CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7315980|7316156
Strand +
CircType exon
Host Gene ENSG00000215041.8;
Algorism CIRI2;
Sequence ACTCCTCTGTGCCCTGCTGGTACGGGTGGAATGAGGGGTGAGACACCACTACTACAAGCACAGTCGGGCCGCGGGCCCATGGACTCTGAGTGGCGACTGCCTCCACCTCATTCCCGTGACTCGTGGCATGCGCAGGTGCTGGAGCTTGGCAGCCGCGCAGGAGCATGTAGGCAGGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7315980|7316156 hsa-miR-99a-5p 0 0 1
chr17:7315980|7316156 hsa-miR-99a-3p 0 0 1
chr17:7315980|7316156 hsa-miR-100-5p 0 0 1
chr17:7315980|7316156 hsa-miR-100-3p 0 0 1
chr17:7315980|7316156 hsa-miR-214-5p 0 0 1
chr17:7315980|7316156 hsa-miR-214-3p 0 0 1
chr17:7315980|7316156 hsa-miR-99b-5p 0 0 1
chr17:7315980|7316156 hsa-miR-99b-3p 0 0 1
chr17:7315980|7316156 hsa-miR-596 0 1 1
chr17:7315980|7316156 hsa-miR-634 0 0 1
chr17:7315980|7316156 hsa-miR-636 1 0 1
chr17:7315980|7316156 hsa-miR-650 1 1 1
chr17:7315980|7316156 hsa-miR-766-5p 0 0 1
chr17:7315980|7316156 hsa-miR-766-3p 0 0 1
chr17:7315980|7316156 hsa-miR-1229-5p 0 0 1
chr17:7315980|7316156 hsa-miR-1229-3p 0 0 1
chr17:7315980|7316156 hsa-miR-1827 0 0 1
chr17:7315980|7316156 hsa-miR-140-5p 0 0 1
chr17:7315980|7316156 hsa-miR-296-5p 0 0 1
chr17:7315980|7316156 hsa-miR-1244 0 0 1
chr17:7315980|7316156 hsa-miR-338-3p 0 0 1
chr17:7315980|7316156 hsa-miR-218 0 0 1
chr17:7315980|7316156 hsa-miR-346 0 1 0
chr17:7315980|7316156 hsa-miR-638 1 0 0
chr17:7315980|7316156 hsa-miR-761 0 1 0
chr17:7315980|7316156 hsa-miR-940 1 0 0
chr17:7315980|7316156 hsa-miR-663b 1 1 0
chr17:7315980|7316156 hsa-miR-1539 0 1 0
chr17:7315980|7316156 hsa-miR-4467 1 0 0
chr17:7315980|7316156 hsa-miR-4530 0 1 0
chr17:7315980|7316156 hsa-miR-4681 0 1 0
chr17:7315980|7316156 hsa-miR-4688 1 0 0
chr17:7315980|7316156 hsa-miR-4741 1 0 0
chr17:7315980|7316156 hsa-miR-6081 1 0 0
chr17:7315980|7316156 hsa-miR-6134 0 1 0
chr17:7315980|7316156 hsa-miR-12114 0 1 0
chr17:7315980|7316156 hsa-miR-12121 0 1 0
chr17:7315980|7316156 hsa-miR-6765-5p 1 0 0
chr17:7315980|7316156 hsa-miR-205-5p 0 1 0
chr17:7315980|7316156 hsa-miR-6510-5p 0 1 0
chr17:7315980|7316156 hsa-miR-6880-5p 0 1 0
chr17:7315980|7316156 hsa-miR-4695-5p 1 0 0
chr17:7315980|7316156 hsa-miR-6716-5p 0 1 0
chr17:7315980|7316156 hsa-miR-6788-3p 0 1 0
chr17:7315980|7316156 hsa-miR-6772-3p 0 1 0
chr17:7315980|7316156 hsa-miR-4763-5p 0 1 0
chr17:7315980|7316156 hsa-miR-1908-3p 1 0 0
chr17:7315980|7316156 hsa-miR-6804-3p 0 1 0
chr17:7315980|7316156 hsa-miR-6758-3p 0 1 0
chr17:7315980|7316156 hsa-miR-2277-5p 1 0 0
chr17:7315980|7316156 hsa-miR-6802-3p 0 1 0
chr17:7315980|7316156 hsa-miR-10400-5p 1 0 0
chr17:7315980|7316156 hsa-miR-6775-5p 0 1 0
chr17:7315980|7316156 hsa-miR-6743-5p 1 0 0
chr17:7315980|7316156 hsa-miR-6819-5p 1 0 0
chr17:7315980|7316156 hsa-miR-1249-5p 1 0 0
chr17:7315980|7316156 hsa-miR-328-5p 1 0 0
chr17:7315980|7316156 hsa-miR-449c-5p 1 0 0
chr17:7315980|7316156 hsa-miR-6848-5p 1 0 0
chr17:7315980|7316156 hsa-miR-34b-5p 0 1 0
chr17:7315980|7316156 hsa-miR-6724-5p 1 1 0
chr17:7315980|7316156 hsa-miR-6784-3p 0 1 0
chr17:7315980|7316156 hsa-miR-6862-3p 0 1 0
chr17:7315980|7316156 hsa-miR-10392-3p 1 0 0
chr17:7315980|7316156 hsa-miR-483-3p 0 1 0
chr17:7315980|7316156 hsa-miR-1234-3p 1 0 0
chr17:7315980|7316156 hsa-miR-2682-5p 1 1 0
chr17:7315980|7316156 hsa-miR-6737-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:7315980|7316156
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MCPAGTGGMRGETPLLQAQSGRGPMDSEWRLPPPHSRDSWHAQVLELGSRAGACRQA
Nucleotide Sequence CTGTGCCCTGCTGGTACGGGTGGAATGAGGGGTGAGACACCACTACTACAAGCACAGTCGGGCCGCGGGCCCATGGACTCTGAGTGGCGACTGCCTCCACCTCATTCCCGTGACTCGTGGCATGCGCAGGTGCTGGAGCTTGGCAGCCGCGCAGGAGCATGTAGGCAGGCT

CircID chr17:7315980|7316156
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MSGDCLHLIPVTRGMRRCWSLAAAQEHVGR
Nucleotide Sequence CTGAGTGGCGACTGCCTCCACCTCATTCCCGTGACTCGTGGCATGCGCAGGTGCTGGAGCTTGGCAGCCGCGCAGGAGCATGTAGGCAGG

CircID chr17:7315980|7316156
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MPTCSCAAAKLQHLRMPRVTGMRWRQSPLRVHGPAARLCL
Nucleotide Sequence CTGCCTACATGCTCCTGCGCGGCTGCCAAGCTCCAGCACCTGCGCATGCCACGAGTCACGGGAATGAGGTGGAGGCAGTCGCCACTCAGAGTCCATGGGCCCGCGGCCCGACTGTGCTTGTAG

CircID chr17:7315980|7316156
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MGPRPDCACSSGVSPLIPPVPAGHRG
Nucleotide Sequence ATGGGCCCGCGGCCCGACTGTGCTTGTAGTAGTGGTGTCTCACCCCTCATTCCACCCGTACCAGCAGGGCACAGAGGA

CircID chr17:7315980|7316156
ORF Type ORF5
Protein Length 55
Nucleotide Length 165
Protein Sequence MLLRGCQAPAPAHATSHGNEVEAVATQSPWARGPTVLVVVVSHPSFHPYQQGTEE
Nucleotide Sequence ATGCTCCTGCGCGGCTGCCAAGCTCCAGCACCTGCGCATGCCACGAGTCACGGGAATGAGGTGGAGGCAGTCGCCACTCAGAGTCCATGGGCCCGCGGCCCGACTGTGCTTGTAGTAGTGGTGTCTCACCCCTCATTCCACCCGTACCAGCAGGGCACAGAGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites