CircRNA Information

General Information
circRNA Basic Information
CircID chr17:67032144|67032324
Strand -
CircType exon
Host Gene ENSG00000075461.5;
Algorism CIRI2;
Sequence AGGACGGAGTGGAGTGAGTTTGGATAAACGGACCGAGCTGGGCTTCTCTTCCTCCCTACAGAGGGGAGATCTCAGCACTTTGTCCGGAGCTGAGGAAGTGGTTTCTGTGTTTTACAGTTTTTCCAGCCATTCTTTTCTTCCCCCTCCTGAAGCAAGCAAAGAGCGTGGAGGCGTGTGCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:67032144|67032324 hsa-miR-17-5p 0 0 1
chr17:67032144|67032324 hsa-miR-17-3p 0 0 1
chr17:67032144|67032324 hsa-miR-20a-5p 0 0 1
chr17:67032144|67032324 hsa-miR-20a-3p 0 0 1
chr17:67032144|67032324 hsa-miR-93-5p 0 0 1
chr17:67032144|67032324 hsa-miR-93-3p 0 0 1
chr17:67032144|67032324 hsa-miR-106a-5p 0 0 1
chr17:67032144|67032324 hsa-miR-106a-3p 0 0 1
chr17:67032144|67032324 hsa-miR-186-5p 0 0 1
chr17:67032144|67032324 hsa-miR-186-3p 0 0 1
chr17:67032144|67032324 hsa-miR-106b-5p 0 0 1
chr17:67032144|67032324 hsa-miR-106b-3p 0 0 1
chr17:67032144|67032324 hsa-miR-302a-5p 0 0 1
chr17:67032144|67032324 hsa-miR-302a-3p 0 0 1
chr17:67032144|67032324 hsa-miR-302b-5p 0 0 1
chr17:67032144|67032324 hsa-miR-302b-3p 0 0 1
chr17:67032144|67032324 hsa-miR-302c-5p 0 0 1
chr17:67032144|67032324 hsa-miR-302c-3p 0 0 1
chr17:67032144|67032324 hsa-miR-302d-5p 0 0 1
chr17:67032144|67032324 hsa-miR-302d-3p 0 0 1
chr17:67032144|67032324 hsa-miR-372-5p 0 0 1
chr17:67032144|67032324 hsa-miR-372-3p 0 0 1
chr17:67032144|67032324 hsa-miR-373-5p 0 0 1
chr17:67032144|67032324 hsa-miR-373-3p 0 0 1
chr17:67032144|67032324 hsa-miR-20b-5p 0 0 1
chr17:67032144|67032324 hsa-miR-20b-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520e-5p 0 0 1
chr17:67032144|67032324 hsa-miR-520e-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520b-5p 0 0 1
chr17:67032144|67032324 hsa-miR-520b-3p 0 0 1
chr17:67032144|67032324 hsa-miR-519d-5p 0 0 1
chr17:67032144|67032324 hsa-miR-519d-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520g-5p 0 0 1
chr17:67032144|67032324 hsa-miR-520g-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520h 0 1 1
chr17:67032144|67032324 hsa-miR-625-5p 0 0 1
chr17:67032144|67032324 hsa-miR-625-3p 0 0 1
chr17:67032144|67032324 hsa-miR-548e-5p 0 0 1
chr17:67032144|67032324 hsa-miR-548e-3p 0 0 1
chr17:67032144|67032324 hsa-miR-548g-5p 0 0 1
chr17:67032144|67032324 hsa-miR-548g-3p 0 0 1
chr17:67032144|67032324 hsa-miR-302e 0 0 1
chr17:67032144|67032324 hsa-miR-1281 0 1 1
chr17:67032144|67032324 hsa-miR-1321 0 0 1
chr17:67032144|67032324 hsa-miR-512-3p 0 0 1
chr17:67032144|67032324 hsa-miR-423-3p 0 1 1
chr17:67032144|67032324 hsa-miR-875-3p 0 0 1
chr17:67032144|67032324 hsa-miR-483-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520d-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520a-3p 0 0 1
chr17:67032144|67032324 hsa-miR-520c-3p 0 0 1
chr17:67032144|67032324 hsa-miR-548a-3p 0 0 1
chr17:67032144|67032324 hsa-miR-548f 0 0 1
chr17:67032144|67032324 hsa-miR-4267 0 1 0
chr17:67032144|67032324 hsa-miR-4271 0 1 0
chr17:67032144|67032324 hsa-miR-3916 0 1 0
chr17:67032144|67032324 hsa-miR-4706 1 0 0
chr17:67032144|67032324 hsa-miR-4739 1 1 0
chr17:67032144|67032324 hsa-miR-4779 0 1 0
chr17:67032144|67032324 hsa-miR-6077 0 1 0
chr17:67032144|67032324 hsa-miR-7106-5p 0 1 0
chr17:67032144|67032324 hsa-miR-6842-3p 1 0 0
chr17:67032144|67032324 hsa-miR-6716-3p 1 1 0
chr17:67032144|67032324 hsa-miR-6835-5p 1 0 0
chr17:67032144|67032324 hsa-miR-4786-3p 1 0 0
chr17:67032144|67032324 hsa-miR-3162-5p 0 1 0
chr17:67032144|67032324 hsa-miR-3180-5p 1 0 0
chr17:67032144|67032324 hsa-miR-1468-5p 0 1 0
chr17:67032144|67032324 hsa-miR-6758-3p 0 1 0
chr17:67032144|67032324 hsa-miR-1255b-2-3p 0 1 0
chr17:67032144|67032324 hsa-miR-6750-3p 0 1 0
chr17:67032144|67032324 hsa-miR-5001-5p 1 0 0
chr17:67032144|67032324 hsa-miR-7111-5p 1 1 0
chr17:67032144|67032324 hsa-miR-4728-5p 0 1 0
chr17:67032144|67032324 hsa-miR-5196-5p 0 1 0
chr17:67032144|67032324 hsa-miR-6780b-5p 0 1 0
chr17:67032144|67032324 hsa-miR-4725-3p 0 1 0
chr17:67032144|67032324 hsa-miR-6795-5p 1 1 0
chr17:67032144|67032324 hsa-miR-4716-3p 0 1 0
chr17:67032144|67032324 hsa-miR-135a-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:67032144|67032324
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MDKRTELGFSSSLQRGDLSTLSGAEEVVSVFYSFSSHSFLPPPEASKERGGVCR
Nucleotide Sequence TTGGATAAACGGACCGAGCTGGGCTTCTCTTCCTCCCTACAGAGGGGAGATCTCAGCACTTTGTCCGGAGCTGAGGAAGTGGTTTCTGTGTTTTACAGTTTTTCCAGCCATTCTTTTCTTCCCCCTCCTGAAGCAAGCAAAGAGCGTGGAGGCGTGTGCAGG

CircID chr17:67032144|67032324
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MRKWFLCFTVFPAILFFPLLKQAKSVEACA
Nucleotide Sequence CTGAGGAAGTGGTTTCTGTGTTTTACAGTTTTTCCAGCCATTCTTTTCTTCCCCCTCCTGAAGCAAGCAAAGAGCGTGGAGGCGTGTGCA

CircID chr17:67032144|67032324
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MRSPLCREEEKPSSVRLSKLTPLRP
Nucleotide Sequence CTGAGATCTCCCCTCTGTAGGGAGGAAGAGAAGCCCAGCTCGGTCCGTTTATCCAAACTCACTCCACTCCGTCCT

CircID chr17:67032144|67032324
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MLQEGEEKNGWKNCKTQKPLPQLRTKC
Nucleotide Sequence TTGCTTCAGGAGGGGGAAGAAAAGAATGGCTGGAAAAACTGTAAAACACAGAAACCACTTCCTCAGCTCCGGACAAAGTGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites