CircRNA Information

General Information
circRNA Basic Information
CircID chr17:58280617|58280838
Strand -
CircType exon
Host Gene ENSG00000005381.7;
Algorism CIRI2;
Sequence CTTCAGAGGGCTGGGGCGTGGCCAGAATGGCCAGGAGCCCTGCTAGGGCCAGAAGCAGCTTCATCTCTGCAGTGAGACCCCCAGCCCAGCAAGGTCCTAAGTCCACCATGCATCTGAGAGAAGAGAAGAAGGGAACCCCCATCTCTCTTCTCCTGGGCTGCTCAATCCCCCTTTGTACCTCAGCCCCACCTCAGAGGGCCCTGTCTATGGATAAAGCCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:58280617|58280838 hsa-let-7b-5p 0 0 1
chr17:58280617|58280838 hsa-let-7b-3p 0 0 1
chr17:58280617|58280838 hsa-let-7c-5p 0 0 1
chr17:58280617|58280838 hsa-let-7c-3p 0 0 1
chr17:58280617|58280838 hsa-let-7d-5p 0 0 1
chr17:58280617|58280838 hsa-let-7d-3p 0 0 1
chr17:58280617|58280838 hsa-let-7e-5p 0 0 1
chr17:58280617|58280838 hsa-let-7e-3p 0 0 1
chr17:58280617|58280838 hsa-miR-98-5p 0 0 1
chr17:58280617|58280838 hsa-miR-98-3p 0 0 1
chr17:58280617|58280838 hsa-miR-204-5p 0 0 1
chr17:58280617|58280838 hsa-miR-204-3p 0 0 1
chr17:58280617|58280838 hsa-miR-211-5p 0 0 1
chr17:58280617|58280838 hsa-miR-211-3p 0 0 1
chr17:58280617|58280838 hsa-let-7g-5p 0 0 1
chr17:58280617|58280838 hsa-let-7g-3p 0 0 1
chr17:58280617|58280838 hsa-let-7i-5p 0 0 1
chr17:58280617|58280838 hsa-let-7i-3p 0 0 1
chr17:58280617|58280838 hsa-miR-143-5p 0 0 1
chr17:58280617|58280838 hsa-miR-143-3p 0 0 1
chr17:58280617|58280838 hsa-miR-149-5p 0 0 1
chr17:58280617|58280838 hsa-miR-149-3p 0 0 1
chr17:58280617|58280838 hsa-miR-328-5p 0 0 1
chr17:58280617|58280838 hsa-miR-328-3p 0 0 1
chr17:58280617|58280838 hsa-miR-202-5p 0 0 1
chr17:58280617|58280838 hsa-miR-202-3p 0 0 1
chr17:58280617|58280838 hsa-miR-588 0 0 1
chr17:58280617|58280838 hsa-miR-623 0 0 1
chr17:58280617|58280838 hsa-miR-637 0 0 1
chr17:58280617|58280838 hsa-miR-665 0 0 1
chr17:58280617|58280838 hsa-miR-942-5p 0 0 1
chr17:58280617|58280838 hsa-miR-942-3p 0 0 1
chr17:58280617|58280838 hsa-miR-1236-5p 0 0 1
chr17:58280617|58280838 hsa-miR-1236-3p 0 0 1
chr17:58280617|58280838 hsa-miR-1291 0 0 1
chr17:58280617|58280838 hsa-miR-1248 0 0 1
chr17:58280617|58280838 hsa-miR-1253 0 0 1
chr17:58280617|58280838 hsa-miR-127-5p 0 1 1
chr17:58280617|58280838 hsa-miR-524-5p 0 0 1
chr17:58280617|58280838 hsa-miR-509-3-5p 0 1 1
chr17:58280617|58280838 hsa-miR-509-5p 0 0 1
chr17:58280617|58280838 hsa-miR-520d-5p 0 0 1
chr17:58280617|58280838 hsa-let-7a 0 0 1
chr17:58280617|58280838 hsa-let-7f 0 0 1
chr17:58280617|58280838 hsa-miR-608 1 0 0
chr17:58280617|58280838 hsa-miR-639 1 0 0
chr17:58280617|58280838 hsa-miR-762 1 1 0
chr17:58280617|58280838 hsa-miR-1183 1 0 0
chr17:58280617|58280838 hsa-miR-4257 1 0 0
chr17:58280617|58280838 hsa-miR-378g 0 1 0
chr17:58280617|58280838 hsa-miR-4437 1 0 0
chr17:58280617|58280838 hsa-miR-4525 0 1 0
chr17:58280617|58280838 hsa-miR-1587 0 1 0
chr17:58280617|58280838 hsa-miR-4651 1 0 0
chr17:58280617|58280838 hsa-miR-4656 1 1 0
chr17:58280617|58280838 hsa-miR-4741 1 0 0
chr17:58280617|58280838 hsa-miR-5685 0 1 0
chr17:58280617|58280838 hsa-miR-5787 1 1 0
chr17:58280617|58280838 hsa-miR-6085 1 0 0
chr17:58280617|58280838 hsa-miR-6088 1 1 0
chr17:58280617|58280838 hsa-miR-8058 0 1 0
chr17:58280617|58280838 hsa-miR-92a-2-5p 0 1 0
chr17:58280617|58280838 hsa-miR-4731-5p 0 1 0
chr17:58280617|58280838 hsa-miR-6765-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6857-5p 0 1 0
chr17:58280617|58280838 hsa-miR-8071 1 0 0
chr17:58280617|58280838 hsa-miR-4768-3p 0 1 0
chr17:58280617|58280838 hsa-miR-6880-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6746-5p 0 1 0
chr17:58280617|58280838 hsa-miR-7160-5p 0 1 0
chr17:58280617|58280838 hsa-miR-6762-3p 1 0 0
chr17:58280617|58280838 hsa-miR-3187-3p 0 1 0
chr17:58280617|58280838 hsa-miR-23b-5p 0 1 0
chr17:58280617|58280838 hsa-miR-197-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6832-3p 0 1 0
chr17:58280617|58280838 hsa-miR-23a-5p 0 1 0
chr17:58280617|58280838 hsa-miR-6798-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6782-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6821-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6740-3p 0 1 0
chr17:58280617|58280838 hsa-miR-6786-5p 1 0 0
chr17:58280617|58280838 hsa-miR-4756-3p 0 1 0
chr17:58280617|58280838 hsa-miR-6809-3p 0 1 0
chr17:58280617|58280838 hsa-miR-4787-5p 1 0 0
chr17:58280617|58280838 hsa-miR-1304-3p 0 1 0
chr17:58280617|58280838 hsa-miR-3158-5p 1 1 0
chr17:58280617|58280838 hsa-miR-5010-5p 0 1 0
chr17:58280617|58280838 hsa-miR-7162-3p 0 1 0
chr17:58280617|58280838 hsa-miR-3190-5p 0 1 0
chr17:58280617|58280838 hsa-miR-4638-5p 1 0 0
chr17:58280617|58280838 hsa-miR-4778-3p 0 1 0
chr17:58280617|58280838 hsa-miR-208a-5p 1 0 0
chr17:58280617|58280838 hsa-miR-5088-3p 0 1 0
chr17:58280617|58280838 hsa-miR-4524b-3p 0 1 0
chr17:58280617|58280838 hsa-miR-6769b-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6812-5p 1 0 0
chr17:58280617|58280838 hsa-miR-5001-5p 0 1 0
chr17:58280617|58280838 hsa-miR-6737-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6756-5p 1 1 0
chr17:58280617|58280838 hsa-miR-6769a-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6803-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6813-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6819-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6751-5p 1 1 0
chr17:58280617|58280838 hsa-miR-6866-3p 0 1 0
chr17:58280617|58280838 hsa-miR-3620-5p 0 1 0
chr17:58280617|58280838 hsa-miR-6836-5p 1 1 0
chr17:58280617|58280838 hsa-miR-10526-3p 0 1 0
chr17:58280617|58280838 hsa-miR-4685-5p 0 1 0
chr17:58280617|58280838 hsa-miR-4745-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6794-5p 0 1 0
chr17:58280617|58280838 hsa-miR-6846-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6858-5p 1 0 0
chr17:58280617|58280838 hsa-miR-6855-5p 1 1 0
chr17:58280617|58280838 hsa-miR-3085-3p 1 0 0
chr17:58280617|58280838 hsa-miR-4701-5p 0 1 0
chr17:58280617|58280838 hsa-miR-4768-5p 0 1 0
chr17:58280617|58280838 hsa-miR-4690-3p 0 1 0
chr17:58280617|58280838 hsa-miR-6807-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:58280617|58280838
ORF Type ORF1
Protein Length 65
Nucleotide Length 195
Protein Sequence MARSPARARSSFISAVRPPAQQGPKSTMHLREEKKGTPISLLLGCSIPLCTSAPPQRALSMDKAR
Nucleotide Sequence ATGGCCAGGAGCCCTGCTAGGGCCAGAAGCAGCTTCATCTCTGCAGTGAGACCCCCAGCCCAGCAAGGTCCTAAGTCCACCATGCATCTGAGAGAAGAGAAGAAGGGAACCCCCATCTCTCTTCTCCTGGGCTGCTCAATCCCCCTTTGTACCTCAGCCCCACCTCAGAGGGCCCTGTCTATGGATAAAGCCAGA

CircID chr17:58280617|58280838
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MRYKGGLSSPGEERWGFPSSLLSDAWWT
Nucleotide Sequence CTGAGGTACAAAGGGGGATTGAGCAGCCCAGGAGAAGAGAGATGGGGGTTCCCTTCTTCTCTTCTCTCAGATGCATGGTGGACTTAG

CircID chr17:58280617|58280838
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MHGGLRTLLGWGSHCRDEAASGPSRAPGHSGHAPAL
Nucleotide Sequence ATGCATGGTGGACTTAGGACCTTGCTGGGCTGGGGGTCTCACTGCAGAGATGAAGCTGCTTCTGGCCCTAGCAGGGCTCCTGGCCATTCTGGCCACGCCCCAGCCCTCTGA

CircID chr17:58280617|58280838
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MGVPFFSSLRCMVDLGPCWAGGLTAEMKLLLALAGLLAILATPQPSE
Nucleotide Sequence ATGGGGGTTCCCTTCTTCTCTTCTCTCAGATGCATGGTGGACTTAGGACCTTGCTGGGCTGGGGGTCTCACTGCAGAGATGAAGCTGCTTCTGGCCCTAGCAGGGCTCCTGGCCATTCTGGCCACGCCCCAGCCCTCTGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites