CircRNA Information

General Information
circRNA Basic Information
CircID chr17:73207433|73207599
Strand +
CircType exon
Host Gene ENSG00000166685.10;
Algorism CIRI2;
Sequence CAGAACAAAACAGATTTTCTCCAAACAAGTACAATGATAGTGCCGGGTTGGCAGTTAACTCTTTCACCCTACTAAATTCAAGAGCTCATCTCCACCCTGTCCTGTATATTTTCTACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:73207433|73207599 hsa-miR-143-5p 0 0 1
chr17:73207433|73207599 hsa-miR-143-3p 0 0 1
chr17:73207433|73207599 hsa-miR-375-5p 0 0 1
chr17:73207433|73207599 hsa-miR-375-3p 0 0 1
chr17:73207433|73207599 hsa-miR-562 0 0 1
chr17:73207433|73207599 hsa-miR-620 0 0 1
chr17:73207433|73207599 hsa-miR-633 0 0 1
chr17:73207433|73207599 hsa-miR-1270 0 0 1
chr17:73207433|73207599 hsa-miR-941 0 1 1
chr17:73207433|73207599 hsa-miR-556-5p 0 1 1
chr17:73207433|73207599 hsa-miR-768-5p 0 0 1
chr17:73207433|73207599 hsa-miR-206 1 1 0
chr17:73207433|73207599 hsa-miR-608 1 0 0
chr17:73207433|73207599 hsa-miR-612 1 0 0
chr17:73207433|73207599 hsa-miR-762 1 0 0
chr17:73207433|73207599 hsa-miR-1286 1 0 0
chr17:73207433|73207599 hsa-miR-3132 1 0 0
chr17:73207433|73207599 hsa-miR-4424 0 1 0
chr17:73207433|73207599 hsa-miR-4436a 1 1 0
chr17:73207433|73207599 hsa-miR-4651 1 0 0
chr17:73207433|73207599 hsa-miR-4739 1 0 0
chr17:73207433|73207599 hsa-miR-5697 0 1 0
chr17:73207433|73207599 hsa-miR-6745 0 1 0
chr17:73207433|73207599 hsa-miR-6860 1 0 0
chr17:73207433|73207599 hsa-miR-7150 1 0 0
chr17:73207433|73207599 hsa-miR-12114 1 0 0
chr17:73207433|73207599 hsa-miR-7106-5p 1 0 0
chr17:73207433|73207599 hsa-miR-8071 1 0 0
chr17:73207433|73207599 hsa-miR-6833-5p 1 0 0
chr17:73207433|73207599 hsa-miR-6721-5p 1 0 0
chr17:73207433|73207599 hsa-miR-197-5p 1 0 0
chr17:73207433|73207599 hsa-miR-7845-5p 1 0 0
chr17:73207433|73207599 hsa-miR-6742-5p 1 0 0
chr17:73207433|73207599 hsa-miR-6796-5p 1 0 0
chr17:73207433|73207599 hsa-miR-3190-3p 0 1 0
chr17:73207433|73207599 hsa-miR-6782-5p 1 0 0
chr17:73207433|73207599 hsa-miR-1229-5p 1 0 0
chr17:73207433|73207599 hsa-miR-30c-2-3p 1 0 0
chr17:73207433|73207599 hsa-miR-6730-3p 0 1 0
chr17:73207433|73207599 hsa-miR-6792-5p 1 0 0
chr17:73207433|73207599 hsa-miR-1207-5p 1 0 0
chr17:73207433|73207599 hsa-miR-4763-3p 1 0 0
chr17:73207433|73207599 hsa-miR-6756-5p 1 0 0
chr17:73207433|73207599 hsa-miR-6851-5p 1 0 0
chr17:73207433|73207599 hsa-miR-6879-5p 1 0 0
chr17:73207433|73207599 hsa-miR-4632-5p 1 1 0
chr17:73207433|73207599 hsa-miR-4745-5p 1 0 0
chr17:73207433|73207599 hsa-miR-7151-3p 1 0 0
chr17:73207433|73207599 hsa-miR-1185-1-3p 1 0 0
chr17:73207433|73207599 hsa-miR-1185-2-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:73207433|73207599
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MAVNSFTLLNSRAHLHPVLYIFYISIKRLLGSVSGHLLHL
Nucleotide Sequence TTGGCAGTTAACTCTTTCACCCTACTAAATTCAAGAGCTCATCTCCACCCTGTCCTGTATATTTTCTACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites