CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7241342|7241645
Strand -
CircType exon
Host Gene ENSG00000170296.8;
Algorism CIRI2;
Sequence CTGGTACAGCTGACCCATTGTGGCACTGGTGGGTGGAATGACATTGTTGACAAAGAAAAACAAGGCATCCTCAGCTCGGAGATGAATTCGCTTCCGGATCAAGAAGTAGAACTGACCAACTGCAAAAGATACAAGATGCAAGAAAGTCACAGAGGTCAAAAATGCCCTCAAAAGAACAGCTGCTAGGTGGAGCCTCCTCCCGCAGAGACTGCACTCCCACCCACAGGAAGCAAGCCTGAGTCTTGGATCAGGTTCCCACCTGTGAGATCAGAAGGCACCAGGTATTTCTTTTTGTCCAGGTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7241342|7241645 hsa-miR-15a-5p 0 0 1
chr17:7241342|7241645 hsa-miR-15a-3p 0 0 1
chr17:7241342|7241645 hsa-miR-192-5p 0 0 1
chr17:7241342|7241645 hsa-miR-192-3p 0 0 1
chr17:7241342|7241645 hsa-miR-215-5p 0 0 1
chr17:7241342|7241645 hsa-miR-215-3p 0 0 1
chr17:7241342|7241645 hsa-miR-223-5p 0 0 1
chr17:7241342|7241645 hsa-miR-223-3p 0 0 1
chr17:7241342|7241645 hsa-miR-15b-5p 0 0 1
chr17:7241342|7241645 hsa-miR-15b-3p 0 0 1
chr17:7241342|7241645 hsa-miR-134-5p 0 0 1
chr17:7241342|7241645 hsa-miR-134-3p 0 0 1
chr17:7241342|7241645 hsa-miR-195-5p 0 0 1
chr17:7241342|7241645 hsa-miR-195-3p 0 0 1
chr17:7241342|7241645 hsa-miR-424-5p 0 0 1
chr17:7241342|7241645 hsa-miR-424-3p 0 0 1
chr17:7241342|7241645 hsa-miR-484 0 0 1
chr17:7241342|7241645 hsa-miR-497-5p 0 0 1
chr17:7241342|7241645 hsa-miR-497-3p 0 0 1
chr17:7241342|7241645 hsa-miR-526b-5p 0 0 1
chr17:7241342|7241645 hsa-miR-526b-3p 0 0 1
chr17:7241342|7241645 hsa-miR-503-5p 0 0 1
chr17:7241342|7241645 hsa-miR-503-3p 0 0 1
chr17:7241342|7241645 hsa-miR-505-5p 0 0 1
chr17:7241342|7241645 hsa-miR-505-3p 0 0 1
chr17:7241342|7241645 hsa-miR-507 0 0 1
chr17:7241342|7241645 hsa-miR-510-5p 0 0 1
chr17:7241342|7241645 hsa-miR-510-3p 0 0 1
chr17:7241342|7241645 hsa-miR-552-5p 0 0 1
chr17:7241342|7241645 hsa-miR-552-3p 0 0 1
chr17:7241342|7241645 hsa-miR-557 0 0 1
chr17:7241342|7241645 hsa-miR-578 0 0 1
chr17:7241342|7241645 hsa-miR-593-5p 0 0 1
chr17:7241342|7241645 hsa-miR-593-3p 0 0 1
chr17:7241342|7241645 hsa-miR-616-5p 0 0 1
chr17:7241342|7241645 hsa-miR-616-3p 0 0 1
chr17:7241342|7241645 hsa-miR-619-5p 0 0 1
chr17:7241342|7241645 hsa-miR-619-3p 0 0 1
chr17:7241342|7241645 hsa-miR-631 0 0 1
chr17:7241342|7241645 hsa-miR-640 0 1 1
chr17:7241342|7241645 hsa-miR-643 0 0 1
chr17:7241342|7241645 hsa-miR-646 1 1 1
chr17:7241342|7241645 hsa-miR-765 0 0 1
chr17:7241342|7241645 hsa-miR-1227-5p 0 0 1
chr17:7241342|7241645 hsa-miR-1227-3p 0 0 1
chr17:7241342|7241645 hsa-miR-1237-5p 0 0 1
chr17:7241342|7241645 hsa-miR-1237-3p 0 0 1
chr17:7241342|7241645 hsa-miR-1293 0 0 1
chr17:7241342|7241645 hsa-miR-1304-5p 0 0 1
chr17:7241342|7241645 hsa-miR-1304-3p 0 0 1
chr17:7241342|7241645 hsa-miR-1292-5p 0 0 1
chr17:7241342|7241645 hsa-miR-1292-3p 0 0 1
chr17:7241342|7241645 hsa-miR-1825 0 0 1
chr17:7241342|7241645 hsa-miR-769-5p 0 0 1
chr17:7241342|7241645 hsa-miR-615-3p 0 0 1
chr17:7241342|7241645 hsa-miR-532-5p 0 0 1
chr17:7241342|7241645 hsa-miR-1207-3p 0 0 1
chr17:7241342|7241645 hsa-miR-513a-5p 0 0 1
chr17:7241342|7241645 hsa-miR-342-3p 0 0 1
chr17:7241342|7241645 hsa-miR-516a-3p 0 0 1
chr17:7241342|7241645 hsa-miR-450b-5p 0 0 1
chr17:7241342|7241645 hsa-miR-16 0 0 1
chr17:7241342|7241645 hsa-miR-220c 0 0 1
chr17:7241342|7241645 hsa-miR-768-3p 0 0 1
chr17:7241342|7241645 hsa-miR-1185 0 0 1
chr17:7241342|7241645 hsa-miR-612 1 0 0
chr17:7241342|7241645 hsa-miR-1260b 0 1 0
chr17:7241342|7241645 hsa-miR-4303 0 1 0
chr17:7241342|7241645 hsa-miR-4651 1 0 0
chr17:7241342|7241645 hsa-miR-4739 1 0 0
chr17:7241342|7241645 hsa-miR-5572 1 0 0
chr17:7241342|7241645 hsa-miR-5698 1 0 0
chr17:7241342|7241645 hsa-miR-6127 1 0 0
chr17:7241342|7241645 hsa-miR-92a-2-5p 0 1 0
chr17:7241342|7241645 hsa-miR-504-3p 0 1 0
chr17:7241342|7241645 hsa-miR-7106-5p 0 1 0
chr17:7241342|7241645 hsa-miR-7114-5p 1 0 0
chr17:7241342|7241645 hsa-miR-1301-3p 1 0 0
chr17:7241342|7241645 hsa-miR-6759-5p 1 1 0
chr17:7241342|7241645 hsa-miR-6748-5p 1 1 0
chr17:7241342|7241645 hsa-miR-2467-5p 0 1 0
chr17:7241342|7241645 hsa-miR-1226-5p 0 1 0
chr17:7241342|7241645 hsa-miR-1229-5p 1 0 0
chr17:7241342|7241645 hsa-miR-1228-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6749-5p 1 0 0
chr17:7241342|7241645 hsa-miR-149-3p 1 0 0
chr17:7241342|7241645 hsa-miR-3616-3p 0 1 0
chr17:7241342|7241645 hsa-miR-194-3p 0 1 0
chr17:7241342|7241645 hsa-miR-605-5p 0 1 0
chr17:7241342|7241645 hsa-miR-4695-3p 0 1 0
chr17:7241342|7241645 hsa-miR-4762-3p 0 1 0
chr17:7241342|7241645 hsa-miR-6769b-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6778-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6752-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6756-5p 1 1 0
chr17:7241342|7241645 hsa-miR-6769a-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6803-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6842-5p 1 0 0
chr17:7241342|7241645 hsa-miR-7107-5p 1 0 0
chr17:7241342|7241645 hsa-miR-7110-5p 1 0 0
chr17:7241342|7241645 hsa-miR-328-5p 1 0 0
chr17:7241342|7241645 hsa-miR-4745-5p 1 0 0
chr17:7241342|7241645 hsa-miR-4697-5p 1 0 0
chr17:7241342|7241645 hsa-miR-939-5p 1 0 0
chr17:7241342|7241645 hsa-miR-4758-5p 1 0 0
chr17:7241342|7241645 hsa-miR-3940-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6731-5p 1 0 0
chr17:7241342|7241645 hsa-miR-1285-3p 0 1 0
chr17:7241342|7241645 hsa-miR-6736-5p 1 0 0
chr17:7241342|7241645 hsa-miR-6766-5p 1 1 0
chr17:7241342|7241645 hsa-miR-4757-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7241342|7241645
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence LVQLTHCGTGGWNDIVDKEKQGILSSEMNSLPDQEVELTNCKRYKMQESHRGQKCPQKNSC
Nucleotide Sequence CTGGTACAGCTGACCCATTGTGGCACTGGTGGGTGGAATGACATTGTTGACAAAGAAAAACAAGGCATCCTCAGCTCGGAGATGAATTCGCTTCCGGATCAAGAAGTAGAACTGACCAACTGCAAAAGATACAAGATGCAAGAAAGTCACAGAGGTCAAAAATGCCCTCAAAAGAACAGCTGCTAG
CircID chr17:7241342|7241645
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MQKIQDARKSQRSKMPSKEQLLGGASSRRDCTPTHRKQA
Nucleotide Sequence CTGCAAAAGATACAAGATGCAAGAAAGTCACAGAGGTCAAAAATGCCCTCAAAAGAACAGCTGCTAGGTGGAGCCTCCTCCCGCAGAGACTGCACTCCCACCCACAGGAAGCAAGCCTGA
CircID chr17:7241342|7241645
ORF Type ORF3
Protein Length 51
Nucleotide Length 156
Protein Sequence MWVGVQSLREEAPPSSCSFEGIFDLCDFLASCIFCSWSVLLLDPEANSSPS
Nucleotide Sequence CTGTGGGTGGGAGTGCAGTCTCTGCGGGAGGAGGCTCCACCTAGCAGCTGTTCTTTTGAGGGCATTTTTGACCTCTGTGACTTTCTTGCATCTTGTATCTTTTGCAGTTGGTCAGTTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGAGCTGA
CircID chr17:7241342|7241645
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MRAFLTSVTFLHLVSFAVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQ
Nucleotide Sequence TTGAGGGCATTTTTGACCTCTGTGACTTTCTTGCATCTTGTATCTTTTGCAGTTGGTCAGTTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGAGCTGAGGATGCCTTGTTTTTCTTTGTCAACAATGTCATTCCACCCACCAGTGCCACAATGGGTCAGCTGTACCAG
CircID chr17:7241342|7241645
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MDKKKYLVPSDLTGGNLIQDSGLLPVGGSAVSAGGGST
Nucleotide Sequence CTGGACAAAAAGAAATACCTGGTGCCTTCTGATCTCACAGGTGGGAACCTGATCCAAGACTCAGGCTTGCTTCCTGTGGGTGGGAGTGCAGTCTCTGCGGGAGGAGGCTCCACCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab