CircRNA Information

General Information
circRNA Basic Information
CircID chr17:60447621|60447801
Strand +
CircType exon
Host Gene ENSG00000062725.8;
Algorism CIRI2;
Sequence TAGAATATGATTATCGAGGTCTCATTAAACTTTACAACTCCATTGGAAATTACGAGAAAGTGTTTGAATATCACAATGTTCTGTCTAACTGGAACCGGTTGCGAGATCGGCAATATTCAGTGACAGATGCTCTTGAAGATGTCAGCACCAGCCCCCAGTCCACTGAAGAAGTGGTGCAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:60447621|60447801 hsa-miR-335-5p 0 0 1
chr17:60447621|60447801 hsa-miR-335-3p 0 0 1
chr17:60447621|60447801 hsa-miR-489-5p 0 0 1
chr17:60447621|60447801 hsa-miR-489-3p 0 0 1
chr17:60447621|60447801 hsa-miR-561-5p 0 0 1
chr17:60447621|60447801 hsa-miR-561-3p 0 0 1
chr17:60447621|60447801 hsa-miR-637 1 1 1
chr17:60447621|60447801 hsa-miR-668-5p 0 0 1
chr17:60447621|60447801 hsa-miR-668-3p 0 0 1
chr17:60447621|60447801 hsa-miR-1279 0 0 1
chr17:60447621|60447801 hsa-miR-1288-5p 0 0 1
chr17:60447621|60447801 hsa-miR-1288-3p 0 0 1
chr17:60447621|60447801 hsa-miR-769-5p 0 0 1
chr17:60447621|60447801 hsa-miR-145-5p 0 0 1
chr17:60447621|60447801 hsa-miR-767-5p 0 0 1
chr17:60447621|60447801 hsa-miR-671-3p 0 0 1
chr17:60447621|60447801 hsa-miR-628-5p 0 1 1
chr17:60447621|60447801 hsa-miR-1269 0 0 1
chr17:60447621|60447801 hsa-miR-138 0 0 1
chr17:60447621|60447801 hsa-miR-608 1 0 0
chr17:60447621|60447801 hsa-miR-762 1 1 0
chr17:60447621|60447801 hsa-miR-1269a 0 1 0
chr17:60447621|60447801 hsa-miR-4498 1 0 0
chr17:60447621|60447801 hsa-miR-4501 1 0 0
chr17:60447621|60447801 hsa-miR-4508 1 0 0
chr17:60447621|60447801 hsa-miR-1269b 0 1 0
chr17:60447621|60447801 hsa-miR-1587 1 0 0
chr17:60447621|60447801 hsa-miR-6070 0 1 0
chr17:60447621|60447801 hsa-miR-6085 1 0 0
chr17:60447621|60447801 hsa-miR-138-5p 1 1 0
chr17:60447621|60447801 hsa-miR-4731-5p 1 0 0
chr17:60447621|60447801 hsa-miR-8071 1 0 0
chr17:60447621|60447801 hsa-miR-6741-5p 1 0 0
chr17:60447621|60447801 hsa-miR-185-3p 0 1 0
chr17:60447621|60447801 hsa-miR-6773-3p 0 1 0
chr17:60447621|60447801 hsa-miR-4763-3p 1 0 0
chr17:60447621|60447801 hsa-miR-5001-5p 1 0 0
chr17:60447621|60447801 hsa-miR-6803-5p 1 0 0
chr17:60447621|60447801 hsa-miR-6813-5p 1 0 0
chr17:60447621|60447801 hsa-miR-6751-5p 1 0 0
chr17:60447621|60447801 hsa-miR-3620-5p 1 1 0
chr17:60447621|60447801 hsa-miR-1237-5p 1 0 0
chr17:60447621|60447801 hsa-miR-6846-5p 1 1 0
chr17:60447621|60447801 hsa-miR-6848-5p 1 1 0
chr17:60447621|60447801 hsa-miR-4697-5p 1 0 0
chr17:60447621|60447801 hsa-miR-6855-5p 1 0 0
chr17:60447621|60447801 hsa-miR-6849-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:60447621|60447801
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MIIEVSLNFTTPLEITRKCLNITMFCLTGTGCEIGNIQ
Nucleotide Sequence ATGATTATCGAGGTCTCATTAAACTTTACAACTCCATTGGAAATTACGAGAAAGTGTTTGAATATCACAATGTTCTGTCTAACTGGAACCGGTTGCGAGATCGGCAATATTCAGTGA

CircID chr17:60447621|60447801
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQ
Nucleotide Sequence CTGTCTAACTGGAACCGGTTGCGAGATCGGCAATATTCAGTGACAGATGCTCTTGAAGATGTCAGCACCAGCCCCCAGTCCACTGAAGAAGTGGTGCAG

CircID chr17:60447621|60447801
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MVLTSSRASVTEYCRSRNRFQLDRTL
Nucleotide Sequence CTGGTGCTGACATCTTCAAGAGCATCTGTCACTGAATATTGCCGATCTCGCAACCGGTTCCAGTTAGACAGAACATTGTGA

CircID chr17:60447621|60447801
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MPISQPVPVRQNIVIFKHFLVISNGVVKFNETSIIIF
Nucleotide Sequence TTGCCGATCTCGCAACCGGTTCCAGTTAGACAGAACATTGTGATATTCAAACACTTTCTCGTAATTTCCAATGGAGTTGTAAAGTTTAATGAGACCTCGATAATCATATTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites