CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7224480|7224697
Strand +
CircType exon
Host Gene ENSG00000072778.18;
Algorism CIRI2;
Sequence CATGGCATAGAGGTCGATGGCCCCGTCTGCCAGCCGCTGCAGCAGAAACTGTTCATCTGTCCGGTAGGTGGGGTGGGGGTGGGGGTGGGGGCATTAGTCTCAAGGAGAGGAAAGGGAGGGGCGGAATGGTGTAGAGCTCACTTACTGACAATCCCCTTCTTGTGTTTTATCAGCTTGGCCTCCACCACAGTGGCAAACTGCTCCAGAGCCCGTACTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7224480|7224697 hsa-miR-204-5p 0 0 1
chr17:7224480|7224697 hsa-miR-204-3p 0 0 1
chr17:7224480|7224697 hsa-miR-211-5p 0 0 1
chr17:7224480|7224697 hsa-miR-211-3p 0 0 1
chr17:7224480|7224697 hsa-miR-223-5p 0 0 1
chr17:7224480|7224697 hsa-miR-223-3p 0 0 1
chr17:7224480|7224697 hsa-miR-650 0 0 1
chr17:7224480|7224697 hsa-miR-760 1 1 1
chr17:7224480|7224697 hsa-miR-1238-5p 0 0 1
chr17:7224480|7224697 hsa-miR-1238-3p 0 0 1
chr17:7224480|7224697 hsa-miR-1184 0 1 1
chr17:7224480|7224697 hsa-miR-1224-3p 0 1 1
chr17:7224480|7224697 hsa-miR-483-5p 0 0 1
chr17:7224480|7224697 hsa-miR-516b 0 0 1
chr17:7224480|7224697 hsa-miR-544 0 0 1
chr17:7224480|7224697 hsa-miR-219-5p 0 0 1
chr17:7224480|7224697 hsa-miR-365 0 0 1
chr17:7224480|7224697 hsa-miR-762 0 1 0
chr17:7224480|7224697 hsa-miR-718 0 1 0
chr17:7224480|7224697 hsa-miR-3154 0 1 0
chr17:7224480|7224697 hsa-miR-3672 0 1 0
chr17:7224480|7224697 hsa-miR-4450 0 1 0
chr17:7224480|7224697 hsa-miR-3135b 1 0 0
chr17:7224480|7224697 hsa-miR-4466 1 0 0
chr17:7224480|7224697 hsa-miR-3960 0 1 0
chr17:7224480|7224697 hsa-miR-3975 0 1 0
chr17:7224480|7224697 hsa-miR-4780 0 1 0
chr17:7224480|7224697 hsa-miR-5683 0 1 0
chr17:7224480|7224697 hsa-miR-6071 0 1 0
chr17:7224480|7224697 hsa-miR-6081 1 0 0
chr17:7224480|7224697 hsa-miR-12121 1 0 0
chr17:7224480|7224697 hsa-miR-181a-3p 0 1 0
chr17:7224480|7224697 hsa-miR-6892-3p 1 0 0
chr17:7224480|7224697 hsa-miR-6089 1 0 0
chr17:7224480|7224697 hsa-miR-6880-5p 1 1 0
chr17:7224480|7224697 hsa-miR-7847-3p 1 1 0
chr17:7224480|7224697 hsa-miR-7154-3p 1 0 0
chr17:7224480|7224697 hsa-miR-4655-5p 1 0 0
chr17:7224480|7224697 hsa-miR-877-3p 1 0 0
chr17:7224480|7224697 hsa-miR-4697-3p 1 0 0
chr17:7224480|7224697 hsa-miR-6786-5p 1 0 0
chr17:7224480|7224697 hsa-miR-7108-3p 0 1 0
chr17:7224480|7224697 hsa-miR-7111-3p 1 0 0
chr17:7224480|7224697 hsa-miR-6769a-3p 1 1 0
chr17:7224480|7224697 hsa-miR-4758-3p 1 1 0
chr17:7224480|7224697 hsa-miR-6887-3p 0 1 0
chr17:7224480|7224697 hsa-miR-6508-3p 0 1 0
chr17:7224480|7224697 hsa-miR-6865-3p 0 1 0
chr17:7224480|7224697 hsa-miR-6826-3p 0 1 0
chr17:7224480|7224697 hsa-miR-4749-3p 1 0 0
chr17:7224480|7224697 hsa-miR-2277-5p 1 0 0
chr17:7224480|7224697 hsa-miR-3124-3p 0 1 0
chr17:7224480|7224697 hsa-miR-3670 1 0 0
chr17:7224480|7224697 hsa-miR-1249-3p 1 1 0
chr17:7224480|7224697 hsa-miR-6800-3p 1 0 0
chr17:7224480|7224697 hsa-miR-3162-3p 0 1 0
chr17:7224480|7224697 hsa-miR-6787-5p 1 0 0
chr17:7224480|7224697 hsa-miR-6756-5p 1 0 0
chr17:7224480|7224697 hsa-miR-6819-5p 1 0 0
chr17:7224480|7224697 hsa-miR-4685-3p 0 1 0
chr17:7224480|7224697 hsa-miR-328-5p 1 0 0
chr17:7224480|7224697 hsa-miR-6762-5p 1 1 0
chr17:7224480|7224697 hsa-miR-6784-3p 0 1 0
chr17:7224480|7224697 hsa-miR-6805-3p 1 0 0
chr17:7224480|7224697 hsa-miR-4723-3p 1 0 0
chr17:7224480|7224697 hsa-miR-323b-5p 0 1 0
chr17:7224480|7224697 hsa-miR-410-5p 0 1 0
chr17:7224480|7224697 hsa-miR-6864-3p 0 1 0
chr17:7224480|7224697 hsa-miR-365a-3p 0 1 0
chr17:7224480|7224697 hsa-miR-365b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:7224480|7224697
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence MQQKLFICPVGGVGVGVGALVSRRGKGGAEWCRAHLLTIPFLCFISLASTTVANCSRART
Nucleotide Sequence CTGCAGCAGAAACTGTTCATCTGTCCGGTAGGTGGGGTGGGGGTGGGGGTGGGGGCATTAGTCTCAAGGAGAGGAAAGGGAGGGGCGGAATGGTGTAGAGCTCACTTACTGACAATCCCCTTCTTGTGTTTTATCAGCTTGGCCTCCACCACAGTGGCAAACTGCTCCAGAGCCCGTACT
CircID chr17:7224480|7224697
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MPAAAAETVHLSGRWGGGGGGGISLKERKGRGGMV
Nucleotide Sequence CTGCCAGCCGCTGCAGCAGAAACTGTTCATCTGTCCGGTAGGTGGGGTGGGGGTGGGGGTGGGGGCATTAGTCTCAAGGAGAGGAAAGGGAGGGGCGGAATGGTGTAG
CircID chr17:7224480|7224697
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MSVSELYTIPPLPFLSLRLMPPPPPPPHLPDR
Nucleotide Sequence TTGTCAGTAAGTGAGCTCTACACCATTCCGCCCCTCCCTTTCCTCTCCTTGAGACTAATGCCCCCACCCCCACCCCCACCCCACCTACCGGACAGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab