CircRNA Information

General Information
circRNA Basic Information
CircID chr17:58305594|58305893
Strand -
CircType exon
Host Gene ENSG00000005379.14;
Algorism CIRI2;
Sequence CATGGAGTGGGGAGCTTTCAGGTCAGCAGAGGGGACCAGCTTAGGGGGGCCTGCAGGGGGAGTAGGAGAAGACTCTGGACTCTCTGGAGAGCCCTACACCCCATCCTGTCTTCTGCCCCGGACCCCTGCTGACCCCCTGTCACCACCTCCCCACTAGCTGTAGCCAATGGGGCGAGGCCAGAGGGGCCACCCACCCTATCTCCTTCCCCAGCCTCCCGGGCCCAGGGATATTCCTTCACCTGGACAGGGCTGGGCAGGGCCTTCCGACTCAGCTGTGGAAAGAATGTGCCTGTGAGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:58305594|58305893 hsa-miR-198 0 0 1
chr17:58305594|58305893 hsa-miR-214-5p 0 0 1
chr17:58305594|58305893 hsa-miR-214-3p 0 0 1
chr17:58305594|58305893 hsa-miR-608 1 0 1
chr17:58305594|58305893 hsa-miR-631 0 0 1
chr17:58305594|58305893 hsa-miR-766-5p 0 0 1
chr17:58305594|58305893 hsa-miR-766-3p 0 0 1
chr17:58305594|58305893 hsa-miR-298 1 1 1
chr17:58305594|58305893 hsa-miR-922 0 0 1
chr17:58305594|58305893 hsa-miR-924 0 0 1
chr17:58305594|58305893 hsa-miR-939-5p 0 0 1
chr17:58305594|58305893 hsa-miR-939-3p 0 0 1
chr17:58305594|58305893 hsa-miR-942-5p 0 0 1
chr17:58305594|58305893 hsa-miR-942-3p 0 0 1
chr17:58305594|58305893 hsa-miR-663b 0 1 1
chr17:58305594|58305893 hsa-miR-1205 0 0 1
chr17:58305594|58305893 hsa-miR-1291 0 0 1
chr17:58305594|58305893 hsa-miR-1293 0 0 1
chr17:58305594|58305893 hsa-miR-1252-5p 0 0 1
chr17:58305594|58305893 hsa-miR-1252-3p 0 0 1
chr17:58305594|58305893 hsa-miR-125a-3p 0 1 1
chr17:58305594|58305893 hsa-miR-296-5p 0 0 1
chr17:58305594|58305893 hsa-miR-491-5p 0 0 1
chr17:58305594|58305893 hsa-miR-486-3p 1 1 1
chr17:58305594|58305893 hsa-miR-615-5p 0 0 1
chr17:58305594|58305893 hsa-miR-485-5p 0 0 1
chr17:58305594|58305893 hsa-miR-146b-3p 0 0 1
chr17:58305594|58305893 hsa-miR-339-5p 0 0 1
chr17:58305594|58305893 hsa-miR-525-5p 0 0 1
chr17:58305594|58305893 hsa-miR-188-5p 0 0 1
chr17:58305594|58305893 hsa-miR-513a-5p 0 0 1
chr17:58305594|58305893 hsa-miR-628-5p 0 0 1
chr17:58305594|58305893 hsa-miR-342-5p 0 0 1
chr17:58305594|58305893 hsa-miR-520a-5p 0 0 1
chr17:58305594|58305893 hsa-miR-542-3p 0 0 1
chr17:58305594|58305893 hsa-miR-220c 0 0 1
chr17:58305594|58305893 hsa-miR-602 1 0 0
chr17:58305594|58305893 hsa-miR-637 1 0 0
chr17:58305594|58305893 hsa-miR-638 1 0 0
chr17:58305594|58305893 hsa-miR-645 1 0 0
chr17:58305594|58305893 hsa-miR-661 1 0 0
chr17:58305594|58305893 hsa-miR-658 1 0 0
chr17:58305594|58305893 hsa-miR-762 1 0 0
chr17:58305594|58305893 hsa-miR-665 1 0 0
chr17:58305594|58305893 hsa-miR-940 1 0 0
chr17:58305594|58305893 hsa-miR-1268a 1 0 0
chr17:58305594|58305893 hsa-miR-1538 1 1 0
chr17:58305594|58305893 hsa-miR-1976 0 1 0
chr17:58305594|58305893 hsa-miR-2861 1 0 0
chr17:58305594|58305893 hsa-miR-3132 1 0 0
chr17:58305594|58305893 hsa-miR-3147 1 0 0
chr17:58305594|58305893 hsa-miR-3176 0 1 0
chr17:58305594|58305893 hsa-miR-3196 1 0 0
chr17:58305594|58305893 hsa-miR-3197 1 0 0
chr17:58305594|58305893 hsa-miR-4269 1 0 0
chr17:58305594|58305893 hsa-miR-4270 1 0 0
chr17:58305594|58305893 hsa-miR-4271 1 1 0
chr17:58305594|58305893 hsa-miR-4281 1 0 0
chr17:58305594|58305893 hsa-miR-4286 0 1 0
chr17:58305594|58305893 hsa-miR-4292 0 1 0
chr17:58305594|58305893 hsa-miR-3685 0 1 0
chr17:58305594|58305893 hsa-miR-1268b 1 0 0
chr17:58305594|58305893 hsa-miR-4437 0 1 0
chr17:58305594|58305893 hsa-miR-3135b 1 0 0
chr17:58305594|58305893 hsa-miR-4476 1 0 0
chr17:58305594|58305893 hsa-miR-3689c 1 0 0
chr17:58305594|58305893 hsa-miR-4493 0 1 0
chr17:58305594|58305893 hsa-miR-4497 1 0 0
chr17:58305594|58305893 hsa-miR-4505 1 1 0
chr17:58305594|58305893 hsa-miR-2392 1 1 0
chr17:58305594|58305893 hsa-miR-4510 0 1 0
chr17:58305594|58305893 hsa-miR-4533 0 1 0
chr17:58305594|58305893 hsa-miR-1587 1 0 0
chr17:58305594|58305893 hsa-miR-4651 1 0 0
chr17:58305594|58305893 hsa-miR-4656 1 0 0
chr17:58305594|58305893 hsa-miR-4674 0 1 0
chr17:58305594|58305893 hsa-miR-4688 1 0 0
chr17:58305594|58305893 hsa-miR-4689 1 0 0
chr17:58305594|58305893 hsa-miR-4706 1 0 0
chr17:58305594|58305893 hsa-miR-4739 1 0 0
chr17:58305594|58305893 hsa-miR-4741 1 0 0
chr17:58305594|58305893 hsa-miR-4748 1 0 0
chr17:58305594|58305893 hsa-miR-4767 1 0 0
chr17:58305594|58305893 hsa-miR-4785 0 1 0
chr17:58305594|58305893 hsa-miR-5090 1 1 0
chr17:58305594|58305893 hsa-miR-5572 1 1 0
chr17:58305594|58305893 hsa-miR-5787 1 1 0
chr17:58305594|58305893 hsa-miR-6069 1 0 0
chr17:58305594|58305893 hsa-miR-6085 1 0 0
chr17:58305594|58305893 hsa-miR-6086 1 0 0
chr17:58305594|58305893 hsa-miR-6127 1 0 0
chr17:58305594|58305893 hsa-miR-6133 1 0 0
chr17:58305594|58305893 hsa-miR-8077 0 1 0
chr17:58305594|58305893 hsa-miR-8089 1 1 0
chr17:58305594|58305893 hsa-miR-9718 0 1 0
chr17:58305594|58305893 hsa-miR-93-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6747-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6861-5p 1 0 0
chr17:58305594|58305893 hsa-miR-7106-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6825-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6894-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6857-5p 1 0 0
chr17:58305594|58305893 hsa-miR-3692-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6799-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6510-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6089 1 0 0
chr17:58305594|58305893 hsa-miR-6746-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6890-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6727-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6842-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6721-5p 1 0 0
chr17:58305594|58305893 hsa-miR-197-5p 1 0 0
chr17:58305594|58305893 hsa-miR-3189-5p 0 1 0
chr17:58305594|58305893 hsa-miR-4728-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6845-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6742-5p 1 0 0
chr17:58305594|58305893 hsa-miR-3151-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6796-3p 0 1 0
chr17:58305594|58305893 hsa-miR-3180-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6748-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6772-5p 0 1 0
chr17:58305594|58305893 hsa-miR-185-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6732-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6798-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6782-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6810-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6740-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6786-5p 1 0 0
chr17:58305594|58305893 hsa-miR-1226-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6740-5p 1 0 0
chr17:58305594|58305893 hsa-miR-4763-5p 0 1 0
chr17:58305594|58305893 hsa-miR-1229-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6784-5p 1 0 0
chr17:58305594|58305893 hsa-miR-4640-5p 1 0 0
chr17:58305594|58305893 hsa-miR-1908-5p 1 0 0
chr17:58305594|58305893 hsa-miR-7113-3p 0 1 0
chr17:58305594|58305893 hsa-miR-296-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6771-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6749-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6847-5p 0 1 0
chr17:58305594|58305893 hsa-miR-4787-5p 1 0 0
chr17:58305594|58305893 hsa-miR-149-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6824-5p 1 0 0
chr17:58305594|58305893 hsa-miR-7156-3p 1 0 0
chr17:58305594|58305893 hsa-miR-4715-5p 1 0 0
chr17:58305594|58305893 hsa-miR-135b-3p 0 1 0
chr17:58305594|58305893 hsa-miR-1237-3p 1 0 0
chr17:58305594|58305893 hsa-miR-4727-3p 0 1 0
chr17:58305594|58305893 hsa-miR-2276-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6826-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6792-5p 1 0 0
chr17:58305594|58305893 hsa-miR-5088-3p 1 0 0
chr17:58305594|58305893 hsa-miR-4749-3p 0 1 0
chr17:58305594|58305893 hsa-miR-328-3p 1 1 0
chr17:58305594|58305893 hsa-miR-5589-3p 1 0 0
chr17:58305594|58305893 hsa-miR-3173-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6779-3p 0 1 0
chr17:58305594|58305893 hsa-miR-1207-5p 1 0 0
chr17:58305594|58305893 hsa-miR-1233-5p 1 0 0
chr17:58305594|58305893 hsa-miR-3689b-3p 1 0 0
chr17:58305594|58305893 hsa-miR-4763-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6769b-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6778-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6787-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6816-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6865-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6775-5p 1 1 0
chr17:58305594|58305893 hsa-miR-1343-5p 1 0 0
chr17:58305594|58305893 hsa-miR-3180 1 0 0
chr17:58305594|58305893 hsa-miR-6726-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6737-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6743-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6752-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6754-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6756-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6803-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6813-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6819-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6851-5p 1 1 0
chr17:58305594|58305893 hsa-miR-7107-5p 1 0 0
chr17:58305594|58305893 hsa-miR-7110-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6722-3p 1 1 0
chr17:58305594|58305893 hsa-miR-6751-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6763-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6779-5p 1 0 0
chr17:58305594|58305893 hsa-miR-7111-5p 1 1 0
chr17:58305594|58305893 hsa-miR-3127-3p 1 0 0
chr17:58305594|58305893 hsa-miR-3620-5p 1 0 0
chr17:58305594|58305893 hsa-miR-4728-5p 1 0 0
chr17:58305594|58305893 hsa-miR-5196-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6780b-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6836-5p 1 0 0
chr17:58305594|58305893 hsa-miR-1237-5p 1 0 0
chr17:58305594|58305893 hsa-miR-1909-3p 1 1 0
chr17:58305594|58305893 hsa-miR-328-5p 1 1 0
chr17:58305594|58305893 hsa-miR-3689a-3p 1 0 0
chr17:58305594|58305893 hsa-miR-4649-5p 1 0 0
chr17:58305594|58305893 hsa-miR-4725-3p 1 1 0
chr17:58305594|58305893 hsa-miR-4745-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6735-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6846-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6848-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6858-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6883-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6889-5p 1 0 0
chr17:58305594|58305893 hsa-miR-4758-5p 1 0 0
chr17:58305594|58305893 hsa-miR-1910-3p 1 1 0
chr17:58305594|58305893 hsa-miR-6511a-5p 1 0 0
chr17:58305594|58305893 hsa-miR-6799-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6773-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6855-5p 1 0 0
chr17:58305594|58305893 hsa-miR-4700-5p 0 1 0
chr17:58305594|58305893 hsa-miR-4747-5p 1 1 0
chr17:58305594|58305893 hsa-miR-4667-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6724-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6791-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6805-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6810-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6775-3p 0 1 0
chr17:58305594|58305893 hsa-miR-4723-3p 1 1 0
chr17:58305594|58305893 hsa-miR-6769b-3p 1 0 0
chr17:58305594|58305893 hsa-miR-6884-5p 1 1 0
chr17:58305594|58305893 hsa-miR-10394-5p 0 1 0
chr17:58305594|58305893 hsa-miR-1234-3p 1 0 0
chr17:58305594|58305893 hsa-miR-3619-5p 1 1 0
chr17:58305594|58305893 hsa-miR-6824-3p 0 1 0
chr17:58305594|58305893 hsa-miR-6811-5p 0 1 0
chr17:58305594|58305893 hsa-miR-6843-3p 1 0 0
chr17:58305594|58305893 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:58305594|58305893
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MEWGAFRSAEGTSLGGPAGGVGEDSGLSGEPYTPSCLLPRTPADPLSPPPH
Nucleotide Sequence ATGGAGTGGGGAGCTTTCAGGTCAGCAGAGGGGACCAGCTTAGGGGGGCCTGCAGGGGGAGTAGGAGAAGACTCTGGACTCTCTGGAGAGCCCTACACCCCATCCTGTCTTCTGCCCCGGACCCCTGCTGACCCCCTGTCACCACCTCCCCACTAG
CircID chr17:58305594|58305893
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MGRGQRGHPPYLLPQPPGPRDIPSPGQGWAGPSDSAVERMCL
Nucleotide Sequence ATGGGGCGAGGCCAGAGGGGCCACCCACCCTATCTCCTTCCCCAGCCTCCCGGGCCCAGGGATATTCCTTCACCTGGACAGGGCTGGGCAGGGCCTTCCGACTCAGCTGTGGAAAGAATGTGCCTGTGA
CircID chr17:58305594|58305893
ORF Type ORF3
Protein Length 75
Nucleotide Length 225
Protein Sequence MDSLESPTPHPVFCPGPLLTPCHHLPTSCSQWGEARGATHPISFPSLPGPGIFLHLDRAGQGLPTQLWKECACEP
Nucleotide Sequence CTGGACTCTCTGGAGAGCCCTACACCCCATCCTGTCTTCTGCCCCGGACCCCTGCTGACCCCCTGTCACCACCTCCCCACTAGCTGTAGCCAATGGGGCGAGGCCAGAGGGGCCACCCACCCTATCTCCTTCCCCAGCCTCCCGGGCCCAGGGATATTCCTTCACCTGGACAGGGCTGGGCAGGGCCTTCCGACTCAGCTGTGGAAAGAATGTGCCTGTGAGCCC
CircID chr17:58305594|58305893
ORF Type ORF4
Protein Length 84
Nucleotide Length 255
Protein Sequence MSRKALPSPVQVKEYPWAREAGEGDRVGGPSGLAPLATASGEVVTGGQQGSGAEDRMGCRALQRVQSLLLLPLQAPLSWSPLLT
Nucleotide Sequence CTGAGTCGGAAGGCCCTGCCCAGCCCTGTCCAGGTGAAGGAATATCCCTGGGCCCGGGAGGCTGGGGAAGGAGATAGGGTGGGTGGCCCCTCTGGCCTCGCCCCATTGGCTACAGCTAGTGGGGAGGTGGTGACAGGGGGTCAGCAGGGGTCCGGGGCAGAAGACAGGATGGGGTGTAGGGCTCTCCAGAGAGTCCAGAGTCTTCTCCTACTCCCCCTGCAGGCCCCCCTAAGCTGGTCCCCTCTGCTGACCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab