CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7203424|7203806
Strand -
CircType exon
Host Gene ENSG00000132535.17;
Algorism CIRI2;
Sequence CTTTAGGCCCCTTGATGAGCTTGATCTCCATGACCTTCTCAGCCGGGGGCTTCCGGCGCATGACATAGAGGCGAACGATGGAGCCTGCCTCTTTGAGGGCTTCCACCGCCGCTGAGTGGGTCACCTCGCGCACGTCCACTTCATTTACAAACAGGATGCTGTCGTTGACCCTGGGAGCAGCAAGGTGGGCCTGAGCCAAGAGCTTCCTGCTGCCCTGGCCCTCCCTCTCCAGGGACCAAGCAACCTAACCCCTGTCTCCTCTCCCCACCTGAGGCGGCCATCCTGGGCCGCAGCCCCACCAGGAATGATCTTGGTGATGAAAATGGATGGGTCGTCACCGATGTGTGGGTTGTCAGTGCCACCTGCGATGCTGAAGCCCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7203424|7203806 hsa-miR-214-5p 0 0 1
chr17:7203424|7203806 hsa-miR-214-3p 0 0 1
chr17:7203424|7203806 hsa-miR-185-5p 0 0 1
chr17:7203424|7203806 hsa-miR-185-3p 0 0 1
chr17:7203424|7203806 hsa-miR-133b -3 0 1
chr17:7203424|7203806 hsa-miR-484 -9 0 1
chr17:7203424|7203806 hsa-miR-493-5p 0 0 1
chr17:7203424|7203806 hsa-miR-493-3p 0 0 1
chr17:7203424|7203806 hsa-miR-551a -6 1 1
chr17:7203424|7203806 hsa-miR-551b-5p 0 0 1
chr17:7203424|7203806 hsa-miR-551b-3p 0 0 1
chr17:7203424|7203806 hsa-miR-573 -9 1 1
chr17:7203424|7203806 hsa-miR-583 -8 1 1
chr17:7203424|7203806 hsa-miR-604 -9 1 1
chr17:7203424|7203806 hsa-miR-612 -12 0 1
chr17:7203424|7203806 hsa-miR-620 -10 0 1
chr17:7203424|7203806 hsa-miR-541-5p 0 0 1
chr17:7203424|7203806 hsa-miR-541-3p 0 0 1
chr17:7203424|7203806 hsa-miR-939-5p 0 0 1
chr17:7203424|7203806 hsa-miR-939-3p 0 0 1
chr17:7203424|7203806 hsa-miR-940 -12 0 1
chr17:7203424|7203806 hsa-miR-1253 -8 0 1
chr17:7203424|7203806 hsa-miR-1270 -12 0 1
chr17:7203424|7203806 hsa-miR-1281 -4 0 1
chr17:7203424|7203806 hsa-miR-1321 -2 0 1
chr17:7203424|7203806 hsa-miR-1827 -7 0 1
chr17:7203424|7203806 hsa-miR-512-5p -2 0 1
chr17:7203424|7203806 hsa-miR-671-5p -20 1 1
chr17:7203424|7203806 hsa-miR-125a-3p -15 0 1
chr17:7203424|7203806 hsa-miR-491-5p -15 0 1
chr17:7203424|7203806 hsa-miR-654-5p -9 0 1
chr17:7203424|7203806 hsa-miR-1224-3p -1 1 1
chr17:7203424|7203806 hsa-miR-490-5p -8 0 1
chr17:7203424|7203806 hsa-miR-1300 0 0 1
chr17:7203424|7203806 hsa-miR-1285 0 0 1
chr17:7203424|7203806 hsa-miR-24 0 0 1
chr17:7203424|7203806 hsa-miR-549 0 0 1
chr17:7203424|7203806 hsa-miR-133a 0 0 1
chr17:7203424|7203806 hsa-miR-923 0 0 1
chr17:7203424|7203806 hsa-miR-3175 -17 1 0
chr17:7203424|7203806 hsa-miR-3665 -7 1 0
chr17:7203424|7203806 hsa-miR-3943 -11 1 0
chr17:7203424|7203806 hsa-miR-378g -9 1 0
chr17:7203424|7203806 hsa-miR-3960 -17 1 0
chr17:7203424|7203806 hsa-miR-3974 -10 1 0
chr17:7203424|7203806 hsa-miR-4683 -12 1 0
chr17:7203424|7203806 hsa-miR-4689 -25 1 0
chr17:7203424|7203806 hsa-miR-4739 -27 1 0
chr17:7203424|7203806 hsa-miR-6075 -11 1 0
chr17:7203424|7203806 hsa-miR-6127 -16 1 0
chr17:7203424|7203806 hsa-miR-6133 -19 1 0
chr17:7203424|7203806 hsa-miR-8072 -18 1 0
chr17:7203424|7203806 hsa-miR-8085 -18 1 0
chr17:7203424|7203806 hsa-miR-8089 -17 1 0
chr17:7203424|7203806 hsa-miR-92a-2-5p -15 1 0
chr17:7203424|7203806 hsa-miR-6873-5p -12 1 0
chr17:7203424|7203806 hsa-miR-1178-5p -9 1 0
chr17:7203424|7203806 hsa-miR-3151-5p -17 1 0
chr17:7203424|7203806 hsa-miR-6796-3p -7 1 0
chr17:7203424|7203806 hsa-miR-3150b-3p -18 1 0
chr17:7203424|7203806 hsa-miR-5006-5p -19 1 0
chr17:7203424|7203806 hsa-miR-3934-3p -7 1 0
chr17:7203424|7203806 hsa-miR-7109-5p -27 1 0
chr17:7203424|7203806 hsa-miR-3944-3p -10 1 0
chr17:7203424|7203806 hsa-miR-4640-5p -23 1 0
chr17:7203424|7203806 hsa-miR-7854-3p -12 1 0
chr17:7203424|7203806 hsa-miR-149-3p -21 1 0
chr17:7203424|7203806 hsa-miR-6895-5p -11 1 0
chr17:7203424|7203806 hsa-miR-4707-5p -17 1 0
chr17:7203424|7203806 hsa-miR-381-5p -4 1 0
chr17:7203424|7203806 hsa-miR-208a-5p -12 1 0
chr17:7203424|7203806 hsa-miR-1180-5p -9 1 0
chr17:7203424|7203806 hsa-miR-4524a-3p -14 1 0
chr17:7203424|7203806 hsa-miR-888-3p -3 1 0
chr17:7203424|7203806 hsa-miR-3200-3p -7 1 0
chr17:7203424|7203806 hsa-miR-4787-3p -7 1 0
chr17:7203424|7203806 hsa-miR-4763-3p -22 1 0
chr17:7203424|7203806 hsa-miR-6893-5p -13 1 0
chr17:7203424|7203806 hsa-miR-6756-5p -29 1 0
chr17:7203424|7203806 hsa-miR-6815-5p -18 1 0
chr17:7203424|7203806 hsa-miR-6763-5p -21 1 0
chr17:7203424|7203806 hsa-miR-6879-5p -12 1 0
chr17:7203424|7203806 hsa-miR-7111-5p -22 1 0
chr17:7203424|7203806 hsa-miR-1915-3p -15 1 0
chr17:7203424|7203806 hsa-miR-4728-5p -22 1 0
chr17:7203424|7203806 hsa-miR-4632-5p -18 1 0
chr17:7203424|7203806 hsa-miR-4726-5p -16 1 0
chr17:7203424|7203806 hsa-miR-6735-5p -16 1 0
chr17:7203424|7203806 hsa-miR-4436b-3p -10 1 0
chr17:7203424|7203806 hsa-miR-7843-5p -12 1 0
chr17:7203424|7203806 hsa-miR-6785-5p -14 1 0
chr17:7203424|7203806 hsa-miR-3928-5p -16 1 0
chr17:7203424|7203806 hsa-miR-6837-5p -16 1 0
chr17:7203424|7203806 hsa-miR-3619-5p -11 1 0
chr17:7203424|7203806 hsa-miR-6764-5p -10 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:7203424|7203806
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MGRSPTRNDLGDENGWVVTDVWVVSATCDAEAQ
Nucleotide Sequence CTGGGCCGCAGCCCCACCAGGAATGATCTTGGTGATGAAAATGGATGGGTCGTCACCGATGTGTGGGTTGTCAGTGCCACCTGCGATGCTGAAGCCCAG
CircID chr17:7203424|7203806
ORF Type ORF2
Protein Length 64
Nucleotide Length 192
Protein Sequence MSQELPAALALPLQGPSNLTPVSSPHLRRPSWAAAPPGMILVMKMDGSSPMCGLSVPPAMLKPR
Nucleotide Sequence CTGAGCCAAGAGCTTCCTGCTGCCCTGGCCCTCCCTCTCCAGGGACCAAGCAACCTAACCCCTGTCTCCTCTCCCCACCTGAGGCGGCCATCCTGGGCCGCAGCCCCACCAGGAATGATCTTGGTGATGAAAATGGATGGGTCGTCACCGATGTGTGGGTTGTCAGTGCCACCTGCGATGCTGAAGCCCAGA
CircID chr17:7203424|7203806
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MEPASLRASTAAEWVTSRTSTSFTNRMLSLTLGAARWA
Nucleotide Sequence ATGGAGCCTGCCTCTTTGAGGGCTTCCACCGCCGCTGAGTGGGTCACCTCGCGCACGTCCACTTCATTTACAAACAGGATGCTGTCGTTGACCCTGGGAGCAGCAAGGTGGGCCTGA
CircID chr17:7203424|7203806
ORF Type ORF4
Protein Length 71
Nucleotide Length 216
Protein Sequence MTTHTSVTTHPFSSPRSFLVGLRPRMAASGGERRQGLGCLVPGEGGPGQQEALGSGPPCCSQGQRQHPVCK
Nucleotide Sequence CTGACAACCCACACATCGGTGACGACCCATCCATTTTCATCACCAAGATCATTCCTGGTGGGGCTGCGGCCCAGGATGGCCGCCTCAGGTGGGGAGAGGAGACAGGGGTTAGGTTGCTTGGTCCCTGGAGAGGGAGGGCCAGGGCAGCAGGAAGCTCTTGGCTCAGGCCCACCTTGCTGCTCCCAGGGTCAACGACAGCATCCTGTTTGTAAATGA
CircID chr17:7203424|7203806
ORF Type ORF5
Protein Length 77
Nucleotide Length 231
Protein Sequence MEREGQGSRKLLAQAHLAAPRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPK
Nucleotide Sequence CTGGAGAGGGAGGGCCAGGGCAGCAGGAAGCTCTTGGCTCAGGCCCACCTTGCTGCTCCCAGGGTCAACGACAGCATCCTGTTTGTAAATGAAGTGGACGTGCGCGAGGTGACCCACTCAGCGGCGGTGGAAGCCCTCAAAGAGGCAGGCTCCATCGTTCGCCTCTATGTCATGCGCCGGAAGCCCCCGGCTGAGAAGGTCATGGAGATCAAGCTCATCAAGGGGCCTAAA
CircID chr17:7203424|7203806
ORF Type ORF6
Protein Length 78
Nucleotide Length 237
Protein Sequence LGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRWGEETGVRLLGPWRGRARAAGSSWLRPTLLLPGSTTASCL
Nucleotide Sequence CTGGGCTTCAGCATCGCAGGTGGCACTGACAACCCACACATCGGTGACGACCCATCCATTTTCATCACCAAGATCATTCCTGGTGGGGCTGCGGCCCAGGATGGCCGCCTCAGGTGGGGAGAGGAGACAGGGGTTAGGTTGCTTGGTCCCTGGAGAGGGAGGGCCAGGGCAGCAGGAAGCTCTTGGCTCAGGCCCACCTTGCTGCTCCCAGGGTCAACGACAGCATCCTGTTTGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab