CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75004562|75004898
Strand -
CircType exon
Host Gene ENSG00000109089.7;
Algorism CIRI2;
Sequence CCACTGCTTCTCCCCAACCCTGATGCGCTGACATTCCCTTAGCACCAGCTGTCCCACCTCCAGGGTCCTGACCAGGTCAGAGATGTCCCCTGCCATGCAGAGCAGGAAGCCTCAGCTGGGCCTGGAGTGTCCCTGCTCCAGCCCTGCCAGGGACAGGTTTCTCCCTGGATACTCTTGGCCCACCGCAGATCTGTAGCCAGTCAGAGGAGGAGGAGAAGGAGCCCCTCAGCAGAGTGGTGCAGTTTCGCTCAGAGCTTGTCTCCTTGGCTTCCAACCCCAGAAATGCCTGCTGGGCCTTAAGCTTTCCAGGGGCCGGGGCAGTGGGGAGCCCCCATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75004562|75004898 hsa-miR-214-5p 0 0 1
chr17:75004562|75004898 hsa-miR-214-3p 0 0 1
chr17:75004562|75004898 hsa-miR-206 0 0 1
chr17:75004562|75004898 hsa-miR-370-5p 0 0 1
chr17:75004562|75004898 hsa-miR-370-3p 0 0 1
chr17:75004562|75004898 hsa-miR-345-5p 0 0 1
chr17:75004562|75004898 hsa-miR-345-3p 0 0 1
chr17:75004562|75004898 hsa-miR-504-5p 0 0 1
chr17:75004562|75004898 hsa-miR-504-3p 0 0 1
chr17:75004562|75004898 hsa-miR-613 0 0 1
chr17:75004562|75004898 hsa-miR-631 0 1 1
chr17:75004562|75004898 hsa-miR-637 1 0 1
chr17:75004562|75004898 hsa-miR-649 0 0 1
chr17:75004562|75004898 hsa-miR-892b 0 1 1
chr17:75004562|75004898 hsa-miR-541-5p 0 0 1
chr17:75004562|75004898 hsa-miR-541-3p 0 0 1
chr17:75004562|75004898 hsa-miR-939-5p 0 0 1
chr17:75004562|75004898 hsa-miR-939-3p 0 0 1
chr17:75004562|75004898 hsa-miR-1237-5p 0 0 1
chr17:75004562|75004898 hsa-miR-1237-3p 0 0 1
chr17:75004562|75004898 hsa-miR-1248 0 0 1
chr17:75004562|75004898 hsa-miR-671-5p 1 1 1
chr17:75004562|75004898 hsa-miR-296-3p 0 1 1
chr17:75004562|75004898 hsa-miR-767-5p 0 0 1
chr17:75004562|75004898 hsa-miR-485-5p 0 0 1
chr17:75004562|75004898 hsa-miR-423-5p 0 0 1
chr17:75004562|75004898 hsa-miR-654-5p 0 1 1
chr17:75004562|75004898 hsa-miR-508-5p 0 0 1
chr17:75004562|75004898 hsa-miR-1207-3p 0 0 1
chr17:75004562|75004898 hsa-miR-331-3p 0 0 1
chr17:75004562|75004898 hsa-miR-875-3p 0 1 1
chr17:75004562|75004898 hsa-miR-1207-5p 1 1 1
chr17:75004562|75004898 hsa-miR-324-3p 1 1 1
chr17:75004562|75004898 hsa-miR-1302 0 1 1
chr17:75004562|75004898 hsa-miR-516a-3p 0 0 1
chr17:75004562|75004898 hsa-miR-138 0 0 1
chr17:75004562|75004898 hsa-miR-1 0 0 1
chr17:75004562|75004898 hsa-miR-638 1 0 0
chr17:75004562|75004898 hsa-miR-663a 1 0 0
chr17:75004562|75004898 hsa-miR-762 1 1 0
chr17:75004562|75004898 hsa-miR-1469 1 0 0
chr17:75004562|75004898 hsa-miR-1913 0 1 0
chr17:75004562|75004898 hsa-miR-548q 0 1 0
chr17:75004562|75004898 hsa-miR-3155a 0 1 0
chr17:75004562|75004898 hsa-miR-3170 0 1 0
chr17:75004562|75004898 hsa-miR-3175 0 1 0
chr17:75004562|75004898 hsa-miR-3188 0 1 0
chr17:75004562|75004898 hsa-miR-4298 0 1 0
chr17:75004562|75004898 hsa-miR-4308 0 1 0
chr17:75004562|75004898 hsa-miR-4256 0 1 0
chr17:75004562|75004898 hsa-miR-3652 0 1 0
chr17:75004562|75004898 hsa-miR-3661 1 0 0
chr17:75004562|75004898 hsa-miR-3917 1 0 0
chr17:75004562|75004898 hsa-miR-4428 0 1 0
chr17:75004562|75004898 hsa-miR-4430 0 1 0
chr17:75004562|75004898 hsa-miR-4441 0 1 0
chr17:75004562|75004898 hsa-miR-4449 1 0 0
chr17:75004562|75004898 hsa-miR-4450 1 0 0
chr17:75004562|75004898 hsa-miR-3135b 0 1 0
chr17:75004562|75004898 hsa-miR-3155b 0 1 0
chr17:75004562|75004898 hsa-miR-4498 0 1 0
chr17:75004562|75004898 hsa-miR-3978 0 1 0
chr17:75004562|75004898 hsa-miR-4654 1 0 0
chr17:75004562|75004898 hsa-miR-4656 1 0 0
chr17:75004562|75004898 hsa-miR-4688 1 0 0
chr17:75004562|75004898 hsa-miR-4739 1 0 0
chr17:75004562|75004898 hsa-miR-5090 1 0 0
chr17:75004562|75004898 hsa-miR-5708 0 1 0
chr17:75004562|75004898 hsa-miR-5787 1 0 0
chr17:75004562|75004898 hsa-miR-6079 1 1 0
chr17:75004562|75004898 hsa-miR-6081 0 1 0
chr17:75004562|75004898 hsa-miR-6090 1 0 0
chr17:75004562|75004898 hsa-miR-6132 0 1 0
chr17:75004562|75004898 hsa-miR-7150 0 1 0
chr17:75004562|75004898 hsa-miR-8073 0 1 0
chr17:75004562|75004898 hsa-miR-8089 1 0 0
chr17:75004562|75004898 hsa-miR-12119 1 0 0
chr17:75004562|75004898 hsa-miR-12128 1 0 0
chr17:75004562|75004898 hsa-miR-138-5p 1 1 0
chr17:75004562|75004898 hsa-miR-93-3p 0 1 0
chr17:75004562|75004898 hsa-miR-7155-5p 0 1 0
chr17:75004562|75004898 hsa-miR-3064-5p 1 0 0
chr17:75004562|75004898 hsa-miR-7160-5p 1 1 0
chr17:75004562|75004898 hsa-miR-6727-5p 1 0 0
chr17:75004562|75004898 hsa-miR-874-3p 1 1 0
chr17:75004562|75004898 hsa-miR-7845-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6716-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6796-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6732-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6827-5p 1 0 0
chr17:75004562|75004898 hsa-miR-486-3p 1 0 0
chr17:75004562|75004898 hsa-miR-6782-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6821-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6850-5p 1 0 0
chr17:75004562|75004898 hsa-miR-221-3p 1 0 0
chr17:75004562|75004898 hsa-miR-6786-5p 1 1 0
chr17:75004562|75004898 hsa-miR-1226-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4738-3p 0 1 0
chr17:75004562|75004898 hsa-miR-4793-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6763-3p 1 0 0
chr17:75004562|75004898 hsa-miR-4786-3p 1 0 0
chr17:75004562|75004898 hsa-miR-4640-5p 1 0 0
chr17:75004562|75004898 hsa-miR-3127-5p 0 1 0
chr17:75004562|75004898 hsa-miR-7161-3p 1 0 0
chr17:75004562|75004898 hsa-miR-4690-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6823-5p 1 1 0
chr17:75004562|75004898 hsa-miR-4787-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4446-3p 0 1 0
chr17:75004562|75004898 hsa-miR-6824-5p 1 0 0
chr17:75004562|75004898 hsa-miR-3162-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4684-3p 1 0 0
chr17:75004562|75004898 hsa-miR-6878-5p 0 1 0
chr17:75004562|75004898 hsa-miR-7152-3p 1 0 0
chr17:75004562|75004898 hsa-miR-3191-3p 1 1 0
chr17:75004562|75004898 hsa-miR-4707-5p 1 1 0
chr17:75004562|75004898 hsa-miR-3158-3p 1 0 0
chr17:75004562|75004898 hsa-miR-6868-5p 0 1 0
chr17:75004562|75004898 hsa-miR-7113-5p 0 1 0
chr17:75004562|75004898 hsa-miR-4649-3p 0 1 0
chr17:75004562|75004898 hsa-miR-6777-3p 0 1 0
chr17:75004562|75004898 hsa-miR-6748-3p 0 1 0
chr17:75004562|75004898 hsa-miR-539-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6890-3p 0 1 0
chr17:75004562|75004898 hsa-miR-548av-3p 0 1 0
chr17:75004562|75004898 hsa-miR-1233-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4763-3p 1 1 0
chr17:75004562|75004898 hsa-miR-6769b-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6778-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6787-5p 1 1 0
chr17:75004562|75004898 hsa-miR-6812-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6775-5p 1 0 0
chr17:75004562|75004898 hsa-miR-5001-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6743-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6752-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6754-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6756-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6803-5p 1 1 0
chr17:75004562|75004898 hsa-miR-6813-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6819-5p 1 1 0
chr17:75004562|75004898 hsa-miR-6842-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6851-5p 1 1 0
chr17:75004562|75004898 hsa-miR-6722-3p 1 0 0
chr17:75004562|75004898 hsa-miR-6751-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6763-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6779-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6808-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6879-5p 1 0 0
chr17:75004562|75004898 hsa-miR-320a-5p 0 1 0
chr17:75004562|75004898 hsa-miR-3620-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6836-5p 0 1 0
chr17:75004562|75004898 hsa-miR-10396b-5p 1 1 0
chr17:75004562|75004898 hsa-miR-1909-3p 0 1 0
chr17:75004562|75004898 hsa-miR-328-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4632-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4685-5p 1 1 0
chr17:75004562|75004898 hsa-miR-4726-5p 1 0 0
chr17:75004562|75004898 hsa-miR-4745-3p 0 1 0
chr17:75004562|75004898 hsa-miR-4749-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6887-5p 1 0 0
chr17:75004562|75004898 hsa-miR-10396a-3p 1 1 0
chr17:75004562|75004898 hsa-miR-10396b-3p 1 1 0
chr17:75004562|75004898 hsa-miR-3940-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6855-5p 0 1 0
chr17:75004562|75004898 hsa-miR-4700-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6750-5p 1 0 0
chr17:75004562|75004898 hsa-miR-6724-5p 1 0 0
chr17:75004562|75004898 hsa-miR-10398-5p 0 1 0
chr17:75004562|75004898 hsa-miR-6791-5p 1 1 0
chr17:75004562|75004898 hsa-miR-10392-3p 1 0 0
chr17:75004562|75004898 hsa-miR-3619-5p 0 1 0
chr17:75004562|75004898 hsa-miR-4690-3p 0 1 0
chr17:75004562|75004898 hsa-miR-4653-5p 0 1 0
chr17:75004562|75004898 hsa-miR-301b-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:75004562|75004898
ORF Type ORF1
Protein Length 83
Nucleotide Length 252
Protein Sequence MSHLQGPDQVRDVPCHAEQEASAGPGVSLLQPCQGQVSPWILLAHRRSVASQRRRRRSPSAEWCSFAQSLSPWLPTPEMPAGP
Nucleotide Sequence CTGTCCCACCTCCAGGGTCCTGACCAGGTCAGAGATGTCCCCTGCCATGCAGAGCAGGAAGCCTCAGCTGGGCCTGGAGTGTCCCTGCTCCAGCCCTGCCAGGGACAGGTTTCTCCCTGGATACTCTTGGCCCACCGCAGATCTGTAGCCAGTCAGAGGAGGAGGAGAAGGAGCCCCTCAGCAGAGTGGTGCAGTTTCGCTCAGAGCTTGTCTCCTTGGCTTCCAACCCCAGAAATGCCTGCTGGGCCTTAA

CircID chr17:75004562|75004898
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MTRSEMSPAMQSRKPQLGLECPCSSPARDRFLPGYSWPTADL
Nucleotide Sequence CTGACCAGGTCAGAGATGTCCCCTGCCATGCAGAGCAGGAAGCCTCAGCTGGGCCTGGAGTGTCCCTGCTCCAGCCCTGCCAGGGACAGGTTTCTCCCTGGATACTCTTGGCCCACCGCAGATCTGTAG

CircID chr17:75004562|75004898
ORF Type ORF3
Protein Length 82
Nucleotide Length 246
Protein Sequence MPCRAGSLSWAWSVPAPALPGTGFSLDTLGPPQICSQSEEEEKEPLSRVVQFRSELVSLASNPRNACWALSFPGAGAVGSPH
Nucleotide Sequence CTGCCATGCAGAGCAGGAAGCCTCAGCTGGGCCTGGAGTGTCCCTGCTCCAGCCCTGCCAGGGACAGGTTTCTCCCTGGATACTCTTGGCCCACCGCAGATCTGTAGCCAGTCAGAGGAGGAGGAGAAGGAGCCCCTCAGCAGAGTGGTGCAGTTTCGCTCAGAGCTTGTCTCCTTGGCTTCCAACCCCAGAAATGCCTGCTGGGCCTTAAGCTTTCCAGGGGCCGGGGCAGTGGGGAGCCCCCAT

CircID chr17:75004562|75004898
ORF Type ORF4
Protein Length 67
Nucleotide Length 204
Protein Sequence MGLEAKETSSERNCTTLLRGSFSSSSDWLQICGGPRVSREKPVPGRAGAGTLQAQLRLPALHGRGHL
Nucleotide Sequence CTGGGGTTGGAAGCCAAGGAGACAAGCTCTGAGCGAAACTGCACCACTCTGCTGAGGGGCTCCTTCTCCTCCTCCTCTGACTGGCTACAGATCTGCGGTGGGCCAAGAGTATCCAGGGAGAAACCTGTCCCTGGCAGGGCTGGAGCAGGGACACTCCAGGCCCAGCTGAGGCTTCCTGCTCTGCATGGCAGGGGACATCTCTGA

CircID chr17:75004562|75004898
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MPRPLESLRPSRHFWGWKPRRQALSETAPLC
Nucleotide Sequence CTGCCCCGGCCCCTGGAAAGCTTAAGGCCCAGCAGGCATTTCTGGGGTTGGAAGCCAAGGAGACAAGCTCTGAGCGAAACTGCACCACTCTGCTGA

CircID chr17:75004562|75004898
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MTGYRSAVGQEYPGRNLSLAGLEQGHSRPS
Nucleotide Sequence CTGACTGGCTACAGATCTGCGGTGGGCCAAGAGTATCCAGGGAGAAACCTGTCCCTGGCAGGGCTGGAGCAGGGACACTCCAGGCCCAGCTGA

CircID chr17:75004562|75004898
ORF Type ORF7
Protein Length 35
Nucleotide Length 105
Protein Sequence MLCMAGDISDLVRTLEVGQLVLRECQRIRVGEKQW
Nucleotide Sequence CTGCTCTGCATGGCAGGGGACATCTCTGACCTGGTCAGGACCCTGGAGGTGGGACAGCTGGTGCTAAGGGAATGTCAGCGCATCAGGGTTGGGGAGAAGCAGTGG

CircID chr17:75004562|75004898
ORF Type ORF8
Protein Length 53
Nucleotide Length 162
Protein Sequence MATDLRWAKSIQGETCPWQGWSRDTPGPAEASCSAWQGTSLTWSGPWRWDSWC
Nucleotide Sequence CTGGCTACAGATCTGCGGTGGGCCAAGAGTATCCAGGGAGAAACCTGTCCCTGGCAGGGCTGGAGCAGGGACACTCCAGGCCCAGCTGAGGCTTCCTGCTCTGCATGGCAGGGGACATCTCTGACCTGGTCAGGACCCTGGAGGTGGGACAGCTGGTGCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites