CircNet

General Information

circRNA Basic Information

CircID	chr17:59655854\|59661643
Strand	+
CircType	exon
Host Gene	ENSG00000141367.11;
Algorism	CIRI2;find_circ;DCC;
Sequence	ATCAGTGAAAAGCATGATGTGGTGTTCTTGATAACCAAGTATGGTTATATCCACCTCTATGATCTTGAGACTGGTACCTGCATCTACATGAATAGAATCAGTGGAGAAACAATTTTTGTTACTGCACCTCATGAAGCCACAGCTGGAATAATTGGAGTAAACAGAAAGGGACAAGTTCTGTCAGTGTGTGTGGAAGAAGAAAACATAATTCCTTACATCACCAATGTTCTACAAAATCCTGATTTGGCTCTGAGAATGGCTGTACGTAATAACTTAGCCGGTGCTGAAGAACTCTTTGCCCGGAAATTTAATGCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGTACTCCAGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAAACTTCTCCTCTACTTCAGTACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAAATACGAATCCTTAGAGCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTTTTGGAGAAATGGTTAAAAGAAGATAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:59655854\|59661643	hsa-miR-22-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:59655854\|59661643
ORF Type	ORF1
Protein Length	162
Nucleotide Length	486
Protein Sequence	MNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDK
Nucleotide Sequence	ATGAATAGAATCAGTGGAGAAACAATTTTTGTTACTGCACCTCATGAAGCCACAGCTGGAATAATTGGAGTAAACAGAAAGGGACAAGTTCTGTCAGTGTGTGTGGAAGAAGAAAACATAATTCCTTACATCACCAATGTTCTACAAAATCCTGATTTGGCTCTGAGAATGGCTGTACGTAATAACTTAGCCGGTGCTGAAGAACTCTTTGCCCGGAAATTTAATGCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGTACTCCAGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAAACTTCTCCTCTACTTCAGTACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAAATACGAATCCTTAGAGCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTTTTGGAGAAATGGTTAAAAGAAGATAAG

CircID	chr17:59655854\|59661643
ORF Type	ORF2
Protein Length	65
Nucleotide Length	195
Protein Sequence	MLFLPREITRRQQRWLLMHQREFFVLQTLSVGSRVSQPSQVKLLLYFSTLVSFWTRDSSTNTNP*
Nucleotide Sequence	ATGCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGTACTCCAGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAAACTTCTCCTCTACTTCAGTACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAAATACGAATCCTTAG

CircID	chr17:59655854\|59661643
ORF Type	ORF3
Protein Length	44
Nucleotide Length	132
Protein Sequence	MRCSNKNCFSTDSIHVDAGTSLKIIEVDITILGYQEHHIMLFTD
Nucleotide Sequence	ATGAGGTGCAGTAACAAAAATTGTTTCTCCACTGATTCTATTCATGTAGATGCAGGTACCAGTCTCAAGATCATAGAGGTGGATATAACCATACTTGGTTATCAAGAACACCACATCATGCTTTTCACTGAT

CircID	chr17:59655854\|59661643
ORF Type	ORF4
Protein Length	54
Nucleotide Length	162
Protein Sequence	LTWLGWDTLEPTDSVWSTKNSLWCISSHLCCLRVISLGKKSIKFPGKEFFSTG*
Nucleotide Sequence	TTGACCTGGCTGGGCTGGGACACTCTGGAACCGACGGATAGTGTCTGGAGTACGAAGAATTCCCTTTGGTGCATTAGCAGCCACCTTTGCTGCCTCCGAGTAATTTCCCTGGGCAAAAAGAGCATTAAATTTCCGGGCAAAGAGTTCTTCAGCACCGGCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:59655854\|59661643	RBM5	0	0	1
chr17:59655854\|59661643	U2AF2	6	7	14
chr17:59655854\|59661643	ELAVL1	6	2	4
chr17:59655854\|59661643	FAM120A	0	0	2
chr17:59655854\|59661643	SF3A3	1	0	0
chr17:59655854\|59661643	CNBP	0	0	2
chr17:59655854\|59661643	DDX42	0	0	3
chr17:59655854\|59661643	UPF1	1	1	2
chr17:59655854\|59661643	SRSF10	0	0	1
chr17:59655854\|59661643	TNRC6A	0	0	5
chr17:59655854\|59661643	FMR1	1	0	24
chr17:59655854\|59661643	CPSF6	0	0	1
chr17:59655854\|59661643	SAFB2	0	0	1
chr17:59655854\|59661643	FUS	0	1	1
chr17:59655854\|59661643	DGCR8	1	0	7
chr17:59655854\|59661643	SRSF7	0	0	1
chr17:59655854\|59661643	KHSRP	1	0	0
chr17:59655854\|59661643	SRSF1	0	0	6
chr17:59655854\|59661643	NOP58	1	1	8
chr17:59655854\|59661643	U2AF1	0	0	9
chr17:59655854\|59661643	NOP56	0	0	3
chr17:59655854\|59661643	SRSF9	0	0	4
chr17:59655854\|59661643	TIAL1	0	1	0
chr17:59655854\|59661643	DDX54	3	2	12
chr17:59655854\|59661643	SMNDC1	1	0	5
chr17:59655854\|59661643	RBM10	2	0	0
chr17:59655854\|59661643	HNRNPL	0	1	0
chr17:59655854\|59661643	HNRNPA2B1	0	0	5
chr17:59655854\|59661643	MSI2	0	1	1
chr17:59655854\|59661643	PTBP1	0	0	7
chr17:59655854\|59661643	HNRNPC	0	1	0
chr17:59655854\|59661643	TRA2A	0	1	11
chr17:59655854\|59661643	HNRNPM	0	0	1
chr17:59655854\|59661643	NONO	0	0	1
chr17:59655854\|59661643	ZNF184	0	1	5
chr17:59655854\|59661643	HNRNPA1	0	1	0
chr17:59655854\|59661643	ZC3H7B	2	0	2
chr17:59655854\|59661643	LARP7	1	0	2
chr17:59655854\|59661643	SBDS	0	0	3
chr17:59655854\|59661643	AUH	0	0	3
chr17:59655854\|59661643	ACIN1	2	0	11
chr17:59655854\|59661643	LIN28B	1	2	14
chr17:59655854\|59661643	LIN28A	0	0	2
chr17:59655854\|59661643	RANGAP1	0	0	1
chr17:59655854\|59661643	FXR1	0	0	6
chr17:59655854\|59661643	FXR2	0	0	7
chr17:59655854\|59661643	SND1	0	0	10
chr17:59655854\|59661643	IGF2BP1	0	0	16
chr17:59655854\|59661643	BUD13	1	0	3
chr17:59655854\|59661643	IGF2BP3	0	0	8
chr17:59655854\|59661643	IGF2BP2	2	4	20
chr17:59655854\|59661643	NPM1	0	0	2
chr17:59655854\|59661643	HNRNPUL1	0	0	3
chr17:59655854\|59661643	TARDBP	0	0	3
chr17:59655854\|59661643	DICER1	0	0	1
chr17:59655854\|59661643	RBFOX2	0	1	1
chr17:59655854\|59661643	PRPF8	0	2	2
chr17:59655854\|59661643	SLTM	0	0	4
chr17:59655854\|59661643	EIF4G2	0	0	4
chr17:59655854\|59661643	RBM47	1	0	3
chr17:59655854\|59661643	CSTF2T	1	1	3
chr17:59655854\|59661643	BCCIP	0	0	1
chr17:59655854\|59661643	TIA1	0	0	2
chr17:59655854\|59661643	RBM27	0	0	1
chr17:59655854\|59661643	LARP4B	0	0	1
chr17:59655854\|59661643	RBM22	0	1	0
chr17:59655854\|59661643	XRN2	0	1	3
chr17:59655854\|59661643	YWHAG	1	0	2
chr17:59655854\|59661643	FBL	0	1	7
chr17:59655854\|59661643	AGO1	0	0	2
chr17:59655854\|59661643	EWSR1	0	0	2
chr17:59655854\|59661643	EIF4A3	1	5	7
chr17:59655854\|59661643	AGO2	0	1	21

CircRNA Information