CircNet

General Information

circRNA Basic Information

CircID	chr17:61907408\|61925099
Strand	-
CircType	exon
Host Gene	ENSG00000108506.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGAAAAAGAGAGACCAGCAGTTCTGTCCTTTGGCAGATGAGAAGGCAGCTTCTTCTGGAGTTGATGGGCATTCTTCCCACAGTAAGAAGCACCCGAATTGTGGAAGAAGCTGATGTGGATATGGAGCCCAATGTGTCTGTGTATTCGGGGCTGAAAGAAGAGCATGTTGTGAAAGCCAGTGCACTCTTACGTCTGTACTGTGCTTTGATGGGGATCGCTGGACTCAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:61907408\|61925099	hsa-miR-223-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:61907408\|61925099
ORF Type	ORF1
Protein Length	63
Nucleotide Length	189
Protein Sequence	MRRQLLLELMGILPTVRSTRIVEEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGL
Nucleotide Sequence	ATGAGAAGGCAGCTTCTTCTGGAGTTGATGGGCATTCTTCCCACAGTAAGAAGCACCCGAATTGTGGAAGAAGCTGATGTGGATATGGAGCCCAATGTGTCTGTGTATTCGGGGCTGAAAGAAGAGCATGTTGTGAAAGCCAGTGCACTCTTACGTCTGTACTGTGCTTTGATGGGGATCGCTGGACTC

CircID	chr17:61907408\|61925099
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLFFQPRIHRHIGLHIHISFFHNSGASYCGKNAHQLQKKLPSHLPKDRTAGLSFS
Nucleotide Sequence	ATGCTCTTCTTTCAGCCCCGAATACACAGACACATTGGGCTCCATATCCACATCAGCTTCTTCCACAATTCGGGTGCTTCTTACTGTGGGAAGAATGCCCATCAACTCCAGAAGAAGCTGCCTTCTCATCTGCCAAAGGACAGAACTGCTGGTCTCTCTTTTTCT

CircID	chr17:61907408\|61925099
ORF Type	ORF3
Protein Length	75
Nucleotide Length	225
Protein Sequence	LSPAIPIKAQYRRKSALAFTTCSSFSPEYTDTLGSISTSASSTIRVLLTVGRMPINSRRSCLLICQRTELLVSLF
Nucleotide Sequence	TTGAGTCCAGCGATCCCCATCAAAGCACAGTACAGACGTAAGAGTGCACTGGCTTTCACAACATGCTCTTCTTTCAGCCCCGAATACACAGACACATTGGGCTCCATATCCACATCAGCTTCTTCCACAATTCGGGTGCTTCTTACTGTGGGAAGAATGCCCATCAACTCCAGAAGAAGCTGCCTTCTCATCTGCCAAAGGACAGAACTGCTGGTCTCTCTTTTT

CircID	chr17:61907408\|61925099
ORF Type	ORF4
Protein Length	61
Nucleotide Length	183
Protein Sequence	VHWLSQHALLSAPNTQTHWAPYPHQLLPQFGCFLLWEECPSTPEEAAFSSAKGQNCWSLFF
Nucleotide Sequence	GTGCACTGGCTTTCACAACATGCTCTTCTTTCAGCCCCGAATACACAGACACATTGGGCTCCATATCCACATCAGCTTCTTCCACAATTCGGGTGCTTCTTACTGTGGGAAGAATGCCCATCAACTCCAGAAGAAGCTGCCTTCTCATCTGCCAAAGGACAGAACTGCTGGTCTCTCTTTTTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:61907408\|61925099	ELAVL1	0	4	2
chr17:61907408\|61925099	FAM120A	0	0	1
chr17:61907408\|61925099	PRPF8	1	0	0
chr17:61907408\|61925099	TAF15	0	1	0
chr17:61907408\|61925099	FMR1	0	2	2
chr17:61907408\|61925099	CPSF6	0	0	1
chr17:61907408\|61925099	FUS	1	2	0
chr17:61907408\|61925099	SRSF1	1	2	5
chr17:61907408\|61925099	NOP58	1	1	1
chr17:61907408\|61925099	U2AF1	0	0	3
chr17:61907408\|61925099	U2AF2	4	4	3
chr17:61907408\|61925099	SRSF9	0	0	2
chr17:61907408\|61925099	HNRNPU	0	1	0
chr17:61907408\|61925099	DDX54	2	1	6
chr17:61907408\|61925099	RBM10	1	0	0
chr17:61907408\|61925099	HNRNPM	0	0	2
chr17:61907408\|61925099	TRA2A	0	1	1
chr17:61907408\|61925099	ZNF184	0	1	0
chr17:61907408\|61925099	WTAP	0	1	0
chr17:61907408\|61925099	LARP4B	1	0	0
chr17:61907408\|61925099	SMNDC1	0	1	1
chr17:61907408\|61925099	HNRNPA1	0	2	0
chr17:61907408\|61925099	RANGAP1	0	0	1
chr17:61907408\|61925099	SND1	0	1	1
chr17:61907408\|61925099	IGF2BP2	1	1	1
chr17:61907408\|61925099	TARDBP	0	1	2
chr17:61907408\|61925099	BUD13	0	1	3
chr17:61907408\|61925099	CSTF2T	1	1	1
chr17:61907408\|61925099	TIA1	0	3	0
chr17:61907408\|61925099	RBM22	0	2	0
chr17:61907408\|61925099	TIAL1	0	1	0
chr17:61907408\|61925099	AGO2	1	0	0
chr17:61907408\|61925099	EIF4A3	2	3	3
chr17:61907408\|61925099	FBL	0	1	3

CircRNA Information