CircRNA Information

General Information
circRNA Basic Information
CircID chr17:72994936|72995136
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGATACAGAGGTGAGTTAGGTAAGACCCTGCCCTAAAAAGCTTGCAGTAGCCAGTTAGGCAGCCAACAGCCATTCCCACTAGCATCTATGTCTCTTCTTCAACCTGGACAGAGAGTTAGATTATATATGATACAGCCCTGCCTTCCTGTCTTGACCTCATCTCTCAACACTTTCAAGCTCTCCATGGCAGGTTGAATGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:72994936|72995136 hsa-miR-198 0 0 1
chr17:72994936|72995136 hsa-miR-217-5p 0 0 1
chr17:72994936|72995136 hsa-miR-217-3p 0 0 1
chr17:72994936|72995136 hsa-miR-143-5p 0 0 1
chr17:72994936|72995136 hsa-miR-143-3p 0 0 1
chr17:72994936|72995136 hsa-miR-185-5p 0 0 1
chr17:72994936|72995136 hsa-miR-185-3p 0 0 1
chr17:72994936|72995136 hsa-miR-376c-5p 0 0 1
chr17:72994936|72995136 hsa-miR-376c-3p 0 0 1
chr17:72994936|72995136 hsa-miR-410-5p 0 0 1
chr17:72994936|72995136 hsa-miR-410-3p 0 0 1
chr17:72994936|72995136 hsa-miR-487a-5p 0 0 1
chr17:72994936|72995136 hsa-miR-487a-3p 0 0 1
chr17:72994936|72995136 hsa-miR-488-5p 0 0 1
chr17:72994936|72995136 hsa-miR-488-3p 0 0 1
chr17:72994936|72995136 hsa-miR-604 0 0 1
chr17:72994936|72995136 hsa-miR-618 0 0 1
chr17:72994936|72995136 hsa-miR-647 0 1 1
chr17:72994936|72995136 hsa-miR-1296-5p 0 0 1
chr17:72994936|72995136 hsa-miR-1296-3p 0 0 1
chr17:72994936|72995136 hsa-miR-892b 0 0 1
chr17:72994936|72995136 hsa-miR-940 0 1 1
chr17:72994936|72995136 hsa-miR-1182 0 0 1
chr17:72994936|72995136 hsa-miR-193a-5p 0 0 1
chr17:72994936|72995136 hsa-miR-1207-5p 0 0 1
chr17:72994936|72995136 hsa-miR-509-3-5p 0 0 1
chr17:72994936|72995136 hsa-miR-509-5p 0 0 1
chr17:72994936|72995136 hsa-miR-582-3p 0 0 1
chr17:72994936|72995136 hsa-miR-650 1 0 0
chr17:72994936|72995136 hsa-miR-3138 1 0 0
chr17:72994936|72995136 hsa-miR-3916 1 0 0
chr17:72994936|72995136 hsa-miR-4538 1 0 0
chr17:72994936|72995136 hsa-miR-4644 1 0 0
chr17:72994936|72995136 hsa-miR-4656 1 0 0
chr17:72994936|72995136 hsa-miR-4669 1 0 0
chr17:72994936|72995136 hsa-miR-4681 1 1 0
chr17:72994936|72995136 hsa-miR-4689 1 0 0
chr17:72994936|72995136 hsa-miR-4739 1 0 0
chr17:72994936|72995136 hsa-miR-5192 1 0 0
chr17:72994936|72995136 hsa-miR-6088 1 0 0
chr17:72994936|72995136 hsa-miR-6125 1 0 0
chr17:72994936|72995136 hsa-miR-6132 0 1 0
chr17:72994936|72995136 hsa-miR-6133 1 0 0
chr17:72994936|72995136 hsa-miR-504-3p 1 0 0
chr17:72994936|72995136 hsa-miR-4687-3p 1 1 0
chr17:72994936|72995136 hsa-miR-3692-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6515-5p 1 0 0
chr17:72994936|72995136 hsa-miR-7160-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6890-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6721-5p 1 1 0
chr17:72994936|72995136 hsa-miR-6768-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6882-3p 0 1 0
chr17:72994936|72995136 hsa-miR-1226-5p 1 0 0
chr17:72994936|72995136 hsa-miR-149-3p 1 0 0
chr17:72994936|72995136 hsa-miR-7112-5p 1 0 0
chr17:72994936|72995136 hsa-miR-345-5p 0 1 0
chr17:72994936|72995136 hsa-miR-3158-3p 1 0 0
chr17:72994936|72995136 hsa-miR-4727-3p 0 1 0
chr17:72994936|72995136 hsa-miR-208a-5p 0 1 0
chr17:72994936|72995136 hsa-miR-4524a-3p 1 0 0
chr17:72994936|72995136 hsa-miR-181c-5p 0 1 0
chr17:72994936|72995136 hsa-miR-6750-3p 0 1 0
chr17:72994936|72995136 hsa-miR-4763-3p 1 1 0
chr17:72994936|72995136 hsa-miR-6812-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6893-5p 1 0 0
chr17:72994936|72995136 hsa-miR-1343-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6726-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6754-5p 1 1 0
chr17:72994936|72995136 hsa-miR-6763-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6797-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6808-5p 1 1 0
chr17:72994936|72995136 hsa-miR-6879-5p 0 1 0
chr17:72994936|72995136 hsa-miR-5196-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6780b-5p 1 0 0
chr17:72994936|72995136 hsa-miR-10396b-5p 1 0 0
chr17:72994936|72995136 hsa-miR-939-5p 1 0 0
chr17:72994936|72995136 hsa-miR-4758-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6511a-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6731-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6856-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6891-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6785-5p 1 0 0
chr17:72994936|72995136 hsa-miR-4667-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6790-5p 1 0 0
chr17:72994936|72995136 hsa-miR-4756-5p 1 0 0
chr17:72994936|72995136 hsa-miR-6817-5p 1 1 0
chr17:72994936|72995136 hsa-miR-3617-5p 1 1 0
chr17:72994936|72995136 hsa-miR-550a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:72994936|72995136
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MSLLQPGQRVRLYMIQPCLPVLTSSLNTFKLSMAG
Nucleotide Sequence ATGTCTCTTCTTCAACCTGGACAGAGAGTTAGATTATATATGATACAGCCCTGCCTTCCTGTCTTGACCTCATCTCTCAACACTTTCAAGCTCTCCATGGCAGGTTGA
CircID chr17:72994936|72995136
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MLVGMAVGCLTGYCKLFRAGSYLTHLCIQ
Nucleotide Sequence ATGCTAGTGGGAATGGCTGTTGGCTGCCTAACTGGCTACTGCAAGCTTTTTAGGGCAGGGTCTTACCTAACTCACCTCTGTATCCAG
CircID chr17:72994936|72995136
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MESLKVLRDEVKTGRQGCIIYNLTLCPG
Nucleotide Sequence ATGGAGAGCTTGAAAGTGTTGAGAGATGAGGTCAAGACAGGAAGGCAGGGCTGTATCATATATAATCTAACTCTCTGTCCAGGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab