CircRNA Information

General Information
circRNA Basic Information
CircID chr17:68551873|68555743
Strand -
CircType exon
Host Gene ENSG00000108950.10;
Algorism CIRI2;
Sequence CTCATGGGTTTGAACATGGCCTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTCACAATCTGGGTGCAGTCACATGCCCCCAGCAAGGCTTTCTCATCTTGACTGTAATCAGCACTGATGGTGGGAAAGTGCCTCATGTCTTGCAGAAGTTTGCTGACAACAGGGCTGGACCGGGAGTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGTCGGAGCTGCAGTGGGGGGTCCAGGGAGGTAAGGTTCATCTGCTCTCTGTACATCTTGTGTCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:68551873|68555743 hsa-miR-148a-5p 0 0 1
chr17:68551873|68555743 hsa-miR-148a-3p 0 0 1
chr17:68551873|68555743 hsa-miR-152-5p 0 0 1
chr17:68551873|68555743 hsa-miR-152-3p 0 0 1
chr17:68551873|68555743 hsa-miR-134-5p 0 0 1
chr17:68551873|68555743 hsa-miR-134-3p 0 0 1
chr17:68551873|68555743 hsa-miR-148b-5p 0 0 1
chr17:68551873|68555743 hsa-miR-148b-3p 0 0 1
chr17:68551873|68555743 hsa-miR-539-5p 0 0 1
chr17:68551873|68555743 hsa-miR-539-3p 0 0 1
chr17:68551873|68555743 hsa-miR-545-5p 0 0 1
chr17:68551873|68555743 hsa-miR-545-3p 0 0 1
chr17:68551873|68555743 hsa-miR-637 0 1 1
chr17:68551873|68555743 hsa-miR-641 0 1 1
chr17:68551873|68555743 hsa-miR-1301-5p 0 0 1
chr17:68551873|68555743 hsa-miR-1301-3p 0 0 1
chr17:68551873|68555743 hsa-miR-1827 0 0 1
chr17:68551873|68555743 hsa-miR-145-5p 0 1 1
chr17:68551873|68555743 hsa-miR-512-3p 0 1 1
chr17:68551873|68555743 hsa-miR-615-5p 1 0 1
chr17:68551873|68555743 hsa-miR-146b-3p 0 0 1
chr17:68551873|68555743 hsa-miR-1184 1 1 1
chr17:68551873|68555743 hsa-miR-1224-3p 0 0 1
chr17:68551873|68555743 hsa-miR-1207-3p 0 0 1
chr17:68551873|68555743 hsa-miR-188-3p 0 0 1
chr17:68551873|68555743 hsa-miR-582-5p 0 0 1
chr17:68551873|68555743 hsa-miR-509-3-5p 0 0 1
chr17:68551873|68555743 hsa-miR-509-5p 0 0 1
chr17:68551873|68555743 hsa-miR-876-5p 0 0 1
chr17:68551873|68555743 hsa-miR-1260 0 0 1
chr17:68551873|68555743 hsa-miR-1280 0 0 1
chr17:68551873|68555743 hsa-miR-1274b 0 0 1
chr17:68551873|68555743 hsa-miR-138 0 0 1
chr17:68551873|68555743 hsa-miR-544 0 0 1
chr17:68551873|68555743 hsa-miR-661 1 0 0
chr17:68551873|68555743 hsa-miR-2278 0 1 0
chr17:68551873|68555743 hsa-miR-718 1 0 0
chr17:68551873|68555743 hsa-miR-544b 0 1 0
chr17:68551873|68555743 hsa-miR-320e 0 1 0
chr17:68551873|68555743 hsa-miR-3661 1 0 0
chr17:68551873|68555743 hsa-miR-4429 1 0 0
chr17:68551873|68555743 hsa-miR-3976 0 1 0
chr17:68551873|68555743 hsa-miR-4660 0 1 0
chr17:68551873|68555743 hsa-miR-4696 0 1 0
chr17:68551873|68555743 hsa-miR-4706 1 0 0
chr17:68551873|68555743 hsa-miR-5047 0 1 0
chr17:68551873|68555743 hsa-miR-5787 1 0 0
chr17:68551873|68555743 hsa-miR-138-5p 1 1 0
chr17:68551873|68555743 hsa-miR-4731-5p 1 1 0
chr17:68551873|68555743 hsa-miR-6836-3p 1 1 0
chr17:68551873|68555743 hsa-miR-6822-3p 1 1 0
chr17:68551873|68555743 hsa-miR-6720-5p 0 1 0
chr17:68551873|68555743 hsa-miR-7160-5p 0 1 0
chr17:68551873|68555743 hsa-miR-6741-5p 1 0 0
chr17:68551873|68555743 hsa-miR-770-5p 1 0 0
chr17:68551873|68555743 hsa-miR-5589-5p 0 1 0
chr17:68551873|68555743 hsa-miR-6742-5p 0 1 0
chr17:68551873|68555743 hsa-miR-3130-3p 0 1 0
chr17:68551873|68555743 hsa-miR-6765-3p 1 1 0
chr17:68551873|68555743 hsa-miR-4436b-5p 1 0 0
chr17:68551873|68555743 hsa-miR-939-3p 1 1 0
chr17:68551873|68555743 hsa-miR-1226-5p 1 0 0
chr17:68551873|68555743 hsa-miR-7113-3p 1 1 0
chr17:68551873|68555743 hsa-miR-6771-5p 1 0 0
chr17:68551873|68555743 hsa-miR-425-3p 1 1 0
chr17:68551873|68555743 hsa-miR-3690 0 1 0
chr17:68551873|68555743 hsa-miR-1304-3p 0 1 0
chr17:68551873|68555743 hsa-miR-2276-3p 0 1 0
chr17:68551873|68555743 hsa-miR-194-3p 0 1 0
chr17:68551873|68555743 hsa-miR-7112-5p 1 0 0
chr17:68551873|68555743 hsa-miR-6778-3p 0 1 0
chr17:68551873|68555743 hsa-miR-6859-3p 0 1 0
chr17:68551873|68555743 hsa-miR-1296-3p 0 1 0
chr17:68551873|68555743 hsa-miR-4717-5p 1 0 0
chr17:68551873|68555743 hsa-miR-329-5p 0 1 0
chr17:68551873|68555743 hsa-miR-3127-3p 1 0 0
chr17:68551873|68555743 hsa-miR-328-5p 1 0 0
chr17:68551873|68555743 hsa-miR-6724-5p 1 0 0
chr17:68551873|68555743 hsa-miR-6805-3p 1 0 0
chr17:68551873|68555743 hsa-miR-4723-3p 0 1 0
chr17:68551873|68555743 hsa-miR-6512-3p 0 1 0
chr17:68551873|68555743 hsa-miR-6769b-3p 0 1 0
chr17:68551873|68555743 hsa-miR-1295b-5p 0 1 0
chr17:68551873|68555743 hsa-miR-5195-3p 0 1 0
chr17:68551873|68555743 hsa-miR-4482-5p 0 1 0
chr17:68551873|68555743 hsa-miR-412-3p 1 0 0
chr17:68551873|68555743 hsa-miR-3118 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:68551873|68555743
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MGLNMAFPKSENLSTSLRWTPLGFTIWVQSHAPSKAFSS
Nucleotide Sequence ATGGGTTTGAACATGGCCTTCCCGAAATCCGAGAACCTCAGCACCAGCTTGAGGTGGACCCCACTGGGTTTCACAATCTGGGTGCAGTCACATGCCCCCAGCAAGGCTTTCTCATCTTGA
CircID chr17:68551873|68555743
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MASSRSCSGGSREVRFICSLYILCR
Nucleotide Sequence CTGGCCTCGAGTCGGAGCTGCAGTGGGGGGTCCAGGGAGGTAAGGTTCATCTGCTCTCTGTACATCTTGTGTCGC
CircID chr17:68551873|68555743
ORF Type ORF3
Protein Length 78
Nucleotide Length 234
Protein Sequence MGAVTCPQQGFLILTVISTDGGKVPHVLQKFADNRAGPGVEPMAVNTQVELDPAGLESELQWGVQGGKVHLLSVHLVS
Nucleotide Sequence CTGGGTGCAGTCACATGCCCCCAGCAAGGCTTTCTCATCTTGACTGTAATCAGCACTGATGGTGGGAAAGTGCCTCATGTCTTGCAGAAGTTTGCTGACAACAGGGCTGGACCGGGAGTAGAGCCCATGGCGGTTAATACCCAGGTGGAACTGGACCCAGCTGGCCTCGAGTCGGAGCTGCAGTGGGGGGTCCAGGGAGGTAAGGTTCATCTGCTCTCTGTACATCTTGTGTCG
CircID chr17:68551873|68555743
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MHPDCETQWGPPQAGAEVLGFREGHVQTHE
Nucleotide Sequence CTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAGGCCATGTTCAAACCCATGAG
CircID chr17:68551873|68555743
ORF Type ORF5
Protein Length 101
Nucleotide Length 303
Protein Sequence MYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVSKLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPM
Nucleotide Sequence ATGTACAGAGAGCAGATGAACCTTACCTCCCTGGACCCCCCACTGCAGCTCCGACTCGAGGCCAGCTGGGTCCAGTTCCACCTGGGTATTAACCGCCATGGGCTCTACTCCCGGTCCAGCCCTGTTGTCAGCAAACTTCTGCAAGACATGAGGCACTTTCCCACCATCAGTGCTGATTACAGTCAAGATGAGAAAGCCTTGCTGGGGGCATGTGACTGCACCCAGATTGTGAAACCCAGTGGGGTCCACCTCAAGCTGGTGCTGAGGTTCTCGGATTTCGGGAAGGCCATGTTCAAACCCATG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab