CircRNA Information

General Information
circRNA Basic Information
CircID chr17:67031681|67031866
Strand +
CircType exon
Host Gene ENSG00000075461.5;
Algorism CIRI2;
Sequence GCTCAGGGGACAGAGTTGCTCCTTGGGTCTATGACAAGGGGCACGGCAAGAGGTCACGTGGCCGCCATTCCCCTGACCGATGGAACCCTCCAGACTCTGAAGTCCAGTCAGTGGGTCTGTCCTGCCCATTCTGAGTGAGGCAGAAACTTCCAGAAGCAAAGAGGATAGCCAGCAACAGCCCCCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:67031681|67031866 hsa-miR-422a 1 1 1
chr17:67031681|67031866 hsa-miR-376b-5p 0 0 1
chr17:67031681|67031866 hsa-miR-376b-3p 0 0 1
chr17:67031681|67031866 hsa-miR-637 1 1 1
chr17:67031681|67031866 hsa-miR-1286 0 0 1
chr17:67031681|67031866 hsa-miR-1299 0 1 1
chr17:67031681|67031866 hsa-miR-331-3p 0 0 1
chr17:67031681|67031866 hsa-miR-875-3p 0 0 1
chr17:67031681|67031866 hsa-miR-125a-5p 0 0 1
chr17:67031681|67031866 hsa-miR-125b 0 0 1
chr17:67031681|67031866 hsa-miR-378 0 0 1
chr17:67031681|67031866 hsa-miR-516b 0 0 1
chr17:67031681|67031866 hsa-miR-544 0 0 1
chr17:67031681|67031866 hsa-miR-376a 0 0 1
chr17:67031681|67031866 hsa-miR-638 1 0 0
chr17:67031681|67031866 hsa-miR-762 1 0 0
chr17:67031681|67031866 hsa-miR-1275 1 0 0
chr17:67031681|67031866 hsa-miR-711 0 1 0
chr17:67031681|67031866 hsa-miR-378b 0 1 0
chr17:67031681|67031866 hsa-miR-3196 1 0 0
chr17:67031681|67031866 hsa-miR-378c 1 1 0
chr17:67031681|67031866 hsa-miR-378e 1 1 0
chr17:67031681|67031866 hsa-miR-378f 0 1 0
chr17:67031681|67031866 hsa-miR-4436a 0 1 0
chr17:67031681|67031866 hsa-miR-4447 1 1 0
chr17:67031681|67031866 hsa-miR-378h 0 1 0
chr17:67031681|67031866 hsa-miR-4488 1 0 0
chr17:67031681|67031866 hsa-miR-4525 1 0 0
chr17:67031681|67031866 hsa-miR-378i 0 1 0
chr17:67031681|67031866 hsa-miR-4656 1 0 0
chr17:67031681|67031866 hsa-miR-4675 0 1 0
chr17:67031681|67031866 hsa-miR-4734 1 0 0
chr17:67031681|67031866 hsa-miR-4741 1 0 0
chr17:67031681|67031866 hsa-miR-8058 0 1 0
chr17:67031681|67031866 hsa-miR-154-5p 1 0 0
chr17:67031681|67031866 hsa-miR-128-1-5p 1 0 0
chr17:67031681|67031866 hsa-miR-4731-5p 0 1 0
chr17:67031681|67031866 hsa-miR-4665-3p 1 0 0
chr17:67031681|67031866 hsa-miR-149-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6721-5p 0 1 0
chr17:67031681|67031866 hsa-miR-181a-2-3p 0 1 0
chr17:67031681|67031866 hsa-miR-6716-5p 0 1 0
chr17:67031681|67031866 hsa-miR-185-3p 1 1 0
chr17:67031681|67031866 hsa-miR-23a-5p 0 1 0
chr17:67031681|67031866 hsa-miR-6835-5p 1 0 0
chr17:67031681|67031866 hsa-miR-5001-3p 0 1 0
chr17:67031681|67031866 hsa-miR-5580-5p 0 1 0
chr17:67031681|67031866 hsa-miR-6814-5p 0 1 0
chr17:67031681|67031866 hsa-miR-6738-3p 0 1 0
chr17:67031681|67031866 hsa-miR-6770-3p 1 1 0
chr17:67031681|67031866 hsa-miR-5007-5p 0 1 0
chr17:67031681|67031866 hsa-miR-3664-5p 0 1 0
chr17:67031681|67031866 hsa-miR-10400-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6816-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6803-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6813-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6751-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6846-5p 1 0 0
chr17:67031681|67031866 hsa-miR-6848-5p 1 1 0
chr17:67031681|67031866 hsa-miR-378a-3p 1 1 0
chr17:67031681|67031866 hsa-miR-5009-5p 0 1 0
chr17:67031681|67031866 hsa-miR-378d 0 1 0
chr17:67031681|67031866 hsa-miR-6820-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:67031681|67031866
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MLLGSMTRGTARGHVAAIPLTDGTLQTLKSSQWVCPAHSE
Nucleotide Sequence TTGCTCCTTGGGTCTATGACAAGGGGCACGGCAAGAGGTCACGTGGCCGCCATTCCCCTGACCGATGGAACCCTCCAGACTCTGAAGTCCAGTCAGTGGGTCTGTCCTGCCCATTCTGAGTGA

CircID chr17:67031681|67031866
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MLLEVSASLRMGRTDPLTGLQSLEGSIGQGNGGHVTSCRAPCHRPKEQLCPLS
Nucleotide Sequence TTGCTTCTGGAAGTTTCTGCCTCACTCAGAATGGGCAGGACAGACCCACTGACTGGACTTCAGAGTCTGGAGGGTTCCATCGGTCAGGGGAATGGCGGCCACGTGACCTCTTGCCGTGCCCCTTGTCATAGACCCAAGGAGCAACTCTGTCCCCTGAGC

CircID chr17:67031681|67031866
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence LGAVAGYPLCFWKFLPHSEWAGQTH
Nucleotide Sequence CTGGGGGCTGTTGCTGGCTATCCTCTTTGCTTCTGGAAGTTTCTGCCTCACTCAGAATGGGCAGGACAGACCCACTGA

CircID chr17:67031681|67031866
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MLLAILFASGSFCLTQNGQDRPTDWTSESGGFHRSGEWRPRDLLPCPLS
Nucleotide Sequence CTGTTGCTGGCTATCCTCTTTGCTTCTGGAAGTTTCTGCCTCACTCAGAATGGGCAGGACAGACCCACTGACTGGACTTCAGAGTCTGGAGGGTTCCATCGGTCAGGGGAATGGCGGCCACGTGACCTCTTGCCGTGCCCCTTGTCATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites