CircRNA Information

General Information
circRNA Basic Information
CircID chr17:58206318|58206547
Strand -
CircType exon
Host Gene ENSG00000011143.15;
Algorism CIRI2;
Sequence CCTTCCAGACGGTCCAACACACTCCGCATCCTTTTCTGAAGGGAGCTCGATTCCATGAAGGCCCTGCAGGGAGGCCAGCCACATGGTTACGGCTGTCTCCACCCCTCAGGGCTAAGGTGCCCTGAGGCAGAGGGCCAAGTCACTCACCTGGACTGCTGCAGACAGTGCAAGCGGAAGGTGACAGTGCCTGTGGTCTCTGTGCGGAGTCCAAAGCGGCTCAGGCGTTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:58206318|58206547 hsa-miR-107 0 0 1
chr17:58206318|58206547 hsa-miR-205-5p 0 0 1
chr17:58206318|58206547 hsa-miR-205-3p 0 0 1
chr17:58206318|58206547 hsa-miR-122-5p 0 0 1
chr17:58206318|58206547 hsa-miR-122-3p 0 0 1
chr17:58206318|58206547 hsa-miR-328-5p 0 0 1
chr17:58206318|58206547 hsa-miR-328-3p 0 0 1
chr17:58206318|58206547 hsa-miR-346 0 0 1
chr17:58206318|58206547 hsa-miR-572 0 0 1
chr17:58206318|58206547 hsa-miR-608 0 0 1
chr17:58206318|58206547 hsa-miR-614 0 0 1
chr17:58206318|58206547 hsa-miR-632 0 0 1
chr17:58206318|58206547 hsa-miR-658 1 0 1
chr17:58206318|58206547 hsa-miR-1205 0 1 1
chr17:58206318|58206547 hsa-miR-1291 0 0 1
chr17:58206318|58206547 hsa-miR-1299 0 0 1
chr17:58206318|58206547 hsa-miR-1266-5p 0 0 1
chr17:58206318|58206547 hsa-miR-1266-3p 0 0 1
chr17:58206318|58206547 hsa-miR-1292-5p 0 0 1
chr17:58206318|58206547 hsa-miR-1292-3p 0 0 1
chr17:58206318|58206547 hsa-miR-125a-3p 0 1 1
chr17:58206318|58206547 hsa-miR-1184 0 1 1
chr17:58206318|58206547 hsa-miR-574-5p 0 0 1
chr17:58206318|58206547 hsa-miR-423-5p 0 0 1
chr17:58206318|58206547 hsa-miR-490-5p 0 0 1
chr17:58206318|58206547 hsa-miR-875-3p 0 0 1
chr17:58206318|58206547 hsa-miR-140-3p 0 0 1
chr17:58206318|58206547 hsa-miR-125a-5p 0 0 1
chr17:58206318|58206547 hsa-miR-455-3p 0 0 1
chr17:58206318|58206547 hsa-miR-125b 0 0 1
chr17:58206318|58206547 hsa-miR-103 0 0 1
chr17:58206318|58206547 hsa-miR-1269 0 0 1
chr17:58206318|58206547 hsa-miR-129-3p 0 0 1
chr17:58206318|58206547 hsa-miR-661 1 1 0
chr17:58206318|58206547 hsa-miR-1265 1 0 0
chr17:58206318|58206547 hsa-miR-3147 0 1 0
chr17:58206318|58206547 hsa-miR-4512 0 1 0
chr17:58206318|58206547 hsa-miR-4518 0 1 0
chr17:58206318|58206547 hsa-miR-4651 0 1 0
chr17:58206318|58206547 hsa-miR-4658 1 0 0
chr17:58206318|58206547 hsa-miR-5091 0 1 0
chr17:58206318|58206547 hsa-miR-6078 1 1 0
chr17:58206318|58206547 hsa-miR-6132 1 0 0
chr17:58206318|58206547 hsa-miR-6745 0 1 0
chr17:58206318|58206547 hsa-miR-1301-3p 1 1 0
chr17:58206318|58206547 hsa-miR-4474-3p 0 1 0
chr17:58206318|58206547 hsa-miR-6842-3p 0 1 0
chr17:58206318|58206547 hsa-miR-6782-5p 0 1 0
chr17:58206318|58206547 hsa-miR-7109-5p 0 1 0
chr17:58206318|58206547 hsa-miR-5001-3p 0 1 0
chr17:58206318|58206547 hsa-miR-3127-5p 0 1 0
chr17:58206318|58206547 hsa-miR-7113-3p 0 1 0
chr17:58206318|58206547 hsa-miR-6778-3p 0 1 0
chr17:58206318|58206547 hsa-miR-2276-5p 0 1 0
chr17:58206318|58206547 hsa-miR-1468-5p 0 1 0
chr17:58206318|58206547 hsa-miR-6773-3p 0 1 0
chr17:58206318|58206547 hsa-miR-6760-3p 0 1 0
chr17:58206318|58206547 hsa-miR-6775-5p 1 0 0
chr17:58206318|58206547 hsa-miR-6836-5p 1 1 0
chr17:58206318|58206547 hsa-miR-6738-5p 0 1 0
chr17:58206318|58206547 hsa-miR-675-5p 1 0 0
chr17:58206318|58206547 hsa-miR-1199-5p 1 0 0
chr17:58206318|58206547 hsa-miR-3184-5p 1 0 0
chr17:58206318|58206547 hsa-miR-10398-5p 1 0 0
chr17:58206318|58206547 hsa-miR-6529-5p 0 1 0
chr17:58206318|58206547 hsa-miR-6837-5p 0 1 0
chr17:58206318|58206547 hsa-miR-6751-3p 0 1 0
chr17:58206318|58206547 hsa-miR-10394-5p 0 1 0
chr17:58206318|58206547 hsa-miR-6820-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:58206318|58206547
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MKALQGGQPHGYGCLHPSGLRCPEAEGQVTHLDCCRQCKRKVTVPVVSVRSPKRLRRS
Nucleotide Sequence ATGAAGGCCCTGCAGGGAGGCCAGCCACATGGTTACGGCTGTCTCCACCCCTCAGGGCTAAGGTGCCCTGAGGCAGAGGGCCAAGTCACTCACCTGGACTGCTGCAGACAGTGCAAGCGGAAGGTGACAGTGCCTGTGGTCTCTGTGCGGAGTCCAAAGCGGCTCAGGCGTTCC

CircID chr17:58206318|58206547
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MKGARFHEGPAGRPATWLRLSPPLRAKVP
Nucleotide Sequence CTGAAGGGAGCTCGATTCCATGAAGGCCCTGCAGGGAGGCCAGCCACATGGTTACGGCTGTCTCCACCCCTCAGGGCTAAGGTGCCCTGA

CircID chr17:58206318|58206547
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MLQTVQAEGDSACGLCAESKAAQAFP
Nucleotide Sequence CTGCTGCAGACAGTGCAAGCGGAAGGTGACAGTGCCTGTGGTCTCTGTGCGGAGTCCAAAGCGGCTCAGGCGTTCCCC

CircID chr17:58206318|58206547
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MSRFGLRTETTGTVTFRLHCLQQSR
Nucleotide Sequence CTGAGCCGCTTTGGACTCCGCACAGAGACCACAGGCACTGTCACCTTCCGCTTGCACTGTCTGCAGCAGTCCAGGTGA

CircID chr17:58206318|58206547
ORF Type ORF5
Protein Length 43
Nucleotide Length 129
Protein Sequence MPQGTLALRGGDSRNHVAGLPAGPSWNRAPFRKGCGVCWTVWK
Nucleotide Sequence CTGCCTCAGGGCACCTTAGCCCTGAGGGGTGGAGACAGCCGTAACCATGTGGCTGGCCTCCCTGCAGGGCCTTCATGGAATCGAGCTCCCTTCAGAAAAGGATGCGGAGTGTGTTGGACCGTCTGGAAG

CircID chr17:58206318|58206547
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MWLASLQGLHGIELPSEKDAECVGPSGR
Nucleotide Sequence ATGTGGCTGGCCTCCCTGCAGGGCCTTCATGGAATCGAGCTCCCTTCAGAAAAGGATGCGGAGTGTGTTGGACCGTCTGGAAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites