CircNet

General Information

circRNA Basic Information

CircID	chr17:60190563\|60209543
Strand	-
CircType	exon
Host Gene	ENSG00000170832.12;
Algorism	find_circ;CIRI2;CIRC
Sequence	TGACGACAGTATGGGCTATCAATATCCATTCACTCTACGAGTTGTGCAGAAAGATGGGAACTCCTGTGCTTGGTGCCCATGGTATAGATTTTGCAGAGGCTGTAAAATTGATTGTGGGGAAGACAGAGCTTTCATTGGAAATGCCTATATCGCTGTGGATTGGGATCCCACAGCCCTTCACCTTCGCTATCAAACATCCCAGGAAAGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:60190563\|60209543	hsa-miR-4687-3p	1	1	1
chr17:60190563\|60209543	hsa-miR-218-5p	0	1	1
chr17:60190563\|60209543	hsa-miR-1292-5p	1	1	1
chr17:60190563\|60209543	hsa-miR-6796-5p	1	1	1
chr17:60190563\|60209543	hsa-miR-2467-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:60190563\|60209543
ORF Type	ORF1
Protein Length	66
Nucleotide Length	198
Protein Sequence	MGYQYPFTLRVVQKDGNSCAWCPWYRFCRGCKIDCGEDRAFIGNAYIAVDWDPTALHLRYQTSQER
Nucleotide Sequence	ATGGGCTATCAATATCCATTCACTCTACGAGTTGTGCAGAAAGATGGGAACTCCTGTGCTTGGTGCCCATGGTATAGATTTTGCAGAGGCTGTAAAATTGATTGTGGGGAAGACAGAGCTTTCATTGGAAATGCCTATATCGCTGTGGATTGGGATCCCACAGCCCTTCACCTTCGCTATCAAACATCCCAGGAAAGG

CircID	chr17:60190563\|60209543
ORF Type	ORF2
Protein Length	51
Nucleotide Length	153
Protein Sequence	MGTPVLGAHGIDFAEAVKLIVGKTELSLEMPISLWIGIPQPFTFAIKHPRK
Nucleotide Sequence	ATGGGAACTCCTGTGCTTGGTGCCCATGGTATAGATTTTGCAGAGGCTGTAAAATTGATTGTGGGGAAGACAGAGCTTTCATTGGAAATGCCTATATCGCTGTGGATTGGGATCCCACAGCCCTTCACCTTCGCTATCAAACATCCCAGGAAA

CircID	chr17:60190563\|60209543
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MKALSSPQSILQPLQNLYHGHQAQEFPSFCTTRRVNGY*
Nucleotide Sequence	ATGAAAGCTCTGTCTTCCCCACAATCAATTTTACAGCCTCTGCAAAATCTATACCATGGGCACCAAGCACAGGAGTTCCCATCTTTCTGCACAACTCGTAGAGTGAATGGATATTGA

CircID	chr17:60190563\|60209543
ORF Type	ORF4
Protein Length	53
Nucleotide Length	159
Protein Sequence	LIAKVKGCGIPIHSDIGISNESSVFPTINFTASAKSIPWAPSTGVPIFLHNS*
Nucleotide Sequence	TTGATAGCGAAGGTGAAGGGCTGTGGGATCCCAATCCACAGCGATATAGGCATTTCCAATGAAAGCTCTGTCTTCCCCACAATCAATTTTACAGCCTCTGCAAAATCTATACCATGGGCACCAAGCACAGGAGTTCCCATCTTTCTGCACAACTCGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:60190563\|60209543	NOP56	0	1	0
chr17:60190563\|60209543	ELAVL1	1	1	0
chr17:60190563\|60209543	ADAR	1	0	0
chr17:60190563\|60209543	U2AF2	2	4	0
chr17:60190563\|60209543	CSTF2T	0	0	2
chr17:60190563\|60209543	TIAL1	0	1	0
chr17:60190563\|60209543	DDX54	0	0	9
chr17:60190563\|60209543	FUS	0	2	0
chr17:60190563\|60209543	RBM10	0	1	0
chr17:60190563\|60209543	TAF15	1	0	0
chr17:60190563\|60209543	FMR1	1	0	2
chr17:60190563\|60209543	HNRNPK	0	1	0
chr17:60190563\|60209543	TARDBP	1	0	0
chr17:60190563\|60209543	EIF4A3	0	1	5
chr17:60190563\|60209543	FBL	0	2	1

CircRNA Information