CircRNA Information

General Information
circRNA Basic Information
CircID chr17:63432391|63432502
Strand -
CircType exon
Host Gene ENSG00000008283.14;
Algorism CIRI2;
Sequence CCACCACAAATCCGCTTCTGGGGGCCTTCTTCAGCTCCTTAGTCATCCAGTGTTCACTTTGGCAAACAGACCAGTTTACAGACTTTTGTTGCAAATCTAAGGTTCCATTTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:63432391|63432502 hsa-miR-30a-5p 0 0 1
chr17:63432391|63432502 hsa-miR-30a-3p 0 0 1
chr17:63432391|63432502 hsa-miR-30d-5p 0 0 1
chr17:63432391|63432502 hsa-miR-30d-3p 0 0 1
chr17:63432391|63432502 hsa-miR-30b-5p 0 0 1
chr17:63432391|63432502 hsa-miR-30b-3p 0 0 1
chr17:63432391|63432502 hsa-miR-141-5p 0 0 1
chr17:63432391|63432502 hsa-miR-141-3p 0 0 1
chr17:63432391|63432502 hsa-miR-200a-5p 0 0 1
chr17:63432391|63432502 hsa-miR-200a-3p 0 0 1
chr17:63432391|63432502 hsa-miR-30e-5p 0 0 1
chr17:63432391|63432502 hsa-miR-30e-3p 0 0 1
chr17:63432391|63432502 hsa-miR-520g-5p 0 0 1
chr17:63432391|63432502 hsa-miR-520g-3p 0 0 1
chr17:63432391|63432502 hsa-miR-520h 0 0 1
chr17:63432391|63432502 hsa-miR-708-5p 0 0 1
chr17:63432391|63432502 hsa-miR-708-3p 0 0 1
chr17:63432391|63432502 hsa-miR-1243 0 1 1
chr17:63432391|63432502 hsa-miR-1255a 0 0 1
chr17:63432391|63432502 hsa-miR-548g-5p 0 0 1
chr17:63432391|63432502 hsa-miR-548g-3p 0 0 1
chr17:63432391|63432502 hsa-miR-361-3p 0 1 1
chr17:63432391|63432502 hsa-miR-28-5p 0 0 1
chr17:63432391|63432502 hsa-miR-582-3p 0 0 1
chr17:63432391|63432502 hsa-miR-450b-5p 0 0 1
chr17:63432391|63432502 hsa-miR-1255b 0 0 1
chr17:63432391|63432502 hsa-miR-30c 0 0 1
chr17:63432391|63432502 hsa-miR-3138 1 0 0
chr17:63432391|63432502 hsa-miR-3139 0 1 0
chr17:63432391|63432502 hsa-miR-3185 1 1 0
chr17:63432391|63432502 hsa-miR-4513 1 0 0
chr17:63432391|63432502 hsa-miR-4515 1 0 0
chr17:63432391|63432502 hsa-miR-4533 1 0 0
chr17:63432391|63432502 hsa-miR-6126 1 0 0
chr17:63432391|63432502 hsa-miR-6744-5p 1 1 0
chr17:63432391|63432502 hsa-miR-3928-3p 1 0 0
chr17:63432391|63432502 hsa-miR-3180-3p 1 0 0
chr17:63432391|63432502 hsa-miR-5008-5p 1 0 0
chr17:63432391|63432502 hsa-miR-3160-3p 0 1 0
chr17:63432391|63432502 hsa-miR-3065-5p 0 1 0
chr17:63432391|63432502 hsa-miR-6726-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:63432391|63432502
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MGAFFSSLVIQCSLWQTDQFTDFCCKSKVPF
Nucleotide Sequence CTGGGGGCCTTCTTCAGCTCCTTAGTCATCCAGTGTTCACTTTGGCAAACAGACCAGTTTACAGACTTTTGTTGCAAATCTAAGGTTCCATTT

CircID chr17:63432391|63432502
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MQQKSVNWSVCQSEHWMTKELKKAPRSGFVV
Nucleotide Sequence TTGCAACAAAAGTCTGTAAACTGGTCTGTTTGCCAAAGTGAACACTGGATGACTAAGGAGCTGAAGAAGGCCCCCAGAAGCGGATTTGTGGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites