CircNet

General Information

circRNA Basic Information

CircID	chr17:67922840\|67924589
Strand	+
CircType	exon
Host Gene	ENSG00000171634.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAACGCCTACACCTCAGAGGAAAGGCCTTCGATCAAGTGCACTGCGGCCAAAGAGACCAGAAACGCCCAAGCAAACTGGCCCTGTTATTATTGAAACCTGGGTAGCAGAAGAAGAACTGGAATTGTGGGAGATCAGGGCATTTGCTGAGAGAGTGGAGAAAGAAAAGGCACAAGCAGTTGAGCAACAGGCTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:67922840\|67924589	hsa-miR-506-5p	0	0	1
chr17:67922840\|67924589	hsa-miR-506-3p	0	0	1
chr17:67922840\|67924589	hsa-miR-105-5p	0	1	1
chr17:67922840\|67924589	hsa-miR-145-5p	0	1	1
chr17:67922840\|67924589	hsa-miR-124	0	0	1
chr17:67922840\|67924589	hsa-miR-936	1	0	0
chr17:67922840\|67924589	hsa-miR-4644	1	1	0
chr17:67922840\|67924589	hsa-miR-4692	1	1	0
chr17:67922840\|67924589	hsa-miR-5739	1	0	0
chr17:67922840\|67924589	hsa-miR-6081	1	0	0
chr17:67922840\|67924589	hsa-miR-8085	1	0	0
chr17:67922840\|67924589	hsa-miR-12115	1	1	0
chr17:67922840\|67924589	hsa-miR-17-3p	1	0	0
chr17:67922840\|67924589	hsa-miR-6894-5p	1	0	0
chr17:67922840\|67924589	hsa-miR-3622a-5p	1	0	0
chr17:67922840\|67924589	hsa-miR-6880-5p	1	1	0
chr17:67922840\|67924589	hsa-miR-7847-3p	1	1	0
chr17:67922840\|67924589	hsa-miR-6770-5p	1	0	0
chr17:67922840\|67924589	hsa-miR-2467-3p	1	0	0
chr17:67922840\|67924589	hsa-miR-877-5p	1	0	0
chr17:67922840\|67924589	hsa-miR-124-3p	0	1	0
chr17:67922840\|67924589	hsa-miR-1910-3p	1	0	0
chr17:67922840\|67924589	hsa-miR-6511a-5p	1	0	0
chr17:67922840\|67924589	hsa-miR-6739-5p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:67922840\|67924589
ORF Type	ORF1
Protein Length	51
Nucleotide Length	153
Protein Sequence	LLNCLCLFFLHSLSKCPDLPQFQFFFCYPGFNNNRASLLGRFWSLWPQCT*
Nucleotide Sequence	TTGCTCAACTGCTTGTGCCTTTTCTTTCTCCACTCTCTCAGCAAATGCCCTGATCTCCCACAATTCCAGTTCTTCTTCTGCTACCCAGGTTTCAATAATAACAGGGCCAGTTTGCTTGGGCGTTTCTGGTCTCTTTGGCCGCAGTGCACTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:67922840\|67924589	NOP56	1	2	0
chr17:67922840\|67924589	MOV10	0	0	1
chr17:67922840\|67924589	ELAVL1	3	2	1
chr17:67922840\|67924589	FAM120A	0	0	1
chr17:67922840\|67924589	PRPF8	0	1	1
chr17:67922840\|67924589	UPF1	0	1	0
chr17:67922840\|67924589	TAF15	1	0	0
chr17:67922840\|67924589	FMR1	0	0	3
chr17:67922840\|67924589	FUS	1	0	0
chr17:67922840\|67924589	GNL3	0	0	1
chr17:67922840\|67924589	DGCR8	0	1	0
chr17:67922840\|67924589	SRSF7	0	0	1
chr17:67922840\|67924589	SRSF1	0	0	2
chr17:67922840\|67924589	NOP58	3	1	3
chr17:67922840\|67924589	NONO	1	0	0
chr17:67922840\|67924589	U2AF2	3	0	0
chr17:67922840\|67924589	SRSF9	0	0	1
chr17:67922840\|67924589	DDX54	3	0	5
chr17:67922840\|67924589	RBM10	2	0	0
chr17:67922840\|67924589	FIP1L1	0	1	0
chr17:67922840\|67924589	PTBP1	1	1	0
chr17:67922840\|67924589	HNRNPC	3	3	0
chr17:67922840\|67924589	TRA2A	0	0	7
chr17:67922840\|67924589	ZNF184	0	0	1
chr17:67922840\|67924589	SMNDC1	1	0	0
chr17:67922840\|67924589	MSI2	0	0	1
chr17:67922840\|67924589	LIN28B	0	0	2
chr17:67922840\|67924589	LIN28A	0	0	1
chr17:67922840\|67924589	SND1	0	0	2
chr17:67922840\|67924589	IGF2BP1	0	0	1
chr17:67922840\|67924589	IGF2BP3	0	0	1
chr17:67922840\|67924589	IGF2BP2	0	2	3
chr17:67922840\|67924589	TARDBP	1	0	1
chr17:67922840\|67924589	BUD13	0	1	5
chr17:67922840\|67924589	CNBP	0	1	0
chr17:67922840\|67924589	SLTM	0	0	1
chr17:67922840\|67924589	CSTF2T	1	0	1
chr17:67922840\|67924589	EIF4A3	2	1	2
chr17:67922840\|67924589	FBL	0	0	2

CircRNA Information