CircRNA Information

General Information
circRNA Basic Information
CircID chr17:58346070|58346245
Strand -
CircType exon
Host Gene ENSG00000213246.5;
Algorism CIRI2;
Sequence CCCACCTGTAGTCCAAAGAAGATAAAATGATAAAATGATGTGCTGCTCTCTCAACAGTCAGCTGAGTCTGAATTGGAGGGTAGGAAGTATTTGAAGTTCTGTTCATTTAGTTCCAGAACAAGAAATAAGCAGAGGCAGGAGGTGGAGAGCAAAGATGCTGGCAGCCTTGCATCTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:58346070|58346245 hsa-miR-15a-5p 0 0 1
chr17:58346070|58346245 hsa-miR-15a-3p 0 0 1
chr17:58346070|58346245 hsa-miR-15b-5p 0 0 1
chr17:58346070|58346245 hsa-miR-15b-3p 0 0 1
chr17:58346070|58346245 hsa-miR-195-5p 0 0 1
chr17:58346070|58346245 hsa-miR-195-3p 0 0 1
chr17:58346070|58346245 hsa-miR-424-5p 0 0 1
chr17:58346070|58346245 hsa-miR-424-3p 0 0 1
chr17:58346070|58346245 hsa-miR-497-5p 0 0 1
chr17:58346070|58346245 hsa-miR-497-3p 0 0 1
chr17:58346070|58346245 hsa-miR-552-5p 0 0 1
chr17:58346070|58346245 hsa-miR-552-3p 0 0 1
chr17:58346070|58346245 hsa-miR-578 0 0 1
chr17:58346070|58346245 hsa-miR-607 0 0 1
chr17:58346070|58346245 hsa-miR-943 0 1 1
chr17:58346070|58346245 hsa-miR-1202 0 0 1
chr17:58346070|58346245 hsa-miR-1299 0 1 1
chr17:58346070|58346245 hsa-miR-1267 0 0 1
chr17:58346070|58346245 hsa-miR-512-5p 0 0 1
chr17:58346070|58346245 hsa-miR-1207-3p 0 0 1
chr17:58346070|58346245 hsa-miR-875-3p 0 0 1
chr17:58346070|58346245 hsa-miR-338-3p 0 1 1
chr17:58346070|58346245 hsa-miR-16 0 0 1
chr17:58346070|58346245 hsa-miR-9 0 0 1
chr17:58346070|58346245 hsa-miR-1269 0 0 1
chr17:58346070|58346245 hsa-miR-516b 0 0 1
chr17:58346070|58346245 hsa-miR-1281 1 0 0
chr17:58346070|58346245 hsa-miR-1976 1 1 0
chr17:58346070|58346245 hsa-miR-2278 0 1 0
chr17:58346070|58346245 hsa-miR-3685 0 1 0
chr17:58346070|58346245 hsa-miR-9903 0 1 0
chr17:58346070|58346245 hsa-miR-4687-3p 1 1 0
chr17:58346070|58346245 hsa-miR-7110-3p 1 0 0
chr17:58346070|58346245 hsa-miR-6787-3p 0 1 0
chr17:58346070|58346245 hsa-miR-6882-3p 1 0 0
chr17:58346070|58346245 hsa-miR-4436b-5p 1 0 0
chr17:58346070|58346245 hsa-miR-7850-5p 0 1 0
chr17:58346070|58346245 hsa-miR-4708-3p 0 1 0
chr17:58346070|58346245 hsa-miR-1224-3p 1 0 0
chr17:58346070|58346245 hsa-miR-4529-3p 0 1 0
chr17:58346070|58346245 hsa-miR-7152-5p 0 1 0
chr17:58346070|58346245 hsa-miR-16-5p 0 1 0
chr17:58346070|58346245 hsa-miR-6726-5p 1 0 0
chr17:58346070|58346245 hsa-miR-6879-5p 1 0 0
chr17:58346070|58346245 hsa-miR-6754-3p 1 1 0
chr17:58346070|58346245 hsa-miR-6735-5p 1 0 0
chr17:58346070|58346245 hsa-miR-6731-5p 1 1 0
chr17:58346070|58346245 hsa-miR-6856-5p 1 0 0
chr17:58346070|58346245 hsa-miR-6791-3p 1 0 0
chr17:58346070|58346245 hsa-miR-4722-3p 1 0 0
chr17:58346070|58346245 hsa-miR-6893-3p 1 0 0
chr17:58346070|58346245 hsa-miR-6792-3p 1 0 0
chr17:58346070|58346245 hsa-miR-6805-3p 1 0 0
chr17:58346070|58346245 hsa-miR-6511b-3p 1 0 0
chr17:58346070|58346245 hsa-miR-5699-3p 1 1 0
chr17:58346070|58346245 hsa-miR-4724-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:58346070|58346245
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MLSQQSAESELEGRKYLKFCSFSSRTRNKQRQEVESKDAGSLAS
Nucleotide Sequence CTGCTCTCTCAACAGTCAGCTGAGTCTGAATTGGAGGGTAGGAAGTATTTGAAGTTCTGTTCATTTAGTTCCAGAACAAGAAATAAGCAGAGGCAGGAGGTGGAGAGCAAAGATGCTGGCAGCCTTGCATCT
CircID chr17:58346070|58346245
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MPASLLSTSCLCLFLVLELNEQNFKYFLPSNSDSADC
Nucleotide Sequence CTGCCAGCATCTTTGCTCTCCACCTCCTGCCTCTGCTTATTTCTTGTTCTGGAACTAAATGAACAGAACTTCAAATACTTCCTACCCTCCAATTCAGACTCAGCTGACTGTTGA
CircID chr17:58346070|58346245
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MNRTSNTSYPPIQTQLTVERAAHHFIILSSLDYRW
Nucleotide Sequence ATGAACAGAACTTCAAATACTTCCTACCCTCCAATTCAGACTCAGCTGACTGTTGAGAGAGCAGCACATCATTTTATCATTTTATCTTCTTTGGACTACAGGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab