CircRNA Information

General Information
circRNA Basic Information
CircID chr17:63822003|63822146
Strand -
CircType exon
Host Gene ENSG00000108592.15;
Algorism CIRI2;
Sequence CCTGATGTCCCCTGACTCCTGCCAGCTCCTCTGGATCCAGGTCACTATCCAGAGATGTGTCATCACCGTCGTCCTCAACATCTGACACATAGATATCATCCCTTGGCAGATCGGACAGAAATGTGTCTGCTGCACTCATATCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:63822003|63822146 hsa-miR-107 0 0 1
chr17:63822003|63822146 hsa-miR-326 0 0 1
chr17:63822003|63822146 hsa-miR-425-5p 0 0 1
chr17:63822003|63822146 hsa-miR-425-3p 0 0 1
chr17:63822003|63822146 hsa-miR-592 0 1 1
chr17:63822003|63822146 hsa-miR-597-5p 0 0 1
chr17:63822003|63822146 hsa-miR-597-3p 0 0 1
chr17:63822003|63822146 hsa-miR-619-5p 0 0 1
chr17:63822003|63822146 hsa-miR-619-3p 0 0 1
chr17:63822003|63822146 hsa-miR-631 0 1 1
chr17:63822003|63822146 hsa-miR-708-5p 0 0 1
chr17:63822003|63822146 hsa-miR-708-3p 0 0 1
chr17:63822003|63822146 hsa-miR-922 0 0 1
chr17:63822003|63822146 hsa-miR-1224-5p 0 0 1
chr17:63822003|63822146 hsa-miR-525-5p 0 0 1
chr17:63822003|63822146 hsa-miR-28-5p 0 0 1
chr17:63822003|63822146 hsa-miR-1207-5p 1 0 1
chr17:63822003|63822146 hsa-miR-520a-5p 0 0 1
chr17:63822003|63822146 hsa-miR-330-5p 0 0 1
chr17:63822003|63822146 hsa-miR-103 0 0 1
chr17:63822003|63822146 hsa-miR-3661 0 1 0
chr17:63822003|63822146 hsa-miR-4430 1 0 0
chr17:63822003|63822146 hsa-miR-4487 0 1 0
chr17:63822003|63822146 hsa-miR-4490 1 0 0
chr17:63822003|63822146 hsa-miR-4510 1 0 0
chr17:63822003|63822146 hsa-miR-4514 1 0 0
chr17:63822003|63822146 hsa-miR-4527 0 1 0
chr17:63822003|63822146 hsa-miR-4736 1 0 0
chr17:63822003|63822146 hsa-miR-5787 1 0 0
chr17:63822003|63822146 hsa-miR-6127 1 0 0
chr17:63822003|63822146 hsa-miR-6132 1 0 0
chr17:63822003|63822146 hsa-miR-6165 1 0 0
chr17:63822003|63822146 hsa-miR-7150 1 1 0
chr17:63822003|63822146 hsa-miR-8073 1 0 0
chr17:63822003|63822146 hsa-miR-12115 1 0 0
chr17:63822003|63822146 hsa-miR-143-5p 0 1 0
chr17:63822003|63822146 hsa-miR-4433a-3p 0 1 0
chr17:63822003|63822146 hsa-miR-7106-5p 1 0 0
chr17:63822003|63822146 hsa-miR-6894-5p 1 0 0
chr17:63822003|63822146 hsa-miR-4722-5p 1 0 0
chr17:63822003|63822146 hsa-miR-3622b-5p 1 0 0
chr17:63822003|63822146 hsa-miR-885-3p 1 0 0
chr17:63822003|63822146 hsa-miR-877-5p 1 0 0
chr17:63822003|63822146 hsa-miR-4743-3p 0 1 0
chr17:63822003|63822146 hsa-miR-4715-5p 0 1 0
chr17:63822003|63822146 hsa-miR-3944-5p 0 1 0
chr17:63822003|63822146 hsa-miR-514a-5p 0 1 0
chr17:63822003|63822146 hsa-miR-4763-3p 1 0 0
chr17:63822003|63822146 hsa-miR-6812-5p 1 0 0
chr17:63822003|63822146 hsa-miR-6865-5p 1 0 0
chr17:63822003|63822146 hsa-miR-6813-5p 0 1 0
chr17:63822003|63822146 hsa-miR-6722-3p 1 1 0
chr17:63822003|63822146 hsa-miR-4728-5p 1 0 0
chr17:63822003|63822146 hsa-miR-642b-3p 0 1 0
chr17:63822003|63822146 hsa-miR-1909-3p 1 0 0
chr17:63822003|63822146 hsa-miR-4726-5p 1 0 0
chr17:63822003|63822146 hsa-miR-939-5p 1 1 0
chr17:63822003|63822146 hsa-miR-9851-5p 1 1 0
chr17:63822003|63822146 hsa-miR-642a-3p 0 1 0
chr17:63822003|63822146 hsa-miR-5588-5p 1 0 0
chr17:63822003|63822146 hsa-miR-4782-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:63822003|63822146
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MPAPLDPGHYPEMCHHRRPQHLTHRYHPLADRTEMCLLHSYP
Nucleotide Sequence CTGCCAGCTCCTCTGGATCCAGGTCACTATCCAGAGATGTGTCATCACCGTCGTCCTCAACATCTGACACATAGATATCATCCCTTGGCAGATCGGACAGAAATGTGTCTGCTGCACTCATATCCC

CircID chr17:63822003|63822146
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence LMSPDSCQLLWIQVTIQRCVITVVLNI
Nucleotide Sequence CTGATGTCCCCTGACTCCTGCCAGCTCCTCTGGATCCAGGTCACTATCCAGAGATGTGTCATCACCGTCGTCCTCAACATCTGA

CircID chr17:63822003|63822146
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MTPASSSGSRSLSRDVSSPSSSTSDT
Nucleotide Sequence CTGACTCCTGCCAGCTCCTCTGGATCCAGGTCACTATCCAGAGATGTGTCATCACCGTCGTCCTCAACATCTGACACATAG

CircID chr17:63822003|63822146
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MISMCQMLRTTVMTHLWIVTWIQRSWQESGDIR
Nucleotide Sequence ATGATATCTATGTGTCAGATGTTGAGGACGACGGTGATGACACATCTCTGGATAGTGACCTGGATCCAGAGGAGCTGGCAGGAGTCAGGGGACATCAGG

CircID chr17:63822003|63822146
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MSAADTFLSDLPRDDIYVSDVEDDGDDTSLDSDLDPEELAGVRGHQ
Nucleotide Sequence ATGAGTGCAGCAGACACATTTCTGTCCGATCTGCCAAGGGATGATATCTATGTGTCAGATGTTGAGGACGACGGTGATGACACATCTCTGGATAGTGACCTGGATCCAGAGGAGCTGGCAGGAGTCAGGGGACATCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites