CircNet

General Information

circRNA Basic Information

CircID	chr17:60255175\|60265474
Strand	-
CircType	exon
Host Gene	ENSG00000170832.12;
Algorism	CIRI2;find_circ;CIRC
Sequence	GAATTACATATGGATCTCTCTGATATTGTAGAAGGCATACTGAATGCACATGACACCACAAAGATGGGTCATCTTACTCTGGAAGACTATCAGATCTGGAGTGTGAAAAATGTTCTTGCCAATGAGTTTTTGAACCTCCTTTTCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:60255175\|60265474	hsa-miR-122-5p	0	1	1
chr17:60255175\|60265474	hsa-miR-7-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:60255175\|60265474
ORF Type	ORF1
Protein Length	46
Nucleotide Length	138
Protein Sequence	MDLSDIVEGILNAHDTTKMGHLTLEDYQIWSVKNVLANEFLNLLFQ
Nucleotide Sequence	ATGGATCTCTCTGATATTGTAGAAGGCATACTGAATGCACATGACACCACAAAGATGGGTCATCTTACTCTGGAAGACTATCAGATCTGGAGTGTGAAAAATGTTCTTGCCAATGAGTTTTTGAACCTCCTTTTCCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:60255175\|60265474	UCHL5	0	2	0
chr17:60255175\|60265474	AGGF1	0	4	0
chr17:60255175\|60265474	RPS11	0	1	0
chr17:60255175\|60265474	AARS	0	2	0
chr17:60255175\|60265474	MOV10	0	1	0
chr17:60255175\|60265474	FUS	3	0	0
chr17:60255175\|60265474	ZRANB2	0	5	0
chr17:60255175\|60265474	FAM120A	0	8	0
chr17:60255175\|60265474	SF3B1	0	5	0
chr17:60255175\|60265474	CELF2	0	31	0
chr17:60255175\|60265474	PRPF8	2	4	0
chr17:60255175\|60265474	RPS5	0	12	0
chr17:60255175\|60265474	UPF1	1	0	0
chr17:60255175\|60265474	ZNF622	0	1	0
chr17:60255175\|60265474	TAF15	3	1	0
chr17:60255175\|60265474	FMR1	4	4	0
chr17:60255175\|60265474	CPSF6	1	0	0
chr17:60255175\|60265474	CPSF4	1	0	0
chr17:60255175\|60265474	CNBP	1	0	0
chr17:60255175\|60265474	TROVE2	0	1	0
chr17:60255175\|60265474	ELAVL1	7	3	0
chr17:60255175\|60265474	DGCR8	0	35	0
chr17:60255175\|60265474	SRSF7	0	2	0
chr17:60255175\|60265474	DROSHA	0	33	0
chr17:60255175\|60265474	SRSF1	1	5	0
chr17:60255175\|60265474	NOP58	1	0	2
chr17:60255175\|60265474	GTF2F1	0	18	0
chr17:60255175\|60265474	U2AF2	11	0	0
chr17:60255175\|60265474	SRSF9	1	0	0
chr17:60255175\|60265474	HNRNPU	0	1	0
chr17:60255175\|60265474	DDX54	8	2	7
chr17:60255175\|60265474	LSM11	0	5	0
chr17:60255175\|60265474	AKAP8L	0	11	0
chr17:60255175\|60265474	PTBP1	4	0	0
chr17:60255175\|60265474	HNRNPC	7	4	0
chr17:60255175\|60265474	SAFB2	0	2	0
chr17:60255175\|60265474	LARP7	0	1	0
chr17:60255175\|60265474	XRCC6	0	1	0
chr17:60255175\|60265474	LIN28B	3	0	0
chr17:60255175\|60265474	LIN28A	1	0	0
chr17:60255175\|60265474	FXR1	2	0	0
chr17:60255175\|60265474	FXR2	1	0	0
chr17:60255175\|60265474	IGF2BP1	1	0	0
chr17:60255175\|60265474	FASTKD2	0	3	0
chr17:60255175\|60265474	IGF2BP2	3	1	2
chr17:60255175\|60265474	BUD13	1	0	0
chr17:60255175\|60265474	RBFOX2	0	8	0
chr17:60255175\|60265474	RBM47	0	0	1
chr17:60255175\|60265474	DDX24	0	4	0
chr17:60255175\|60265474	CSTF2T	1	17	2
chr17:60255175\|60265474	GEMIN5	0	11	0
chr17:60255175\|60265474	RBM22	0	2	0
chr17:60255175\|60265474	XRN2	0	2	0
chr17:60255175\|60265474	PPIL4	0	1	0
chr17:60255175\|60265474	FBL	1	0	0
chr17:60255175\|60265474	EWSR1	0	11	0
chr17:60255175\|60265474	EIF4A3	5	2	3
chr17:60255175\|60265474	AGO2	2	0	0

CircRNA Information