CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7311374|7311490
Strand -
CircType exon
Host Gene ENSG00000132507.16;
Algorism CIRI2;
Sequence CTATCACTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGGTATGGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7311374|7311490 hsa-miR-126-5p 0 0 1
chr17:7311374|7311490 hsa-miR-126-3p 0 0 1
chr17:7311374|7311490 hsa-miR-493-5p 0 0 1
chr17:7311374|7311490 hsa-miR-493-3p 0 0 1
chr17:7311374|7311490 hsa-miR-942-5p 0 0 1
chr17:7311374|7311490 hsa-miR-942-3p 0 0 1
chr17:7311374|7311490 hsa-miR-1236-5p 0 0 1
chr17:7311374|7311490 hsa-miR-1236-3p 0 0 1
chr17:7311374|7311490 hsa-miR-1266-5p 0 0 1
chr17:7311374|7311490 hsa-miR-1266-3p 0 0 1
chr17:7311374|7311490 hsa-miR-767-5p 0 0 1
chr17:7311374|7311490 hsa-miR-502-5p 0 0 1
chr17:7311374|7311490 hsa-miR-767-3p 0 1 1
chr17:7311374|7311490 hsa-miR-515-5p 0 0 1
chr17:7311374|7311490 hsa-miR-4270 0 1 0
chr17:7311374|7311490 hsa-miR-3909 0 1 0
chr17:7311374|7311490 hsa-miR-4469 0 1 0
chr17:7311374|7311490 hsa-miR-4518 0 1 0
chr17:7311374|7311490 hsa-miR-6081 0 1 0
chr17:7311374|7311490 hsa-miR-9718 1 0 0
chr17:7311374|7311490 hsa-miR-12128 0 1 0
chr17:7311374|7311490 hsa-miR-26b-3p 1 0 0
chr17:7311374|7311490 hsa-miR-6881-3p 1 0 0
chr17:7311374|7311490 hsa-miR-139-3p 0 1 0
chr17:7311374|7311490 hsa-miR-1915-5p 0 1 0
chr17:7311374|7311490 hsa-miR-877-3p 1 0 0
chr17:7311374|7311490 hsa-miR-6760-5p 0 1 0
chr17:7311374|7311490 hsa-miR-7161-3p 1 0 0
chr17:7311374|7311490 hsa-miR-7111-3p 0 1 0
chr17:7311374|7311490 hsa-miR-1237-3p 1 1 0
chr17:7311374|7311490 hsa-miR-6828-3p 0 1 0
chr17:7311374|7311490 hsa-miR-597-3p 1 1 0
chr17:7311374|7311490 hsa-miR-6872-3p 1 0 0
chr17:7311374|7311490 hsa-miR-7158-5p 0 1 0
chr17:7311374|7311490 hsa-miR-6852-3p 0 1 0
chr17:7311374|7311490 hsa-miR-6889-5p 0 1 0
chr17:7311374|7311490 hsa-miR-6792-3p 1 0 0
chr17:7311374|7311490 hsa-miR-4723-3p 1 0 0
chr17:7311374|7311490 hsa-miR-130a-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:7311374|7311490
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILVWC
Nucleotide Sequence CTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGGTATGGTGC

CircID chr17:7311374|7311490
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MLNLLAKVSLRETKVLSYLPAVLEQ
Nucleotide Sequence CTGCTCAATCTCCTTGCCAAGGTCTCCCTCAGGGAGACGAAGGTCCTCTCGTACCTCCCCGCTGTCCTGGAGCAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites