CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7314291|7314544
Strand -
CircType exon
Host Gene ENSG00000132522.14;
Algorism CIRI2;
Sequence CTCTGTTCCTTTCGCCTCCGTTTTTCTTCCTCATGTAAAACTTTCTTGAGCTGCAGGAAAAGCTGGTGCTTCTCTTCCTGTAGAGCCAAAAGCTTCTCCTCCAACTTCAGAATCTGGGATGGGGTGGGAAAAGAAGATGAAGGCAGGGAGAGTCAAACGAAGAAATCAAAGCTGGGAAAGTTCAAGGGACTGCTTACTTGTTCCTTGGTCTCCTCTAATGACATTCTCTCTTCCATCTCCTTTTTCTTCCTTCT
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7314291|7314544 hsa-miR-29a-5p 0 0 1
chr17:7314291|7314544 hsa-miR-29a-3p 0 0 1
chr17:7314291|7314544 hsa-miR-205-5p 0 0 1
chr17:7314291|7314544 hsa-miR-205-3p 0 0 1
chr17:7314291|7314544 hsa-miR-29c-5p 0 0 1
chr17:7314291|7314544 hsa-miR-29c-3p 0 0 1
chr17:7314291|7314544 hsa-miR-561-5p 0 0 1
chr17:7314291|7314544 hsa-miR-561-3p 0 0 1
chr17:7314291|7314544 hsa-miR-616-5p 0 0 1
chr17:7314291|7314544 hsa-miR-616-3p 0 0 1
chr17:7314291|7314544 hsa-miR-623 0 0 1
chr17:7314291|7314544 hsa-miR-1301-5p 0 0 1
chr17:7314291|7314544 hsa-miR-1301-3p 0 0 1
chr17:7314291|7314544 hsa-miR-765 0 1 1
chr17:7314291|7314544 hsa-miR-877-5p 0 0 1
chr17:7314291|7314544 hsa-miR-877-3p 0 0 1
chr17:7314291|7314544 hsa-miR-760 0 0 1
chr17:7314291|7314544 hsa-miR-1226-5p 0 0 1
chr17:7314291|7314544 hsa-miR-1226-3p 0 0 1
chr17:7314291|7314544 hsa-miR-1282 0 0 1
chr17:7314291|7314544 hsa-miR-1252-5p 0 0 1
chr17:7314291|7314544 hsa-miR-1252-3p 0 0 1
chr17:7314291|7314544 hsa-miR-139-5p 0 0 1
chr17:7314291|7314544 hsa-miR-1184 0 0 1
chr17:7314291|7314544 hsa-miR-1224-3p 0 0 1
chr17:7314291|7314544 hsa-miR-188-3p 0 0 1
chr17:7314291|7314544 hsa-miR-1260 0 0 1
chr17:7314291|7314544 hsa-miR-1280 0 0 1
chr17:7314291|7314544 hsa-miR-7 0 0 1
chr17:7314291|7314544 hsa-miR-768-5p 0 0 1
chr17:7314291|7314544 hsa-miR-29b 0 0 1
chr17:7314291|7314544 hsa-miR-1260a 0 1 0
chr17:7314291|7314544 hsa-miR-1275 0 1 0
chr17:7314291|7314544 hsa-miR-1260b 0 1 0
chr17:7314291|7314544 hsa-miR-4271 1 0 0
chr17:7314291|7314544 hsa-miR-4274 0 1 0
chr17:7314291|7314544 hsa-miR-3916 1 0 0
chr17:7314291|7314544 hsa-miR-4428 0 1 0
chr17:7314291|7314544 hsa-miR-4462 1 0 0
chr17:7314291|7314544 hsa-miR-4476 1 0 0
chr17:7314291|7314544 hsa-miR-4510 1 0 0
chr17:7314291|7314544 hsa-miR-4533 1 0 0
chr17:7314291|7314544 hsa-miR-4534 1 0 0
chr17:7314291|7314544 hsa-miR-4657 1 0 0
chr17:7314291|7314544 hsa-miR-4660 1 0 0
chr17:7314291|7314544 hsa-miR-4689 1 0 0
chr17:7314291|7314544 hsa-miR-4739 1 1 0
chr17:7314291|7314544 hsa-miR-4780 0 1 0
chr17:7314291|7314544 hsa-miR-4784 0 1 0
chr17:7314291|7314544 hsa-miR-5739 1 0 0
chr17:7314291|7314544 hsa-miR-6077 0 1 0
chr17:7314291|7314544 hsa-miR-6124 1 1 0
chr17:7314291|7314544 hsa-miR-6127 1 0 0
chr17:7314291|7314544 hsa-miR-6133 1 0 0
chr17:7314291|7314544 hsa-miR-7974 1 0 0
chr17:7314291|7314544 hsa-miR-8057 0 1 0
chr17:7314291|7314544 hsa-miR-8085 1 0 0
chr17:7314291|7314544 hsa-miR-6747-3p 0 1 0
chr17:7314291|7314544 hsa-miR-6765-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6822-3p 1 0 0
chr17:7314291|7314544 hsa-miR-10b-3p 0 1 0
chr17:7314291|7314544 hsa-miR-6833-5p 1 0 0
chr17:7314291|7314544 hsa-miR-4786-5p 0 1 0
chr17:7314291|7314544 hsa-miR-6757-5p 1 0 0
chr17:7314291|7314544 hsa-miR-7847-3p 1 0 0
chr17:7314291|7314544 hsa-miR-4695-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6746-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6873-3p 0 1 0
chr17:7314291|7314544 hsa-miR-1224-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6760-5p 1 1 0
chr17:7314291|7314544 hsa-miR-3150b-3p 0 1 0
chr17:7314291|7314544 hsa-miR-6763-3p 1 0 0
chr17:7314291|7314544 hsa-miR-4707-3p 1 0 0
chr17:7314291|7314544 hsa-miR-185-5p 1 0 0
chr17:7314291|7314544 hsa-miR-7113-3p 1 1 0
chr17:7314291|7314544 hsa-miR-3202 0 1 0
chr17:7314291|7314544 hsa-miR-6809-3p 1 0 0
chr17:7314291|7314544 hsa-miR-4446-5p 0 1 0
chr17:7314291|7314544 hsa-miR-7106-3p 1 0 0
chr17:7314291|7314544 hsa-miR-6867-3p 0 1 0
chr17:7314291|7314544 hsa-miR-208a-5p 0 1 0
chr17:7314291|7314544 hsa-miR-6752-3p 1 1 0
chr17:7314291|7314544 hsa-miR-3140-3p 0 1 0
chr17:7314291|7314544 hsa-miR-5585-5p 0 1 0
chr17:7314291|7314544 hsa-miR-6851-5p 1 0 0
chr17:7314291|7314544 hsa-miR-11181-3p 1 1 0
chr17:7314291|7314544 hsa-miR-1249-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6788-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6797-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6780b-5p 1 0 0
chr17:7314291|7314544 hsa-miR-10526-3p 1 0 0
chr17:7314291|7314544 hsa-miR-6858-5p 1 0 0
chr17:7314291|7314544 hsa-miR-6511a-5p 1 0 0
chr17:7314291|7314544 hsa-miR-3173-3p 1 1 0
chr17:7314291|7314544 hsa-miR-6876-5p 0 1 0
chr17:7314291|7314544 hsa-miR-4716-3p 1 0 0
chr17:7314291|7314544 hsa-miR-5009-5p 0 1 0
chr17:7314291|7314544 hsa-miR-519a-2-5p 0 1 0
chr17:7314291|7314544 hsa-miR-520b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7314291|7314544
ORF Type ORF1
Protein Length 69
Nucleotide Length 207
Protein Sequence MSCRKSWCFSSCRAKSFSSNFRIWDGVGKEDEGRESQTKKSKLGKFKGLLTCSLVSSNDILSSISFFFL
Nucleotide Sequence TTGAGCTGCAGGAAAAGCTGGTGCTTCTCTTCCTGTAGAGCCAAAAGCTTCTCCTCCAACTTCAGAATCTGGGATGGGGTGGGAAAAGAAGATGAAGGCAGGGAGAGTCAAACGAAGAAATCAAAGCTGGGAAAGTTCAAGGGACTGCTTACTTGTTCCTTGGTCTCCTCTAATGACATTCTCTCTTCCATCTCCTTTTTCTTCCTT
CircID chr17:7314291|7314544
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MGWEKKMKAGRVKRRNQSWESSRDCLLVPWSPLMTFSLPSPFSSF
Nucleotide Sequence ATGGGGTGGGAAAAGAAGATGAAGGCAGGGAGAGTCAAACGAAGAAATCAAAGCTGGGAAAGTTCAAGGGACTGCTTACTTGTTCCTTGGTCTCCTCTAATGACATTCTCTCTTCCATCTCCTTTTTCTTCCTTC
CircID chr17:7314291|7314544
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MEERMSLEETKEQVSSPLNFPSFDFFV
Nucleotide Sequence ATGGAAGAGAGAATGTCATTAGAGGAGACCAAGGAACAAGTAAGCAGTCCCTTGAACTTTCCCAGCTTTGATTTCTTCGTTTGA
CircID chr17:7314291|7314544
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MPSSSFPTPSQILKLEEKLLALQEEKHQLFLQLKKVLHEEEKRRRKEQ
Nucleotide Sequence CTGCCTTCATCTTCTTTTCCCACCCCATCCCAGATTCTGAAGTTGGAGGAGAAGCTTTTGGCTCTACAGGAAGAGAAGCACCAGCTTTTCCTGCAGCTCAAGAAAGTTTTACATGAGGAAGAAAAACGGAGGCGAAAGGAACAG
CircID chr17:7314291|7314544
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MTLPAFIFFSHPIPDSEVGGEAFGSTGREAPAFPAAQESFT
Nucleotide Sequence TTGACTCTCCCTGCCTTCATCTTCTTTTCCCACCCCATCCCAGATTCTGAAGTTGGAGGAGAAGCTTTTGGCTCTACAGGAAGAGAAGCACCAGCTTTTCCTGCAGCTCAAGAAAGTTTTACATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab