 0 0 1
chr17:58089656|58089772 hsa-miR-1301-3p 0 0 1
chr17:58089656|58089772 hsa-miR-1236-5p 0 0 1
chr17:58089656|58089772 hsa-miR-1236-3p 0 0 1
chr17:58089656|58089772 hsa-miR-1205 0 0 1
chr17:58089656|58089772 hsa-miR-548e-5p 0 0 1
chr17:58089656|58089772 hsa-miR-548e-3p 0 0 1
chr17:58089656|58089772 hsa-miR-548g-5p 0 0 1
chr17:58089656|58089772 hsa-miR-548g-3p 0 0 1
chr17:58089656|58089772 hsa-miR-1252-5p 0 0 1
chr17:58089656|58089772 hsa-miR-1252-3p 0 0 1
chr17:58089656|58089772 hsa-miR-1321 0 0 1
chr17:58089656|58089772 hsa-miR-485-5p 0 0 1
chr17:58089656|58089772 hsa-miR-769-3p 0 0 1
chr17:58089656|58089772 hsa-miR-450b-3p 0 0 1
chr17:58089656|58089772 hsa-miR-548a-3p 0 0 1
chr17:58089656|58089772 hsa-miR-548f 0 0 1
chr17:58089656|58089772 hsa-miR-219-5p 0 0 1
chr17:58089656|58089772 hsa-miR-610 0 1 0
chr17:58089656|58089772 hsa-miR-646 0 1 0
chr17:58089656|58089772 hsa-miR-658 1 0 0
chr17:58089656|58089772 hsa-miR-3138 1 0 0
chr17:58089656|58089772 hsa-miR-3147 1 0 0
chr17:58089656|58089772 hsa-miR-3165 0 1 0
chr17:58089656|58089772 hsa-miR-3196 1 0 0
chr17:58089656|58089772 hsa-miR-4298 1 0 0
chr17:58089656|58089772 hsa-miR-4270 0 1 0
chr17:58089656|58089772 hsa-miR-4425 1 1 0
chr17:58089656|58089772 hsa-miR-4688 1 0 0
chr17:58089656|58089772 hsa-miR-4739 1 1 0
chr17:58089656|58089772 hsa-miR-4741 1 0 0
chr17:58089656|58089772 hsa-miR-5047 0 1 0
chr17:58089656|58089772 hsa-miR-5090 1 0 0
chr17:58089656|58089772 hsa-miR-5572 1 0 0
chr17:58089656|58089772 hsa-miR-5698 1 0 0
chr17:58089656|58089772 hsa-miR-6124 1 0 0
chr17:58089656|58089772 hsa-miR-6132 1 0 0
chr17:58089656|58089772 hsa-miR-7150 1 0 0
chr17:58089656|58089772 hsa-miR-8052 1 0 0
chr17:58089656|58089772 hsa-miR-12128 1 0 0
chr17:58089656|58089772 hsa-miR-211-3p 1 0 0
chr17:58089656|58089772 hsa-miR-7106-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6894-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6857-5p 1 0 0
chr17:58089656|58089772 hsa-miR-4687-3p 1 0 0
chr17:58089656|58089772 hsa-miR-6799-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6728-5p 1 0 0
chr17:58089656|58089772 hsa-miR-3192-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6880-5p 1 0 0
chr17:58089656|58089772 hsa-miR-7847-3p 1 0 0
chr17:58089656|58089772 hsa-miR-4722-5p 1 0 0
chr17:58089656|58089772 hsa-miR-7154-3p 1 0 0
chr17:58089656|58089772 hsa-miR-6741-5p 1 0 0
chr17:58089656|58089772 hsa-miR-7845-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6805-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6798-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6810-5p 1 0 0
chr17:58089656|58089772 hsa-miR-5006-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6882-3p 0 1 0
chr17:58089656|58089772 hsa-miR-6786-5p 1 0 0
chr17:58089656|58089772 hsa-miR-4640-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6771-5p 1 0 0
chr17:58089656|58089772 hsa-miR-149-3p 1 1 0
chr17:58089656|58089772 hsa-miR-6830-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6895-5p 0 1 0
chr17:58089656|58089772 hsa-miR-4746-3p 1 0 0
chr17:58089656|58089772 hsa-miR-7113-5p 0 1 0
chr17:58089656|58089772 hsa-miR-10400-5p 1 0 0
chr17:58089656|58089772 hsa-miR-1207-5p 1 0 0
chr17:58089656|58089772 hsa-miR-1233-5p 1 0 0
chr17:58089656|58089772 hsa-miR-1273h-5p 1 1 0
chr17:58089656|58089772 hsa-miR-4763-3p 1 0 0
chr17:58089656|58089772 hsa-miR-6769b-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6778-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6787-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6870-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6743-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6752-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6754-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6803-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6819-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6851-5p 1 0 0
chr17:58089656|58089772 hsa-miR-7110-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6722-3p 1 0 0
chr17:58089656|58089772 hsa-miR-6779-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6780a-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6797-5p 1 0 0
chr17:58089656|58089772 hsa-miR-4728-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6780b-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6836-5p 1 0 0
chr17:58089656|58089772 hsa-miR-328-5p 1 1 0
chr17:58089656|58089772 hsa-miR-4685-5p 1 0 0
chr17:58089656|58089772 hsa-miR-4726-5p 1 1 0
chr17:58089656|58089772 hsa-miR-4749-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6729-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6738-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6794-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6795-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6846-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6848-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6883-5p 1 1 0
chr17:58089656|58089772 hsa-miR-6887-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6731-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6855-5p 1 0 0
chr17:58089656|58089772 hsa-miR-6785-5p 1 1 0
chr17:58089656|58089772 hsa-miR-2682-3p 0 1 0
chr17:58089656|58089772 hsa-miR-6884-5p 0 1 0
chr17:58089656|58089772 hsa-miR-708-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:58089656|58089772
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MTIPTLSPCSLPGPPKAASTARKRQLHSFSS
Nucleotide Sequence TTGACAATCCCAACACTGTCCCCCTGCAGCCTCCCTGGCCCTCCCAAAGCAGCATCCACCGCCAGGAAGAGGCAGCTGCACAGTTTTAGTTCC
CircID chr17:58089656|58089772
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MCSCLFLAVDAALGGPGRLQGDSVGIVKEKGVGRK
Nucleotide Sequence CTGTGCAGCTGCCTCTTCCTGGCGGTGGATGCTGCTTTGGGAGGGCCAGGGAGGCTGCAGGGGGACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAGGAAGGAAG
CircID chr17:58089656|58089772
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MPLPGGGCCFGRAREAAGGQCWDCQGKRGRKE
Nucleotide Sequence CTGCCTCTTCCTGGCGGTGGATGCTGCTTTGGGAGGGCCAGGGAGGCTGCAGGGGGACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAGGAAGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab