CircRNA Information

General Information
circRNA Basic Information
CircID chr17:63765912|63766081
Strand -
CircType exon
Host Gene ENSG00000108588.12;
Algorism CIRI2;
Sequence CTGGGTATCTGCATCTTCAAAATCTCCTTCTTGGTTTTCATCCTGCCCTTCCAACTCCACAGTGGTCTCATCTTCATCATCTTCAGTGATTATGACCCGTTGAGGAGATTCAGTAACAGAGTCTTCCATGACATCCTCAAATTCAGCGAAGTCATTATCATCATACTCTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:63765912|63766081 hsa-miR-95-5p 0 0 1
chr17:63765912|63766081 hsa-miR-95-3p 0 0 1
chr17:63765912|63766081 hsa-miR-34b-5p 0 0 1
chr17:63765912|63766081 hsa-miR-34b-3p 0 0 1
chr17:63765912|63766081 hsa-miR-570-5p 0 0 1
chr17:63765912|63766081 hsa-miR-570-3p 0 0 1
chr17:63765912|63766081 hsa-miR-571 0 0 1
chr17:63765912|63766081 hsa-miR-617 0 0 1
chr17:63765912|63766081 hsa-miR-639 0 0 1
chr17:63765912|63766081 hsa-miR-1304-5p 0 0 1
chr17:63765912|63766081 hsa-miR-1304-3p 0 0 1
chr17:63765912|63766081 hsa-miR-1265 0 0 1
chr17:63765912|63766081 hsa-miR-1272 0 1 1
chr17:63765912|63766081 hsa-miR-1322 0 0 1
chr17:63765912|63766081 hsa-miR-769-5p 0 0 1
chr17:63765912|63766081 hsa-miR-1224-5p 0 0 1
chr17:63765912|63766081 hsa-miR-490-5p 0 0 1
chr17:63765912|63766081 hsa-miR-7 0 0 1
chr17:63765912|63766081 hsa-miR-1185 0 0 1
chr17:63765912|63766081 hsa-miR-765 1 0 0
chr17:63765912|63766081 hsa-miR-1270 0 1 0
chr17:63765912|63766081 hsa-miR-3141 1 0 0
chr17:63765912|63766081 hsa-miR-3154 1 1 0
chr17:63765912|63766081 hsa-miR-4428 0 1 0
chr17:63765912|63766081 hsa-miR-4450 0 1 0
chr17:63765912|63766081 hsa-miR-4502 0 1 0
chr17:63765912|63766081 hsa-miR-4507 1 0 0
chr17:63765912|63766081 hsa-miR-4533 1 0 0
chr17:63765912|63766081 hsa-miR-4651 1 0 0
chr17:63765912|63766081 hsa-miR-4688 1 0 0
chr17:63765912|63766081 hsa-miR-5194 1 0 0
chr17:63765912|63766081 hsa-miR-6086 1 0 0
chr17:63765912|63766081 hsa-miR-6088 1 0 0
chr17:63765912|63766081 hsa-miR-8082 0 1 0
chr17:63765912|63766081 hsa-miR-1843 0 1 0
chr17:63765912|63766081 hsa-miR-12115 0 1 0
chr17:63765912|63766081 hsa-miR-7-5p 0 1 0
chr17:63765912|63766081 hsa-miR-6894-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6728-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6833-5p 1 0 0
chr17:63765912|63766081 hsa-miR-7114-5p 1 1 0
chr17:63765912|63766081 hsa-miR-7847-3p 1 0 0
chr17:63765912|63766081 hsa-miR-4653-3p 1 0 0
chr17:63765912|63766081 hsa-miR-6721-5p 1 0 0
chr17:63765912|63766081 hsa-miR-3605-5p 0 1 0
chr17:63765912|63766081 hsa-miR-6796-5p 1 1 0
chr17:63765912|63766081 hsa-miR-6760-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6786-5p 1 0 0
chr17:63765912|63766081 hsa-miR-1226-5p 1 0 0
chr17:63765912|63766081 hsa-miR-1229-5p 1 0 0
chr17:63765912|63766081 hsa-miR-296-3p 1 0 0
chr17:63765912|63766081 hsa-miR-6771-5p 1 0 0
chr17:63765912|63766081 hsa-miR-4743-5p 1 0 0
chr17:63765912|63766081 hsa-miR-7112-5p 1 0 0
chr17:63765912|63766081 hsa-miR-423-5p 1 0 0
chr17:63765912|63766081 hsa-miR-4444 1 0 0
chr17:63765912|63766081 hsa-miR-1207-5p 1 0 0
chr17:63765912|63766081 hsa-miR-4763-3p 1 0 0
chr17:63765912|63766081 hsa-miR-6778-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6743-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6803-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6819-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6851-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6780a-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6797-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6879-5p 1 1 0
chr17:63765912|63766081 hsa-miR-1909-3p 1 0 0
chr17:63765912|63766081 hsa-miR-4632-5p 0 1 0
chr17:63765912|63766081 hsa-miR-6735-5p 0 1 0
chr17:63765912|63766081 hsa-miR-4436b-3p 1 1 0
chr17:63765912|63766081 hsa-miR-3198 1 0 0
chr17:63765912|63766081 hsa-miR-3940-5p 1 0 0
chr17:63765912|63766081 hsa-miR-6855-5p 1 1 0
chr17:63765912|63766081 hsa-miR-6785-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:63765912|63766081
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence LGICIFKISFLVFILPFQLHSGLIFIIFSDYDPLRRFSNRVFHDILKFSEVIIIIL
Nucleotide Sequence CTGGGTATCTGCATCTTCAAAATCTCCTTCTTGGTTTTCATCCTGCCCTTCCAACTCCACAGTGGTCTCATCTTCATCATCTTCAGTGATTATGACCCGTTGAGGAGATTCAGTAACAGAGTCTTCCATGACATCCTCAAATTCAGCGAAGTCATTATCATCATACTC

CircID chr17:63765912|63766081
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MHLQNLLLGFHPALPTPQWSHLHHLQ
Nucleotide Sequence CTGCATCTTCAAAATCTCCTTCTTGGTTTTCATCCTGCCCTTCCAACTCCACAGTGGTCTCATCTTCATCATCTTCAGTGA

CircID chr17:63765912|63766081
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MKMMKMRPLWSWKGRMKTKKEILKMQIP
Nucleotide Sequence CTGAAGATGATGAAGATGAGACCACTGTGGAGTTGGAAGGGCAGGATGAAAACCAAGAAGGAGATTTTGAAGATGCAGATACCC

CircID chr17:63765912|63766081
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MEDSVTESPQRVIITEDDEDETTVELEGQDENQEGDFEDADTQ
Nucleotide Sequence ATGGAAGACTCTGTTACTGAATCTCCTCAACGGGTCATAATCACTGAAGATGATGAAGATGAGACCACTGTGGAGTTGGAAGGGCAGGATGAAAACCAAGAAGGAGATTTTGAAGATGCAGATACCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites