CircRNA Information

General Information
circRNA Basic Information
CircID chr17:59706521|59706626
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTTCCCAAATCTTCTCTGACCCTTAAGCCACTGCCCCACTTTCCCTGTATAACATATTCCCAGAGTCTAGTATGGTGCCTGGGGTATGTCAGTAAGGATTAATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:59706521|59706626 hsa-miR-34a-5p 0 0 1
chr17:59706521|59706626 hsa-miR-34a-3p 0 0 1
chr17:59706521|59706626 hsa-miR-326 0 0 1
chr17:59706521|59706626 hsa-miR-449a 0 0 1
chr17:59706521|59706626 hsa-miR-449b-5p 0 0 1
chr17:59706521|59706626 hsa-miR-449b-3p 0 0 1
chr17:59706521|59706626 hsa-miR-1253 0 0 1
chr17:59706521|59706626 hsa-miR-28-3p 0 0 1
chr17:59706521|59706626 hsa-miR-486-3p 0 0 1
chr17:59706521|59706626 hsa-miR-767-5p 0 0 1
chr17:59706521|59706626 hsa-miR-330-5p 1 1 1
chr17:59706521|59706626 hsa-miR-34c-5p 0 0 1
chr17:59706521|59706626 hsa-miR-500 0 0 1
chr17:59706521|59706626 hsa-miR-760 1 0 0
chr17:59706521|59706626 hsa-miR-1182 1 0 0
chr17:59706521|59706626 hsa-miR-3132 1 0 0
chr17:59706521|59706626 hsa-miR-378b 1 0 0
chr17:59706521|59706626 hsa-miR-3147 1 0 0
chr17:59706521|59706626 hsa-miR-3153 1 1 0
chr17:59706521|59706626 hsa-miR-378c 1 0 0
chr17:59706521|59706626 hsa-miR-4314 0 1 0
chr17:59706521|59706626 hsa-miR-4269 0 1 0
chr17:59706521|59706626 hsa-miR-4270 1 0 0
chr17:59706521|59706626 hsa-miR-4481 1 0 0
chr17:59706521|59706626 hsa-miR-4673 0 1 0
chr17:59706521|59706626 hsa-miR-4688 1 0 0
chr17:59706521|59706626 hsa-miR-5090 1 0 0
chr17:59706521|59706626 hsa-miR-5192 1 0 0
chr17:59706521|59706626 hsa-miR-8089 1 0 0
chr17:59706521|59706626 hsa-miR-135a-3p 1 0 0
chr17:59706521|59706626 hsa-miR-150-3p 1 0 0
chr17:59706521|59706626 hsa-miR-128-1-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6765-5p 1 0 0
chr17:59706521|59706626 hsa-miR-125b-1-3p 1 0 0
chr17:59706521|59706626 hsa-miR-6825-5p 1 0 0
chr17:59706521|59706626 hsa-miR-3192-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6730-5p 1 0 0
chr17:59706521|59706626 hsa-miR-593-5p 0 1 0
chr17:59706521|59706626 hsa-miR-6890-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6721-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4655-5p 1 0 0
chr17:59706521|59706626 hsa-miR-197-5p 1 0 0
chr17:59706521|59706626 hsa-miR-7845-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6716-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6871-5p 1 0 0
chr17:59706521|59706626 hsa-miR-3151-5p 1 1 0
chr17:59706521|59706626 hsa-miR-3180-3p 1 0 0
chr17:59706521|59706626 hsa-miR-2467-3p 1 0 0
chr17:59706521|59706626 hsa-miR-6786-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6835-5p 1 0 0
chr17:59706521|59706626 hsa-miR-5088-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6802-5p 1 0 0
chr17:59706521|59706626 hsa-miR-5584-5p 0 1 0
chr17:59706521|59706626 hsa-miR-423-5p 1 0 0
chr17:59706521|59706626 hsa-miR-500a-5p 0 1 0
chr17:59706521|59706626 hsa-miR-6801-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4750-5p 1 0 0
chr17:59706521|59706626 hsa-miR-1207-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4763-3p 1 0 0
chr17:59706521|59706626 hsa-miR-6816-5p 1 0 0
chr17:59706521|59706626 hsa-miR-3180 1 0 0
chr17:59706521|59706626 hsa-miR-6743-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6754-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6851-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6797-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6808-5p 1 0 0
chr17:59706521|59706626 hsa-miR-5196-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6780b-5p 1 0 0
chr17:59706521|59706626 hsa-miR-1237-5p 1 0 0
chr17:59706521|59706626 hsa-miR-328-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4725-3p 1 0 0
chr17:59706521|59706626 hsa-miR-4726-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4745-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6738-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6777-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4758-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6511b-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6731-5p 1 0 0
chr17:59706521|59706626 hsa-miR-3679-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4646-5p 1 0 0
chr17:59706521|59706626 hsa-miR-4747-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6766-5p 1 0 0
chr17:59706521|59706626 hsa-miR-1185-1-3p 1 1 0
chr17:59706521|59706626 hsa-miR-1185-2-3p 1 1 0
chr17:59706521|59706626 hsa-miR-6822-5p 1 0 0
chr17:59706521|59706626 hsa-miR-6715b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:59706521|59706626
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MTLKPLPHFPCITYSQSLVWCLGYVSKD
Nucleotide Sequence CTGACCCTTAAGCCACTGCCCCACTTTCCCTGTATAACATATTCCCAGAGTCTAGTATGGTGCCTGGGGTATGTCAGTAAGGATTAA
CircID chr17:59706521|59706626
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MTYPRHHTRLWEYVIQGKWGSGLRVREDLGK
Nucleotide Sequence CTGACATACCCCAGGCACCATACTAGACTCTGGGAATATGTTATACAGGGAAAGTGGGGCAGTGGCTTAAGGGTCAGAGAAGATTTGGGAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab