CircRNA Information

General Information
circRNA Basic Information
CircID chr17:63592885|63593043
Strand -
CircType exon
Host Gene ENSG00000136485.13;
Algorism CIRI2;
Sequence AGTTATGCAGACTTTCCCCCTCCTTTTTCTCTTTTCTCTTCCCCTTGCTTTTCCACTGTTTCTTCCTGCTGCCACCTGGGCCTTGAATTCCTGGGCTGTGAAGACATGTAGCAGCTGCAGGGTTTACCACACGTGGGAGGGCAGCCCAGTACTGTCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:63592885|63593043 hsa-miR-27a-5p 0 0 1
chr17:63592885|63593043 hsa-miR-27a-3p 0 0 1
chr17:63592885|63593043 hsa-miR-214-5p 0 0 1
chr17:63592885|63593043 hsa-miR-214-3p 0 0 1
chr17:63592885|63593043 hsa-miR-221-5p 0 0 1
chr17:63592885|63593043 hsa-miR-221-3p 0 0 1
chr17:63592885|63593043 hsa-miR-222-5p 0 0 1
chr17:63592885|63593043 hsa-miR-222-3p 0 0 1
chr17:63592885|63593043 hsa-miR-27b-5p 0 0 1
chr17:63592885|63593043 hsa-miR-27b-3p 0 0 1
chr17:63592885|63593043 hsa-miR-412-5p 0 0 1
chr17:63592885|63593043 hsa-miR-412-3p 0 0 1
chr17:63592885|63593043 hsa-miR-625-5p 0 0 1
chr17:63592885|63593043 hsa-miR-625-3p 0 0 1
chr17:63592885|63593043 hsa-miR-662 0 1 1
chr17:63592885|63593043 hsa-miR-1301-5p 0 0 1
chr17:63592885|63593043 hsa-miR-1301-3p 0 0 1
chr17:63592885|63593043 hsa-miR-1278 0 1 1
chr17:63592885|63593043 hsa-miR-532-3p 0 0 1
chr17:63592885|63593043 hsa-miR-885-3p 1 1 1
chr17:63592885|63593043 hsa-miR-1184 0 1 1
chr17:63592885|63593043 hsa-miR-513a-5p 0 0 1
chr17:63592885|63593043 hsa-miR-101 0 0 1
chr17:63592885|63593043 hsa-miR-761 0 1 0
chr17:63592885|63593043 hsa-miR-765 1 0 0
chr17:63592885|63593043 hsa-miR-665 1 1 0
chr17:63592885|63593043 hsa-miR-1275 1 0 0
chr17:63592885|63593043 hsa-miR-3132 1 0 0
chr17:63592885|63593043 hsa-miR-3153 1 1 0
chr17:63592885|63593043 hsa-miR-3175 1 1 0
chr17:63592885|63593043 hsa-miR-3185 1 0 0
chr17:63592885|63593043 hsa-miR-3197 1 0 0
chr17:63592885|63593043 hsa-miR-4270 1 0 0
chr17:63592885|63593043 hsa-miR-4271 1 1 0
chr17:63592885|63593043 hsa-miR-3960 1 0 0
chr17:63592885|63593043 hsa-miR-4644 1 1 0
chr17:63592885|63593043 hsa-miR-4651 1 0 0
chr17:63592885|63593043 hsa-miR-4688 1 0 0
chr17:63592885|63593043 hsa-miR-4689 1 0 0
chr17:63592885|63593043 hsa-miR-4739 1 0 0
chr17:63592885|63593043 hsa-miR-4779 0 1 0
chr17:63592885|63593043 hsa-miR-5047 0 1 0
chr17:63592885|63593043 hsa-miR-5685 0 1 0
chr17:63592885|63593043 hsa-miR-5703 1 0 0
chr17:63592885|63593043 hsa-miR-5739 1 0 0
chr17:63592885|63593043 hsa-miR-6075 1 1 0
chr17:63592885|63593043 hsa-miR-6088 1 0 0
chr17:63592885|63593043 hsa-miR-6090 1 0 0
chr17:63592885|63593043 hsa-miR-6124 1 1 0
chr17:63592885|63593043 hsa-miR-6165 1 1 0
chr17:63592885|63593043 hsa-miR-8085 1 0 0
chr17:63592885|63593043 hsa-miR-12115 1 0 0
chr17:63592885|63593043 hsa-miR-12118 0 1 0
chr17:63592885|63593043 hsa-miR-6840-3p 0 1 0
chr17:63592885|63593043 hsa-miR-6809-5p 1 0 0
chr17:63592885|63593043 hsa-miR-7106-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6825-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6510-5p 1 1 0
chr17:63592885|63593043 hsa-miR-5187-5p 1 0 0
chr17:63592885|63593043 hsa-miR-7847-3p 1 0 0
chr17:63592885|63593043 hsa-miR-4695-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6730-5p 1 0 0
chr17:63592885|63593043 hsa-miR-24-3p 1 1 0
chr17:63592885|63593043 hsa-miR-197-5p 1 0 0
chr17:63592885|63593043 hsa-miR-7845-5p 0 1 0
chr17:63592885|63593043 hsa-miR-503-5p 1 0 0
chr17:63592885|63593043 hsa-miR-3180-3p 1 0 0
chr17:63592885|63593043 hsa-miR-6798-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6760-5p 1 1 0
chr17:63592885|63593043 hsa-miR-6881-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6782-5p 1 0 0
chr17:63592885|63593043 hsa-miR-5008-5p 1 0 0
chr17:63592885|63593043 hsa-miR-7109-5p 1 0 0
chr17:63592885|63593043 hsa-miR-4640-5p 1 0 0
chr17:63592885|63593043 hsa-miR-3127-5p 1 0 0
chr17:63592885|63593043 hsa-miR-3202 1 1 0
chr17:63592885|63593043 hsa-miR-149-3p 1 0 0
chr17:63592885|63593043 hsa-miR-7160-3p 1 0 0
chr17:63592885|63593043 hsa-miR-3922-5p 0 1 0
chr17:63592885|63593043 hsa-miR-423-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6832-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6856-3p 0 1 0
chr17:63592885|63593043 hsa-miR-3200-3p 0 1 0
chr17:63592885|63593043 hsa-miR-1207-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6787-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6816-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6865-5p 1 1 0
chr17:63592885|63593043 hsa-miR-6870-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6743-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6756-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6815-5p 1 1 0
chr17:63592885|63593043 hsa-miR-11181-3p 1 0 0
chr17:63592885|63593043 hsa-miR-6722-3p 1 0 0
chr17:63592885|63593043 hsa-miR-6779-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6788-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6797-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6879-5p 1 0 0
chr17:63592885|63593043 hsa-miR-7111-5p 1 0 0
chr17:63592885|63593043 hsa-miR-1915-3p 1 0 0
chr17:63592885|63593043 hsa-miR-4728-5p 1 1 0
chr17:63592885|63593043 hsa-miR-5196-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6780b-5p 1 1 0
chr17:63592885|63593043 hsa-miR-6836-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6738-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6794-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6858-5p 1 0 0
chr17:63592885|63593043 hsa-miR-4723-5p 1 1 0
chr17:63592885|63593043 hsa-miR-6739-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6758-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6773-5p 1 0 0
chr17:63592885|63593043 hsa-miR-4747-5p 1 0 0
chr17:63592885|63593043 hsa-miR-6891-5p 1 1 0
chr17:63592885|63593043 hsa-miR-4716-3p 1 1 0
chr17:63592885|63593043 hsa-miR-6750-5p 1 0 0
chr17:63592885|63593043 hsa-miR-3619-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:63592885|63593043
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MQTFPLLFLFSLPLAFPLFLPAATWALNSWAVKTCSSCRVYHTWEGSPVLS
Nucleotide Sequence ATGCAGACTTTCCCCCTCCTTTTTCTCTTTTCTCTTCCCCTTGCTTTTCCACTGTTTCTTCCTGCTGCCACCTGGGCCTTGAATTCCTGGGCTGTGAAGACATGTAGCAGCTGCAGGGTTTACCACACGTGGGAGGGCAGCCCAGTACTGTCC
CircID chr17:63592885|63593043
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MQLLHVFTAQEFKAQVAAGRNSGKARGREKRKRRGKVCIT
Nucleotide Sequence CTGCAGCTGCTACATGTCTTCACAGCCCAGGAATTCAAGGCCCAGGTGGCAGCAGGAAGAAACAGTGGAAAAGCAAGGGGAAGAGAAAAGAGAAAAAGGAGGGGGAAAGTCTGCATAACT
CircID chr17:63592885|63593043
ORF Type ORF3
Protein Length 48
Nucleotide Length 147
Protein Sequence MGCPPTCGKPCSCYMSSQPRNSRPRWQQEETVEKQGEEKREKGGGKSA
Nucleotide Sequence CTGGGCTGCCCTCCCACGTGTGGTAAACCCTGCAGCTGCTACATGTCTTCACAGCCCAGGAATTCAAGGCCCAGGTGGCAGCAGGAAGAAACAGTGGAAAAGCAAGGGGAAGAGAAAAGAGAAAAAGGAGGGGGAAAGTCTGCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab