CircRNA Information

General Information
circRNA Basic Information
CircID chr17:58278247|58278482
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCAGAGAGGCCTCCGGAGGCCCGAAAGGGATCGCTGCCTAGGGCGCCATCAGCAACAGCCTCTGAGGTGCAGGGTTAATGAGCAGAACACTGAACTGGGAACCTGGGCAACCCCTGGGTCTGGGCACCGCCAGGCCTCGGATCCCTCCTCACTAAAGCGTCGCCCGTCTCTCTCCCCTTCTCTCTGCTGTGCCTGCTCTCCCTCTGGCCCTGACATTCTCCTGTCTGTCTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:58278247|58278482 hsa-miR-204-5p 0 0 1
chr17:58278247|58278482 hsa-miR-204-3p 0 0 1
chr17:58278247|58278482 hsa-miR-211-5p 0 0 1
chr17:58278247|58278482 hsa-miR-211-3p 0 0 1
chr17:58278247|58278482 hsa-miR-185-5p 0 0 1
chr17:58278247|58278482 hsa-miR-185-3p 0 0 1
chr17:58278247|58278482 hsa-miR-652-5p 0 0 1
chr17:58278247|58278482 hsa-miR-652-3p 0 0 1
chr17:58278247|58278482 hsa-miR-921 1 1 1
chr17:58278247|58278482 hsa-miR-922 1 1 1
chr17:58278247|58278482 hsa-miR-940 0 0 1
chr17:58278247|58278482 hsa-miR-1203 0 0 1
chr17:58278247|58278482 hsa-miR-1205 0 0 1
chr17:58278247|58278482 hsa-miR-1324 0 0 1
chr17:58278247|58278482 hsa-miR-885-3p 0 0 1
chr17:58278247|58278482 hsa-miR-485-5p 0 1 1
chr17:58278247|58278482 hsa-miR-1184 0 0 1
chr17:58278247|58278482 hsa-miR-566 0 0 1
chr17:58278247|58278482 hsa-miR-483-5p 1 1 1
chr17:58278247|58278482 hsa-miR-188-5p 0 0 1
chr17:58278247|58278482 hsa-miR-767-3p 0 1 1
chr17:58278247|58278482 hsa-miR-628-5p 0 0 1
chr17:58278247|58278482 hsa-miR-198 1 0 0
chr17:58278247|58278482 hsa-miR-564 1 0 0
chr17:58278247|58278482 hsa-miR-602 1 0 0
chr17:58278247|58278482 hsa-miR-638 1 0 0
chr17:58278247|58278482 hsa-miR-663a 1 0 0
chr17:58278247|58278482 hsa-miR-658 1 0 0
chr17:58278247|58278482 hsa-miR-765 1 0 0
chr17:58278247|58278482 hsa-miR-936 1 0 0
chr17:58278247|58278482 hsa-miR-1275 1 0 0
chr17:58278247|58278482 hsa-miR-2861 1 1 0
chr17:58278247|58278482 hsa-miR-3132 1 0 0
chr17:58278247|58278482 hsa-miR-3141 1 0 0
chr17:58278247|58278482 hsa-miR-3153 1 0 0
chr17:58278247|58278482 hsa-miR-3154 1 1 0
chr17:58278247|58278482 hsa-miR-3175 1 1 0
chr17:58278247|58278482 hsa-miR-3181 0 1 0
chr17:58278247|58278482 hsa-miR-3196 1 0 0
chr17:58278247|58278482 hsa-miR-3197 1 0 0
chr17:58278247|58278482 hsa-miR-4298 1 0 0
chr17:58278247|58278482 hsa-miR-4306 0 1 0
chr17:58278247|58278482 hsa-miR-4269 1 1 0
chr17:58278247|58278482 hsa-miR-4270 1 0 0
chr17:58278247|58278482 hsa-miR-3918 1 1 0
chr17:58278247|58278482 hsa-miR-3936 1 0 0
chr17:58278247|58278482 hsa-miR-4428 1 0 0
chr17:58278247|58278482 hsa-miR-4454 0 1 0
chr17:58278247|58278482 hsa-miR-4467 1 0 0
chr17:58278247|58278482 hsa-miR-4486 1 0 0
chr17:58278247|58278482 hsa-miR-4487 1 0 0
chr17:58278247|58278482 hsa-miR-4498 1 0 0
chr17:58278247|58278482 hsa-miR-2392 1 0 0
chr17:58278247|58278482 hsa-miR-4510 1 1 0
chr17:58278247|58278482 hsa-miR-4514 1 0 0
chr17:58278247|58278482 hsa-miR-4516 1 0 0
chr17:58278247|58278482 hsa-miR-4644 1 1 0
chr17:58278247|58278482 hsa-miR-4651 1 0 0
chr17:58278247|58278482 hsa-miR-4673 1 0 0
chr17:58278247|58278482 hsa-miR-4688 1 0 0
chr17:58278247|58278482 hsa-miR-4706 1 0 0
chr17:58278247|58278482 hsa-miR-4730 1 0 0
chr17:58278247|58278482 hsa-miR-4739 1 1 0
chr17:58278247|58278482 hsa-miR-4767 1 0 0
chr17:58278247|58278482 hsa-miR-5192 1 0 0
chr17:58278247|58278482 hsa-miR-5698 1 0 0
chr17:58278247|58278482 hsa-miR-5739 1 1 0
chr17:58278247|58278482 hsa-miR-6077 1 0 0
chr17:58278247|58278482 hsa-miR-6081 1 0 0
chr17:58278247|58278482 hsa-miR-6090 1 0 0
chr17:58278247|58278482 hsa-miR-6124 1 0 0
chr17:58278247|58278482 hsa-miR-6127 1 0 0
chr17:58278247|58278482 hsa-miR-6129 1 1 0
chr17:58278247|58278482 hsa-miR-6133 1 0 0
chr17:58278247|58278482 hsa-miR-6165 1 0 0
chr17:58278247|58278482 hsa-miR-7515 1 0 0
chr17:58278247|58278482 hsa-miR-8072 1 0 0
chr17:58278247|58278482 hsa-miR-8075 1 1 0
chr17:58278247|58278482 hsa-miR-8085 1 1 0
chr17:58278247|58278482 hsa-miR-9718 1 0 0
chr17:58278247|58278482 hsa-miR-9899 1 0 0
chr17:58278247|58278482 hsa-miR-12119 1 0 0
chr17:58278247|58278482 hsa-miR-12128 1 0 0
chr17:58278247|58278482 hsa-miR-143-5p 1 0 0
chr17:58278247|58278482 hsa-miR-150-3p 1 0 0
chr17:58278247|58278482 hsa-miR-4435 1 0 0
chr17:58278247|58278482 hsa-miR-4433b-3p 1 0 0
chr17:58278247|58278482 hsa-miR-6734-5p 1 0 0
chr17:58278247|58278482 hsa-miR-504-3p 1 0 0
chr17:58278247|58278482 hsa-miR-4726-3p 1 1 0
chr17:58278247|58278482 hsa-miR-4433a-3p 1 0 0
chr17:58278247|58278482 hsa-miR-6765-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3150a-3p 1 0 0
chr17:58278247|58278482 hsa-miR-7106-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6825-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6894-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4687-3p 0 1 0
chr17:58278247|58278482 hsa-miR-25-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6510-5p 1 1 0
chr17:58278247|58278482 hsa-miR-139-3p 1 0 0
chr17:58278247|58278482 hsa-miR-1236-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3622a-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6089 1 0 0
chr17:58278247|58278482 hsa-miR-6757-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6873-5p 1 1 0
chr17:58278247|58278482 hsa-miR-4695-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6746-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4722-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6727-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6806-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6721-5p 1 0 0
chr17:58278247|58278482 hsa-miR-197-5p 1 0 0
chr17:58278247|58278482 hsa-miR-7845-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6742-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6716-5p 1 0 0
chr17:58278247|58278482 hsa-miR-1292-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3180-3p 1 0 0
chr17:58278247|58278482 hsa-miR-6732-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6798-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6770-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3126-5p 1 1 0
chr17:58278247|58278482 hsa-miR-486-3p 1 0 0
chr17:58278247|58278482 hsa-miR-6760-5p 1 1 0
chr17:58278247|58278482 hsa-miR-3130-3p 0 1 0
chr17:58278247|58278482 hsa-miR-2467-3p 1 1 0
chr17:58278247|58278482 hsa-miR-7855-5p 1 0 0
chr17:58278247|58278482 hsa-miR-5006-5p 1 0 0
chr17:58278247|58278482 hsa-miR-615-5p 1 0 0
chr17:58278247|58278482 hsa-miR-7109-5p 1 0 0
chr17:58278247|58278482 hsa-miR-1226-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4640-5p 1 1 0
chr17:58278247|58278482 hsa-miR-3127-5p 0 1 0
chr17:58278247|58278482 hsa-miR-1908-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6771-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4690-5p 1 1 0
chr17:58278247|58278482 hsa-miR-92b-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4732-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3202 1 0 0
chr17:58278247|58278482 hsa-miR-6834-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4743-5p 1 1 0
chr17:58278247|58278482 hsa-miR-4446-3p 1 0 0
chr17:58278247|58278482 hsa-miR-149-3p 1 1 0
chr17:58278247|58278482 hsa-miR-6717-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6824-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6781-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6877-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6895-5p 1 1 0
chr17:58278247|58278482 hsa-miR-7160-3p 1 0 0
chr17:58278247|58278482 hsa-miR-3922-5p 1 0 0
chr17:58278247|58278482 hsa-miR-423-5p 1 0 0
chr17:58278247|58278482 hsa-miR-7846-3p 1 0 0
chr17:58278247|58278482 hsa-miR-3120-3p 1 0 0
chr17:58278247|58278482 hsa-miR-5000-5p 0 1 0
chr17:58278247|58278482 hsa-miR-6832-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6801-5p 1 1 0
chr17:58278247|58278482 hsa-miR-214-3p 1 1 0
chr17:58278247|58278482 hsa-miR-6853-3p 1 1 0
chr17:58278247|58278482 hsa-miR-6767-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3177-3p 1 0 0
chr17:58278247|58278482 hsa-miR-4772-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6732-3p 0 1 0
chr17:58278247|58278482 hsa-miR-10400-5p 1 0 0
chr17:58278247|58278482 hsa-miR-1207-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4763-3p 1 0 0
chr17:58278247|58278482 hsa-miR-6787-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6870-5p 1 0 0
chr17:58278247|58278482 hsa-miR-1343-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6726-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6743-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6754-5p 1 0 0
chr17:58278247|58278482 hsa-miR-1249-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6779-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6780a-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6797-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6875-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6879-5p 1 0 0
chr17:58278247|58278482 hsa-miR-7111-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6866-3p 0 1 0
chr17:58278247|58278482 hsa-miR-4728-5p 1 1 0
chr17:58278247|58278482 hsa-miR-5196-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6780b-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6836-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6862-5p 1 0 0
chr17:58278247|58278482 hsa-miR-10396b-5p 1 0 0
chr17:58278247|58278482 hsa-miR-10526-3p 1 0 0
chr17:58278247|58278482 hsa-miR-1909-3p 1 0 0
chr17:58278247|58278482 hsa-miR-4632-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4649-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4726-5p 1 1 0
chr17:58278247|58278482 hsa-miR-4745-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4749-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6729-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6735-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6738-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6794-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6795-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6858-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6883-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6887-5p 1 1 0
chr17:58278247|58278482 hsa-miR-4436b-3p 1 0 0
chr17:58278247|58278482 hsa-miR-4697-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4723-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6831-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6845-5p 1 0 0
chr17:58278247|58278482 hsa-miR-939-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4758-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6511a-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6511b-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6731-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6758-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6856-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6799-3p 1 0 0
chr17:58278247|58278482 hsa-miR-7843-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4665-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6736-5p 1 0 0
chr17:58278247|58278482 hsa-miR-3679-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6891-5p 1 0 0
chr17:58278247|58278482 hsa-miR-4716-3p 1 0 0
chr17:58278247|58278482 hsa-miR-6785-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6762-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6837-5p 1 1 0
chr17:58278247|58278482 hsa-miR-6744-3p 0 1 0
chr17:58278247|58278482 hsa-miR-3619-5p 1 0 0
chr17:58278247|58278482 hsa-miR-6764-5p 0 1 0
chr17:58278247|58278482 hsa-miR-6715b-5p 1 0 0
chr17:58278247|58278482 hsa-miR-5195-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:58278247|58278482
ORF Type ORF1
Protein Length 78
Nucleotide Length 234
Protein Sequence LQRGLRRPERDRCLGRHQQQPLRCRVNEQNTELGTWATPGSGHRQASDPSSLKRRPSLSPSLCCACSPSGPDILLSVS
Nucleotide Sequence CTGCAGAGAGGCCTCCGGAGGCCCGAAAGGGATCGCTGCCTAGGGCGCCATCAGCAACAGCCTCTGAGGTGCAGGGTTAATGAGCAGAACACTGAACTGGGAACCTGGGCAACCCCTGGGTCTGGGCACCGCCAGGCCTCGGATCCCTCCTCACTAAAGCGTCGCCCGTCTCTCTCCCCTTCTCTCTGCTGTGCCTGCTCTCCCTCTGGCCCTGACATTCTCCTGTCTGTCTCT
CircID chr17:58278247|58278482
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MSRTLNWEPGQPLGLGTARPRIPPH
Nucleotide Sequence ATGAGCAGAACACTGAACTGGGAACCTGGGCAACCCCTGGGTCTGGGCACCGCCAGGCCTCGGATCCCTCCTCACTAA
CircID chr17:58278247|58278482
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MGNPWVWAPPGLGSLLTKASPVSLPFSLLCLLSLWP
Nucleotide Sequence CTGGGCAACCCCTGGGTCTGGGCACCGCCAGGCCTCGGATCCCTCCTCACTAAAGCGTCGCCCGTCTCTCTCCCCTTCTCTCTGCTGTGCCTGCTCTCCCTCTGGCCCTGA
CircID chr17:58278247|58278482
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MSGPEGEQAQQREGERDGRRFSEEGSEAWRCPDPGVAQVPSSVFCSLTLHLRGCC
Nucleotide Sequence ATGTCAGGGCCAGAGGGAGAGCAGGCACAGCAGAGAGAAGGGGAGAGAGACGGGCGACGCTTTAGTGAGGAGGGATCCGAGGCCTGGCGGTGCCCAGACCCAGGGGTTGCCCAGGTTCCCAGTTCAGTGTTCTGCTCATTAACCCTGCACCTCAGAGGCTGTTGCTGA
CircID chr17:58278247|58278482
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MAVPRPRGCPGSQFSVLLINPAPQRLLLMAP
Nucleotide Sequence CTGGCGGTGCCCAGACCCAGGGGTTGCCCAGGTTCCCAGTTCAGTGTTCTGCTCATTAACCCTGCACCTCAGAGGCTGTTGCTGATGGCGCCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab