CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7460671|7460913
Strand +
CircType exon
Host Gene ENSG00000174282.10;
Algorism CIRI2;
Sequence CTGTATTCCCATCTCCCCAGTGTCACTCCCCTCACCAATCACTCCAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGTGGGCTTTGGGGTATCCCCACCAACTTTCCCTTCAAAATAGCACCTTACACCCCATCTTTGACTCAGTTCCCCACACCCAAAGATCCCAGCCTAGGGATGGGGTACAGGGACTTTAAATAGTCCCTAATCCCTAATTTGCACTAGTTAACCCTGGTCAGGGTCC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7460671|7460913 hsa-miR-18a-5p 0 0 1
chr17:7460671|7460913 hsa-miR-18a-3p 0 0 1
chr17:7460671|7460913 hsa-miR-19a-5p 0 0 1
chr17:7460671|7460913 hsa-miR-19a-3p 0 0 1
chr17:7460671|7460913 hsa-miR-122-5p 0 0 1
chr17:7460671|7460913 hsa-miR-122-3p 0 0 1
chr17:7460671|7460913 hsa-miR-130a-5p 0 0 1
chr17:7460671|7460913 hsa-miR-130a-3p 0 0 1
chr17:7460671|7460913 hsa-miR-301a-5p 0 0 1
chr17:7460671|7460913 hsa-miR-301a-3p 0 0 1
chr17:7460671|7460913 hsa-miR-130b-5p 0 0 1
chr17:7460671|7460913 hsa-miR-130b-3p 0 0 1
chr17:7460671|7460913 hsa-miR-18b-5p 0 0 1
chr17:7460671|7460913 hsa-miR-18b-3p 0 0 1
chr17:7460671|7460913 hsa-miR-504-5p 0 0 1
chr17:7460671|7460913 hsa-miR-504-3p 0 0 1
chr17:7460671|7460913 hsa-miR-608 1 0 1
chr17:7460671|7460913 hsa-miR-609 0 0 1
chr17:7460671|7460913 hsa-miR-638 1 0 1
chr17:7460671|7460913 hsa-miR-645 0 0 1
chr17:7460671|7460913 hsa-miR-454-5p 0 0 1
chr17:7460671|7460913 hsa-miR-454-3p 0 0 1
chr17:7460671|7460913 hsa-miR-541-5p 0 0 1
chr17:7460671|7460913 hsa-miR-541-3p 0 0 1
chr17:7460671|7460913 hsa-miR-301b-5p 0 0 1
chr17:7460671|7460913 hsa-miR-301b-3p 0 0 1
chr17:7460671|7460913 hsa-miR-939-5p 0 0 1
chr17:7460671|7460913 hsa-miR-939-3p 0 0 1
chr17:7460671|7460913 hsa-miR-1262 0 0 1
chr17:7460671|7460913 hsa-miR-486-5p 0 0 1
chr17:7460671|7460913 hsa-miR-491-5p 1 0 1
chr17:7460671|7460913 hsa-miR-339-5p 0 0 1
chr17:7460671|7460913 hsa-miR-423-5p 0 0 1
chr17:7460671|7460913 hsa-miR-654-5p 0 0 1
chr17:7460671|7460913 hsa-miR-361-3p 0 0 1
chr17:7460671|7460913 hsa-miR-509-3p 0 0 1
chr17:7460671|7460913 hsa-miR-342-5p 0 0 1
chr17:7460671|7460913 hsa-miR-769-3p 1 0 1
chr17:7460671|7460913 hsa-miR-450b-3p 0 0 1
chr17:7460671|7460913 hsa-miR-1274a 0 0 1
chr17:7460671|7460913 hsa-miR-1274b 0 0 1
chr17:7460671|7460913 hsa-miR-9 0 0 1
chr17:7460671|7460913 hsa-miR-19b 0 0 1
chr17:7460671|7460913 hsa-miR-516b 0 0 1
chr17:7460671|7460913 hsa-miR-762 1 0 0
chr17:7460671|7460913 hsa-miR-760 1 0 0
chr17:7460671|7460913 hsa-miR-1182 1 0 0
chr17:7460671|7460913 hsa-miR-1299 1 0 0
chr17:7460671|7460913 hsa-miR-1268a 1 0 0
chr17:7460671|7460913 hsa-miR-4271 1 0 0
chr17:7460671|7460913 hsa-miR-3652 1 0 0
chr17:7460671|7460913 hsa-miR-3907 1 0 0
chr17:7460671|7460913 hsa-miR-3936 1 0 0
chr17:7460671|7460913 hsa-miR-1268b 1 0 0
chr17:7460671|7460913 hsa-miR-4505 1 0 0
chr17:7460671|7460913 hsa-miR-2392 1 0 0
chr17:7460671|7460913 hsa-miR-1587 1 0 0
chr17:7460671|7460913 hsa-miR-4651 1 0 0
chr17:7460671|7460913 hsa-miR-4689 1 0 0
chr17:7460671|7460913 hsa-miR-5194 1 0 0
chr17:7460671|7460913 hsa-miR-5572 1 0 0
chr17:7460671|7460913 hsa-miR-5698 1 0 0
chr17:7460671|7460913 hsa-miR-5787 1 0 0
chr17:7460671|7460913 hsa-miR-7515 1 0 0
chr17:7460671|7460913 hsa-miR-8089 1 0 0
chr17:7460671|7460913 hsa-miR-12119 1 0 0
chr17:7460671|7460913 hsa-miR-92a-1-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6734-5p 1 0 0
chr17:7460671|7460913 hsa-miR-7155-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6747-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4433a-3p 1 0 0
chr17:7460671|7460913 hsa-miR-6857-5p 1 0 0
chr17:7460671|7460913 hsa-miR-1236-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6890-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6741-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6772-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6786-5p 1 0 0
chr17:7460671|7460913 hsa-miR-7109-5p 1 0 0
chr17:7460671|7460913 hsa-miR-1226-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4640-5p 1 0 0
chr17:7460671|7460913 hsa-miR-1228-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6823-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4713-3p 1 0 0
chr17:7460671|7460913 hsa-miR-937-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6802-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6864-5p 1 0 0
chr17:7460671|7460913 hsa-miR-1207-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6769b-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6812-5p 1 0 0
chr17:7460671|7460913 hsa-miR-1343-5p 1 0 0
chr17:7460671|7460913 hsa-miR-5001-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6726-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6752-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6756-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6803-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6819-5p 1 0 0
chr17:7460671|7460913 hsa-miR-7110-5p 1 0 0
chr17:7460671|7460913 hsa-miR-10401-5p 1 0 0
chr17:7460671|7460913 hsa-miR-1249-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6722-3p 1 0 0
chr17:7460671|7460913 hsa-miR-6763-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6797-5p 1 0 0
chr17:7460671|7460913 hsa-miR-3620-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4685-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4701-3p 1 0 0
chr17:7460671|7460913 hsa-miR-4725-3p 1 0 0
chr17:7460671|7460913 hsa-miR-6738-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6777-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6794-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6795-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6846-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6887-5p 1 0 0
chr17:7460671|7460913 hsa-miR-6889-5p 1 0 0
chr17:7460671|7460913 hsa-miR-3085-5p 1 0 0
chr17:7460671|7460913 hsa-miR-3198 1 0 0
chr17:7460671|7460913 hsa-miR-1914-3p 1 0 0
chr17:7460671|7460913 hsa-miR-6855-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4646-5p 1 0 0
chr17:7460671|7460913 hsa-miR-4472 1 0 0
chr17:7460671|7460913 hsa-miR-6791-5p 1 0 0
chr17:7460671|7460913 hsa-miR-5581-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7460671|7460913
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence LYSHLPSVTPLTNHSRWFWGNHSTLLVGFGVSPPTFPSK
Nucleotide Sequence CTGTATTCCCATCTCCCCAGTGTCACTCCCCTCACCAATCACTCCAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGTGGGCTTTGGGGTATCCCCACCAACTTTCCCTTCAAAATAG
CircID chr17:7460671|7460913
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MGYPHQLSLQNSTLHPIFDSVPHTQRSQPRDGVQGL
Nucleotide Sequence TTGGGGTATCCCCACCAACTTTCCCTTCAAAATAGCACCTTACACCCCATCTTTGACTCAGTTCCCCACACCCAAAGATCCCAGCCTAGGGATGGGGTACAGGGACTTTAA
CircID chr17:7460671|7460913
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MVLGEPFYSSGGLWGIPTNFPFKIAPYTPSLTQFPTPKDPSLGMGYRDFK
Nucleotide Sequence ATGGTTTTGGGGGAACCATTCTACTCTTCTGGTGGGCTTTGGGGTATCCCCACCAACTTTCCCTTCAAAATAGCACCTTACACCCCATCTTTGACTCAGTTCCCCACACCCAAAGATCCCAGCCTAGGGATGGGGTACAGGGACTTTAAATAG
CircID chr17:7460671|7460913
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MSQRWGVRCYFEGKVGGDTPKPTRRVEWFPQNHLE
Nucleotide Sequence CTGAGTCAAAGATGGGGTGTAAGGTGCTATTTTGAAGGGAAAGTTGGTGGGGATACCCCAAAGCCCACCAGAAGAGTAGAATGGTTCCCCCAAAACCATCTGGAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab