CircRNA Information

General Information
circRNA Basic Information
CircID chr17:63831150|63831425
Strand +
CircType exon
Host Gene ENSG00000087191.11;
Algorism CIRI2;
Sequence CTCCTCATTGGGGGGTGGGAATTCAATTTTTCTGTCAATGCGCCCTGGGCGAAGCAGTGCCGAGTCCAGGATATCAATCCTATTAGTAGCCATGATAACCTGAGCAGAGAAAGCAAGTGGGGATCAGCTAAACCTCTTCCTCAGCCTGCGTGGCACCCAGGCCTTCCCTGGGCCCATCCCAAGGATGCTACCACCTTACCTTGATGTTCTTGGTGGCCTCAAAGCCGTCGAGCTGGTTGAGCAACTCCAGCATCGTGCGCTGCACTTCACTGTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:63831150|63831425 hsa-miR-18a-5p 0 0 1
chr17:63831150|63831425 hsa-miR-18a-3p 0 0 1
chr17:63831150|63831425 hsa-miR-154-5p 0 0 1
chr17:63831150|63831425 hsa-miR-154-3p 0 0 1
chr17:63831150|63831425 hsa-miR-422a 0 0 1
chr17:63831150|63831425 hsa-miR-18b-5p 0 0 1
chr17:63831150|63831425 hsa-miR-18b-3p 0 0 1
chr17:63831150|63831425 hsa-miR-573 0 0 1
chr17:63831150|63831425 hsa-miR-661 0 1 1
chr17:63831150|63831425 hsa-miR-1178-5p 0 0 1
chr17:63831150|63831425 hsa-miR-1178-3p 0 0 1
chr17:63831150|63831425 hsa-miR-1227-5p 0 0 1
chr17:63831150|63831425 hsa-miR-1227-3p 0 0 1
chr17:63831150|63831425 hsa-miR-1287-5p 0 0 1
chr17:63831150|63831425 hsa-miR-1287-3p 0 0 1
chr17:63831150|63831425 hsa-miR-1304-5p 0 0 1
chr17:63831150|63831425 hsa-miR-1304-3p 0 0 1
chr17:63831150|63831425 hsa-miR-296-5p 0 0 1
chr17:63831150|63831425 hsa-miR-1224-3p 0 0 1
chr17:63831150|63831425 hsa-miR-767-3p 0 0 1
chr17:63831150|63831425 hsa-miR-188-3p 0 0 1
chr17:63831150|63831425 hsa-miR-769-3p 0 0 1
chr17:63831150|63831425 hsa-miR-362-5p 0 1 1
chr17:63831150|63831425 hsa-miR-450b-3p 0 0 1
chr17:63831150|63831425 hsa-miR-519b-3p 0 0 1
chr17:63831150|63831425 hsa-miR-519c-3p 0 0 1
chr17:63831150|63831425 hsa-miR-1260 0 0 1
chr17:63831150|63831425 hsa-miR-1280 0 0 1
chr17:63831150|63831425 hsa-miR-378 0 0 1
chr17:63831150|63831425 hsa-miR-519a 0 0 1
chr17:63831150|63831425 hsa-miR-762 1 0 0
chr17:63831150|63831425 hsa-miR-1294 0 1 0
chr17:63831150|63831425 hsa-miR-1469 1 0 0
chr17:63831150|63831425 hsa-miR-378b 0 1 0
chr17:63831150|63831425 hsa-miR-3197 1 0 0
chr17:63831150|63831425 hsa-miR-378c 0 1 0
chr17:63831150|63831425 hsa-miR-4254 0 1 0
chr17:63831150|63831425 hsa-miR-4267 0 1 0
chr17:63831150|63831425 hsa-miR-3916 1 1 0
chr17:63831150|63831425 hsa-miR-378e 0 1 0
chr17:63831150|63831425 hsa-miR-378f 0 1 0
chr17:63831150|63831425 hsa-miR-4452 0 1 0
chr17:63831150|63831425 hsa-miR-378h 0 1 0
chr17:63831150|63831425 hsa-miR-4478 0 1 0
chr17:63831150|63831425 hsa-miR-4507 1 0 0
chr17:63831150|63831425 hsa-miR-4651 1 0 0
chr17:63831150|63831425 hsa-miR-4656 1 0 0
chr17:63831150|63831425 hsa-miR-6745 1 0 0
chr17:63831150|63831425 hsa-miR-9899 1 0 0
chr17:63831150|63831425 hsa-miR-12121 0 1 0
chr17:63831150|63831425 hsa-miR-12127 0 1 0
chr17:63831150|63831425 hsa-miR-138-5p 1 0 0
chr17:63831150|63831425 hsa-miR-504-3p 1 1 0
chr17:63831150|63831425 hsa-miR-6765-5p 1 0 0
chr17:63831150|63831425 hsa-miR-125a-3p 1 0 0
chr17:63831150|63831425 hsa-miR-6728-5p 0 1 0
chr17:63831150|63831425 hsa-miR-6089 1 0 0
chr17:63831150|63831425 hsa-miR-6757-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6880-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6741-5p 0 1 0
chr17:63831150|63831425 hsa-miR-6776-5p 0 1 0
chr17:63831150|63831425 hsa-miR-6782-5p 1 0 0
chr17:63831150|63831425 hsa-miR-5008-5p 1 0 0
chr17:63831150|63831425 hsa-miR-3934-3p 1 1 0
chr17:63831150|63831425 hsa-miR-1343-3p 0 1 0
chr17:63831150|63831425 hsa-miR-5088-5p 1 0 0
chr17:63831150|63831425 hsa-miR-1226-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6749-5p 1 0 0
chr17:63831150|63831425 hsa-miR-3690 0 1 0
chr17:63831150|63831425 hsa-miR-1184 1 0 0
chr17:63831150|63831425 hsa-miR-3160-5p 0 1 0
chr17:63831150|63831425 hsa-miR-7113-5p 0 1 0
chr17:63831150|63831425 hsa-miR-4433a-5p 0 1 0
chr17:63831150|63831425 hsa-miR-6787-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6812-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6756-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6803-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6851-5p 1 0 0
chr17:63831150|63831425 hsa-miR-7107-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6779-5p 1 0 0
chr17:63831150|63831425 hsa-miR-1915-3p 1 1 0
chr17:63831150|63831425 hsa-miR-3620-5p 1 0 0
chr17:63831150|63831425 hsa-miR-5196-5p 1 0 0
chr17:63831150|63831425 hsa-miR-6780b-5p 1 1 0
chr17:63831150|63831425 hsa-miR-449c-5p 1 0 0
chr17:63831150|63831425 hsa-miR-4725-3p 0 1 0
chr17:63831150|63831425 hsa-miR-6511b-5p 1 0 0
chr17:63831150|63831425 hsa-miR-3085-5p 1 1 0
chr17:63831150|63831425 hsa-miR-6799-3p 1 0 0
chr17:63831150|63831425 hsa-miR-6773-5p 0 1 0
chr17:63831150|63831425 hsa-miR-378a-3p 0 1 0
chr17:63831150|63831425 hsa-miR-6724-5p 1 1 0
chr17:63831150|63831425 hsa-miR-6791-5p 0 1 0
chr17:63831150|63831425 hsa-miR-6805-3p 1 0 0
chr17:63831150|63831425 hsa-miR-6837-5p 0 1 0
chr17:63831150|63831425 hsa-miR-6764-5p 0 1 0
chr17:63831150|63831425 hsa-miR-378d 0 1 0
chr17:63831150|63831425 hsa-miR-101-2-5p 0 1 0
chr17:63831150|63831425 hsa-miR-3616-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:63831150|63831425
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MSRESKWGSAKPLPQPAWHPGLPWAHPKDATTLP
Nucleotide Sequence CTGAGCAGAGAAAGCAAGTGGGGATCAGCTAAACCTCTTCCTCAGCCTGCGTGGCACCCAGGCCTTCCCTGGGCCCATCCCAAGGATGCTACCACCTTACCTTGA
CircID chr17:63831150|63831425
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGGGNSIFLSMRPGRSSAESRISILLVAMIT
Nucleotide Sequence TTGGGGGGTGGGAATTCAATTTTTCTGTCAATGCGCCCTGGGCGAAGCAGTGCCGAGTCCAGGATATCAATCCTATTAGTAGCCATGATAACCTGA
CircID chr17:63831150|63831425
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MRGTQAFPGPIPRMLPPYLDVLGGLKAVELVEQLQHRALHFTV
Nucleotide Sequence CTGCGTGGCACCCAGGCCTTCCCTGGGCCCATCCCAAGGATGCTACCACCTTACCTTGATGTTCTTGGTGGCCTCAAAGCCGTCGAGCTGGTTGAGCAACTCCAGCATCGTGCGCTGCACTTCACTGTC
CircID chr17:63831150|63831425
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MGPSQGCYHLTLMFLVASKPSSWLSNSSIVRCTSLS
Nucleotide Sequence CTGGGCCCATCCCAAGGATGCTACCACCTTACCTTGATGTTCTTGGTGGCCTCAAAGCCGTCGAGCTGGTTGAGCAACTCCAGCATCGTGCGCTGCACTTCACTGTCC
CircID chr17:63831150|63831425
ORF Type ORF5
Protein Length 31
Nucleotide Length 93
Protein Sequence MATNRIDILDSALLRPGRIDRKIEFPPPNEE
Nucleotide Sequence ATGGCTACTAATAGGATTGATATCCTGGACTCGGCACTGCTTCGCCCAGGGCGCATTGACAGAAAAATTGAATTCCCACCCCCCAATGAGGAG
CircID chr17:63831150|63831425
ORF Type ORF6
Protein Length 38
Nucleotide Length 114
Protein Sequence MLSLLRLSWLLIGLISWTRHCFAQGALTEKLNSHPPMR
Nucleotide Sequence TTGCTTTCTCTGCTCAGGTTATCATGGCTACTAATAGGATTGATATCCTGGACTCGGCACTGCTTCGCCCAGGGCGCATTGACAGAAAAATTGAATTCCCACCCCCCAATGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab