CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7321560|7321787
Strand -
CircType Non-Repeat
Host Gene ENSG00000215041.9;
Algorism find_circ;CIRI2;DCC;
Sequence GTGAAAGTGGAAGAGCTAGATGAGAAGTGGGCAGGTTCCCTGCGGCTGGGGCTGACCACACTAGCACCGGGGGAGATGGGACCCGGGGCAGGCGGTGGTGGCCCAGGGCTGCCTCCTTCCCTGCCAGAGCTCCGGACGAAGACCACTTGGATGGTATCCAGCTGTGAAGTGAGGCGTGATGGGCAGCTCCAGAGGATGAACTATGGCCGGAACCTAGAGAGGCTGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr17:7321560|7321787
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MGPGAGGGGPGLPPSLPELRTKTTWMVSSCEVRRDGQLQRMNYGRNLERLG
Nucleotide Sequence ATGGGACCCGGGGCAGGCGGTGGTGGCCCAGGGCTGCCTCCTTCCCTGCCAGAGCTCCGGACGAAGACCACTTGGATGGTATCCAGCTGTGAAGTGAGGCGTGATGGGCAGCTCCAGAGGATGAACTATGGCCGGAACCTAGAGAGGCTGGGG

CircID chr17:7321560|7321787
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence VPAIVHPLELPITPHFTAGYHPSGLRPELWQGRRQPWATTACPGSHLPRC*
Nucleotide Sequence GTTCCGGCCATAGTTCATCCTCTGGAGCTGCCCATCACGCCTCACTTCACAGCTGGATACCATCCAAGTGGTCTTCGTCCGGAGCTCTGGCAGGGAAGGAGGCAGCCCTGGGCCACCACCGCCTGCCCCGGGTCCCATCTCCCCCGGTGCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr17:7321560|7321787 MOV10 1 0 0
chr17:7321560|7321787 NCBP3 1 0 0
chr17:7321560|7321787 PRPF8 4 13 2
chr17:7321560|7321787 NUDT21 11 3 0
chr17:7321560|7321787 RBM15B 4 14 0
chr17:7321560|7321787 TROVE2 0 4 1
chr17:7321560|7321787 GNL3 1 1 0
chr17:7321560|7321787 DGCR8 1 6 1
chr17:7321560|7321787 EIF3A 1 0 0
chr17:7321560|7321787 ZRANB2 0 5 0
chr17:7321560|7321787 EIF3G 1 0 0
chr17:7321560|7321787 GRWD1 0 5 0
chr17:7321560|7321787 PTBP1 11 4 0
chr17:7321560|7321787 NOL12 0 4 0
chr17:7321560|7321787 LARP4 2 0 0
chr17:7321560|7321787 ACIN1 0 1 0
chr17:7321560|7321787 RANGAP1 0 4 0
chr17:7321560|7321787 FXR1 0 2 0
chr17:7321560|7321787 FXR2 0 5 1
chr17:7321560|7321787 DICER1 0 1 0
chr17:7321560|7321787 GTF2F1 0 1 0
chr17:7321560|7321787 SLTM 0 2 1
chr17:7321560|7321787 DDX42 1 1 0
chr17:7321560|7321787 CSTF2T 8 5 1
chr17:7321560|7321787 DDX3X 29 19 0
chr17:7321560|7321787 RNF219 0 1 1
chr17:7321560|7321787 TIAL1 12 2 0
chr17:7321560|7321787 CSTF2 6 3 0
chr17:7321560|7321787 UPF1 7 0 0
chr17:7321560|7321787 YBX3 4 0 0
chr17:7321560|7321787 ELAVL1 16 2 3
chr17:7321560|7321787 TBRG4 0 1 0
chr17:7321560|7321787 YTHDF1 8 1 0
chr17:7321560|7321787 SRSF7 0 1 1
chr17:7321560|7321787 SRSF1 11 17 3
chr17:7321560|7321787 SUB1 2 3 0
chr17:7321560|7321787 U2AF1 1 1 0
chr17:7321560|7321787 U2AF2 10 21 0
chr17:7321560|7321787 SRSF9 2 6 0
chr17:7321560|7321787 DDX54 1 10 4
chr17:7321560|7321787 DDX55 2 8 1
chr17:7321560|7321787 EFTUD2 0 10 0
chr17:7321560|7321787 PCBP2 0 1 0
chr17:7321560|7321787 SF3A3 0 7 1
chr17:7321560|7321787 ZNF184 3 3 0
chr17:7321560|7321787 XRN2 0 2 0
chr17:7321560|7321787 LIN28B 8 6 1
chr17:7321560|7321787 FTO 1 0 0
chr17:7321560|7321787 RBFOX2 1 2 0
chr17:7321560|7321787 WDR33 2 0 0
chr17:7321560|7321787 HNRNPK 1 0 0
chr17:7321560|7321787 AIFM1 0 1 0
chr17:7321560|7321787 AGO1 1 0 0
chr17:7321560|7321787 EIF4A3 6 16 3
chr17:7321560|7321787 AGO2 0 3 1
chr17:7321560|7321787 UCHL5 0 3 0
chr17:7321560|7321787 FAM120A 0 4 0
chr17:7321560|7321787 CNBP 0 1 0
chr17:7321560|7321787 RPS5 0 2 0
chr17:7321560|7321787 RPS3 1 7 1
chr17:7321560|7321787 TAF15 2 0 0
chr17:7321560|7321787 FUS 1 2 2
chr17:7321560|7321787 DROSHA 1 0 0
chr17:7321560|7321787 HNRNPU 0 1 0
chr17:7321560|7321787 ZNF622 0 1 0
chr17:7321560|7321787 RBM10 8 7 0
chr17:7321560|7321787 RBM15 3 3 0
chr17:7321560|7321787 HNRNPC 73 14 7
chr17:7321560|7321787 SMNDC1 0 8 1
chr17:7321560|7321787 AUH 0 2 0
chr17:7321560|7321787 HNRNPA1 1 0 0
chr17:7321560|7321787 SND1 2 1 1
chr17:7321560|7321787 IGF2BP1 0 1 0
chr17:7321560|7321787 IGF2BP3 2 1 0
chr17:7321560|7321787 IGF2BP2 3 3 2
chr17:7321560|7321787 TARDBP 1 0 0
chr17:7321560|7321787 YTHDC1 8 9 0
chr17:7321560|7321787 YTHDC2 1 0 0
chr17:7321560|7321787 BUD13 1 13 1
chr17:7321560|7321787 RTCB 0 1 0
chr17:7321560|7321787 PPIG 0 30 0
chr17:7321560|7321787 FBL 3 7 3
chr17:7321560|7321787 RBM5 0 2 0
chr17:7321560|7321787 NUMA1 0 2 0
chr17:7321560|7321787 GRSF1 0 1 0
chr17:7321560|7321787 SF3B4 0 9 4
chr17:7321560|7321787 CPSF7 7 3 0
chr17:7321560|7321787 FMR1 3 10 4
chr17:7321560|7321787 CPSF6 7 3 0
chr17:7321560|7321787 CPSF4 1 0 0
chr17:7321560|7321787 CPSF1 3 0 0
chr17:7321560|7321787 NOP58 4 4 2
chr17:7321560|7321787 LSM11 3 17 3
chr17:7321560|7321787 HNRNPA2B1 1 3 0
chr17:7321560|7321787 FIP1L1 5 1 0
chr17:7321560|7321787 TRA2A 1 3 1
chr17:7321560|7321787 DDX24 0 17 1
chr17:7321560|7321787 ATXN2 14 6 1
chr17:7321560|7321787 SRRM4 2 2 0
chr17:7321560|7321787 TIA1 6 1 0
chr17:7321560|7321787 TARBP2 0 1 0
chr17:7321560|7321787 EWSR1 1 1 0