CircRNA Information

General Information
circRNA Basic Information
CircID chr17:67032958|67033061
Strand -
CircType exon
Host Gene ENSG00000075461.5;
Algorism CIRI2;
Sequence CTCCCCTCCCGCTGCCCCAGAAGTTTCTATCATTCCATGGAGAAAGCTGTGTTCCAATGAATCCTACCTCTTGCCCAGTCCCAGGCAGAGTAAGCAGGGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:67032958|67033061 hsa-let-7b-5p 0 0 1
chr17:67032958|67033061 hsa-let-7b-3p 0 0 1
chr17:67032958|67033061 hsa-let-7c-5p 0 0 1
chr17:67032958|67033061 hsa-let-7c-3p 0 0 1
chr17:67032958|67033061 hsa-let-7d-5p 0 0 1
chr17:67032958|67033061 hsa-let-7d-3p 0 0 1
chr17:67032958|67033061 hsa-let-7e-5p 0 0 1
chr17:67032958|67033061 hsa-let-7e-3p 0 0 1
chr17:67032958|67033061 hsa-miR-31-5p 0 0 1
chr17:67032958|67033061 hsa-miR-31-3p 0 0 1
chr17:67032958|67033061 hsa-miR-98-5p 0 0 1
chr17:67032958|67033061 hsa-miR-98-3p 0 0 1
chr17:67032958|67033061 hsa-let-7g-5p 0 0 1
chr17:67032958|67033061 hsa-let-7g-3p 0 0 1
chr17:67032958|67033061 hsa-let-7i-5p 0 0 1
chr17:67032958|67033061 hsa-let-7i-3p 0 0 1
chr17:67032958|67033061 hsa-miR-136-5p 0 0 1
chr17:67032958|67033061 hsa-miR-136-3p 0 0 1
chr17:67032958|67033061 hsa-miR-206 0 0 1
chr17:67032958|67033061 hsa-miR-612 0 1 1
chr17:67032958|67033061 hsa-miR-613 0 0 1
chr17:67032958|67033061 hsa-miR-637 0 0 1
chr17:67032958|67033061 hsa-miR-661 0 1 1
chr17:67032958|67033061 hsa-miR-1291 0 0 1
chr17:67032958|67033061 hsa-miR-296-5p 0 0 1
chr17:67032958|67033061 hsa-miR-486-3p 0 0 1
chr17:67032958|67033061 hsa-miR-885-3p 0 1 1
chr17:67032958|67033061 hsa-miR-515-5p 0 0 1
chr17:67032958|67033061 hsa-miR-664 0 0 1
chr17:67032958|67033061 hsa-let-7a 0 0 1
chr17:67032958|67033061 hsa-let-7f 0 0 1
chr17:67032958|67033061 hsa-miR-1285 0 0 1
chr17:67032958|67033061 hsa-miR-1 0 0 1
chr17:67032958|67033061 hsa-miR-1254 0 0 1
chr17:67032958|67033061 hsa-miR-4298 1 0 0
chr17:67032958|67033061 hsa-miR-4492 1 0 0
chr17:67032958|67033061 hsa-miR-4505 1 0 0
chr17:67032958|67033061 hsa-miR-4508 1 0 0
chr17:67032958|67033061 hsa-miR-1587 1 0 0
chr17:67032958|67033061 hsa-miR-4651 1 0 0
chr17:67032958|67033061 hsa-miR-5787 1 0 0
chr17:67032958|67033061 hsa-miR-6085 1 0 0
chr17:67032958|67033061 hsa-miR-6860 1 1 0
chr17:67032958|67033061 hsa-miR-8052 1 1 0
chr17:67032958|67033061 hsa-miR-6861-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6728-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6721-5p 1 0 0
chr17:67032958|67033061 hsa-miR-185-3p 1 0 0
chr17:67032958|67033061 hsa-miR-5006-5p 1 0 0
chr17:67032958|67033061 hsa-miR-1229-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6781-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6853-3p 0 1 0
chr17:67032958|67033061 hsa-miR-3173-5p 0 1 0
chr17:67032958|67033061 hsa-miR-550b-3p 0 1 0
chr17:67032958|67033061 hsa-miR-6816-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6775-5p 0 1 0
chr17:67032958|67033061 hsa-miR-7107-5p 1 0 0
chr17:67032958|67033061 hsa-miR-10401-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6774-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6879-5p 1 0 0
chr17:67032958|67033061 hsa-miR-3620-5p 1 0 0
chr17:67032958|67033061 hsa-miR-4728-5p 0 1 0
chr17:67032958|67033061 hsa-miR-5189-5p 1 1 0
chr17:67032958|67033061 hsa-miR-4649-5p 1 1 0
chr17:67032958|67033061 hsa-miR-4726-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6846-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6848-5p 1 0 0
chr17:67032958|67033061 hsa-miR-3187-5p 0 1 0
chr17:67032958|67033061 hsa-miR-3199 0 1 0
chr17:67032958|67033061 hsa-miR-365a-5p 1 0 0
chr17:67032958|67033061 hsa-miR-365b-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6799-3p 0 1 0
chr17:67032958|67033061 hsa-miR-6724-5p 1 0 0
chr17:67032958|67033061 hsa-miR-6791-5p 0 1 0
chr17:67032958|67033061 hsa-miR-6775-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:67032958|67033061
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MPQKFLSFHGESCVPMNPTSCPVPGRVSRAH
Nucleotide Sequence CTGCCCCAGAAGTTTCTATCATTCCATGGAGAAAGCTGTGTTCCAATGAATCCTACCTCTTGCCCAGTCCCAGGCAGAGTAAGCAGGGCCCAC
CircID chr17:67032958|67033061
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MLTLPGTGQEVGFIGTQLSPWNDRNFWGSGRG
Nucleotide Sequence CTGCTTACTCTGCCTGGGACTGGGCAAGAGGTAGGATTCATTGGAACACAGCTTTCTCCATGGAATGATAGAAACTTCTGGGGCAGCGGGAGGGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab