CircRNA Information

General Information
circRNA Basic Information
CircID chr17:74771322|74771612
Strand +
CircType exon
Host Gene ENSG00000109065.10;
Algorism CIRI2;
Sequence CTTTCGAGGCCCTTCAGACTCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTCTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGCTGGAGGTGCAGGGGGACCTGGAACATGGATGGGAGTGGACAGGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGGCTGGGAGTGAAGCTCCAGGCACTACCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:74771322|74771612 hsa-miR-205-5p 0 0 1
chr17:74771322|74771612 hsa-miR-205-3p 0 0 1
chr17:74771322|74771612 hsa-miR-136-5p 0 0 1
chr17:74771322|74771612 hsa-miR-136-3p 0 0 1
chr17:74771322|74771612 hsa-miR-150-5p 0 0 1
chr17:74771322|74771612 hsa-miR-150-3p 0 0 1
chr17:74771322|74771612 hsa-miR-328-5p 0 0 1
chr17:74771322|74771612 hsa-miR-328-3p 0 0 1
chr17:74771322|74771612 hsa-miR-384 0 0 1
chr17:74771322|74771612 hsa-miR-193b-5p 0 0 1
chr17:74771322|74771612 hsa-miR-193b-3p 0 0 1
chr17:74771322|74771612 hsa-miR-519e-5p 0 0 1
chr17:74771322|74771612 hsa-miR-519e-3p 0 0 1
chr17:74771322|74771612 hsa-miR-629-5p 0 0 1
chr17:74771322|74771612 hsa-miR-629-3p 0 0 1
chr17:74771322|74771612 hsa-miR-661 1 0 1
chr17:74771322|74771612 hsa-miR-766-5p 0 0 1
chr17:74771322|74771612 hsa-miR-766-3p 0 0 1
chr17:74771322|74771612 hsa-miR-1291 0 0 1
chr17:74771322|74771612 hsa-miR-1321 0 0 1
chr17:74771322|74771612 hsa-miR-532-3p 1 0 1
chr17:74771322|74771612 hsa-miR-193a-5p 0 0 1
chr17:74771322|74771612 hsa-miR-1289 0 0 1
chr17:74771322|74771612 hsa-miR-1224-3p 1 0 1
chr17:74771322|74771612 hsa-miR-490-5p 0 1 1
chr17:74771322|74771612 hsa-miR-767-3p 0 1 1
chr17:74771322|74771612 hsa-miR-483-3p 0 0 1
chr17:74771322|74771612 hsa-miR-515-3p 0 0 1
chr17:74771322|74771612 hsa-miR-193a-3p 0 0 1
chr17:74771322|74771612 hsa-miR-516a-3p 0 0 1
chr17:74771322|74771612 hsa-miR-1260 0 0 1
chr17:74771322|74771612 hsa-miR-1280 0 0 1
chr17:74771322|74771612 hsa-miR-550 0 0 1
chr17:74771322|74771612 hsa-miR-1254 0 0 1
chr17:74771322|74771612 hsa-miR-371-3p 0 0 1
chr17:74771322|74771612 hsa-miR-133b 1 0 0
chr17:74771322|74771612 hsa-miR-612 1 0 0
chr17:74771322|74771612 hsa-miR-760 1 0 0
chr17:74771322|74771612 hsa-miR-1182 0 1 0
chr17:74771322|74771612 hsa-miR-1260a 1 0 0
chr17:74771322|74771612 hsa-miR-1539 1 0 0
chr17:74771322|74771612 hsa-miR-1976 1 0 0
chr17:74771322|74771612 hsa-miR-3154 0 1 0
chr17:74771322|74771612 hsa-miR-1260b 1 0 0
chr17:74771322|74771612 hsa-miR-4308 0 1 0
chr17:74771322|74771612 hsa-miR-4254 0 1 0
chr17:74771322|74771612 hsa-miR-4290 0 1 0
chr17:74771322|74771612 hsa-miR-3943 1 0 0
chr17:74771322|74771612 hsa-miR-3135b 0 1 0
chr17:74771322|74771612 hsa-miR-4493 0 1 0
chr17:74771322|74771612 hsa-miR-4516 0 1 0
chr17:74771322|74771612 hsa-miR-4521 0 1 0
chr17:74771322|74771612 hsa-miR-4706 1 0 0
chr17:74771322|74771612 hsa-miR-4739 1 1 0
chr17:74771322|74771612 hsa-miR-7977 0 1 0
chr17:74771322|74771612 hsa-miR-8085 0 1 0
chr17:74771322|74771612 hsa-miR-214-5p 1 1 0
chr17:74771322|74771612 hsa-miR-18a-3p 0 1 0
chr17:74771322|74771612 hsa-miR-6734-5p 0 1 0
chr17:74771322|74771612 hsa-miR-3157-5p 0 1 0
chr17:74771322|74771612 hsa-miR-212-5p 0 1 0
chr17:74771322|74771612 hsa-miR-210-5p 1 0 0
chr17:74771322|74771612 hsa-miR-486-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6515-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6746-5p 1 1 0
chr17:74771322|74771612 hsa-miR-4755-3p 1 0 0
chr17:74771322|74771612 hsa-miR-145-5p 1 0 0
chr17:74771322|74771612 hsa-miR-874-3p 1 0 0
chr17:74771322|74771612 hsa-miR-4728-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6841-3p 1 1 0
chr17:74771322|74771612 hsa-miR-6783-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6796-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6874-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6735-3p 1 1 0
chr17:74771322|74771612 hsa-miR-4713-5p 1 0 0
chr17:74771322|74771612 hsa-miR-4436b-5p 1 0 0
chr17:74771322|74771612 hsa-miR-3934-3p 1 0 0
chr17:74771322|74771612 hsa-miR-939-3p 1 0 0
chr17:74771322|74771612 hsa-miR-7109-5p 1 0 0
chr17:74771322|74771612 hsa-miR-4763-5p 1 0 0
chr17:74771322|74771612 hsa-miR-1247-5p 1 0 0
chr17:74771322|74771612 hsa-miR-4640-5p 1 0 0
chr17:74771322|74771612 hsa-miR-30c-2-3p 1 0 0
chr17:74771322|74771612 hsa-miR-7113-3p 1 1 0
chr17:74771322|74771612 hsa-miR-4667-3p 1 0 0
chr17:74771322|74771612 hsa-miR-149-3p 0 1 0
chr17:74771322|74771612 hsa-miR-6736-3p 1 1 0
chr17:74771322|74771612 hsa-miR-4640-3p 1 0 0
chr17:74771322|74771612 hsa-miR-1306-5p 1 1 0
chr17:74771322|74771612 hsa-miR-339-5p 1 1 0
chr17:74771322|74771612 hsa-miR-7112-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6870-3p 0 1 0
chr17:74771322|74771612 hsa-miR-3120-3p 0 1 0
chr17:74771322|74771612 hsa-miR-2115-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6811-3p 1 0 0
chr17:74771322|74771612 hsa-miR-7106-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6804-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6887-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6752-3p 1 1 0
chr17:74771322|74771612 hsa-miR-4749-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6880-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6768-3p 1 1 0
chr17:74771322|74771612 hsa-miR-331-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6748-3p 0 1 0
chr17:74771322|74771612 hsa-miR-449b-3p 0 1 0
chr17:74771322|74771612 hsa-miR-3620-3p 1 0 0
chr17:74771322|74771612 hsa-miR-4433a-5p 1 0 0
chr17:74771322|74771612 hsa-miR-1229-3p 1 0 0
chr17:74771322|74771612 hsa-miR-4717-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6779-3p 1 1 0
chr17:74771322|74771612 hsa-miR-2116-3p 0 1 0
chr17:74771322|74771612 hsa-miR-5007-5p 0 1 0
chr17:74771322|74771612 hsa-miR-133a-3p 1 0 0
chr17:74771322|74771612 hsa-miR-4716-5p 0 1 0
chr17:74771322|74771612 hsa-miR-1207-5p 1 0 0
chr17:74771322|74771612 hsa-miR-1233-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6775-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6726-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6813-5p 1 0 0
chr17:74771322|74771612 hsa-miR-1249-5p 1 1 0
chr17:74771322|74771612 hsa-miR-7111-5p 0 1 0
chr17:74771322|74771612 hsa-miR-4728-5p 1 1 0
chr17:74771322|74771612 hsa-miR-4632-5p 0 1 0
chr17:74771322|74771612 hsa-miR-939-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6799-3p 1 0 0
chr17:74771322|74771612 hsa-miR-10398-5p 1 0 0
chr17:74771322|74771612 hsa-miR-6753-3p 1 0 0
chr17:74771322|74771612 hsa-miR-7107-3p 1 1 0
chr17:74771322|74771612 hsa-miR-6822-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6893-3p 1 0 0
chr17:74771322|74771612 hsa-miR-6810-3p 1 1 0
chr17:74771322|74771612 hsa-miR-6837-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6775-3p 0 1 0
chr17:74771322|74771612 hsa-miR-4756-5p 0 1 0
chr17:74771322|74771612 hsa-miR-6744-3p 1 0 0
chr17:74771322|74771612 hsa-miR-4661-5p 1 0 0
chr17:74771322|74771612 hsa-miR-498-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:74771322|74771612
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MEWRAGIHGRCRDEGGSWRCRGTWNMDGSGQAFLLRGQRCCPGWE
Nucleotide Sequence CTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGCTGGAGGTGCAGGGGGACCTGGAACATGGATGGGAGTGGACAGGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGGCTGGGAGTGA
CircID chr17:74771322|74771612
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MGDVGMKVGAGGAGGPGTWMGVDRPFSLEARGAALAGSEAPGTT
Nucleotide Sequence ATGGGAGATGTCGGGATGAAGGTGGGAGCTGGAGGTGCAGGGGGACCTGGAACATGGATGGGAGTGGACAGGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGGCTGGGAGTGAAGCTCCAGGCACTACC
CircID chr17:74771322|74771612
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MAGLAVASLQLVVWLSRLQGQGQFPSPLPAKPRPRL
Nucleotide Sequence CTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTCTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAG
CircID chr17:74771322|74771612
ORF Type ORF4
Protein Length 97
Nucleotide Length 291
Protein Sequence LVVPGASLPARAAPLASKEKGLSTPIHVPGPPAPPAPTFIPTSPMDPCPPFQLPRVWVWVWPGGEKGTGPGPGVCSATPLAGGRPQQAPPESEGPRK
Nucleotide Sequence CTGGTAGTGCCTGGAGCTTCACTCCCAGCCAGGGCAGCACCTCTGGCCTCTAAGGAGAAAGGCCTGTCCACTCCCATCCATGTTCCAGGTCCCCCTGCACCTCCAGCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCTGGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAGTCTGAAGGGCCTCGAAAG
CircID chr17:74771322|74771612
ORF Type ORF5
Protein Length 76
Nucleotide Length 231
Protein Sequence MELHSQPGQHLWPLRRKACPLPSMFQVPLHLQLPPSSRHLPWIPALHSSFLESGSGFGREGRRELALALESAQPHH
Nucleotide Sequence CTGGAGCTTCACTCCCAGCCAGGGCAGCACCTCTGGCCTCTAAGGAGAAAGGCCTGTCCACTCCCATCCATGTTCCAGGTCCCCCTGCACCTCCAGCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCTGGCCCTGGAGTCTGCTCAGCCACACCACTAG
CircID chr17:74771322|74771612
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MGLGLAGRGEGNWPWPWSLLSHTTSWREATASPARV
Nucleotide Sequence CTGGGTCTGGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCTGGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab