CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75100207|75100341
Strand -
CircType exon
Host Gene ENSG00000170190.14;
Algorism CIRI2;
Sequence TGCTGCATCTGCGGGGCCATCATAAGGCCTGTGGCCACCAGTGTGGCCCCTGAGACCAAAGAATGTCCCCCGCCACCTCCCGAGACACCTGCACTTGGCTGCCTGGCTGCATGCGGCCGGACCATCCAGCGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75100207|75100341 hsa-miR-107 0 0 1
chr17:75100207|75100341 hsa-miR-133b 0 0 1
chr17:75100207|75100341 hsa-miR-588 0 0 1
chr17:75100207|75100341 hsa-miR-657 0 0 1
chr17:75100207|75100341 hsa-miR-1287-5p 0 0 1
chr17:75100207|75100341 hsa-miR-1287-3p 0 0 1
chr17:75100207|75100341 hsa-miR-1266-5p 0 0 1
chr17:75100207|75100341 hsa-miR-1266-3p 0 0 1
chr17:75100207|75100341 hsa-miR-1272 0 0 1
chr17:75100207|75100341 hsa-miR-1322 0 0 1
chr17:75100207|75100341 hsa-miR-519b-3p 0 0 1
chr17:75100207|75100341 hsa-miR-519c-3p 0 0 1
chr17:75100207|75100341 hsa-miR-103 0 0 1
chr17:75100207|75100341 hsa-miR-9 0 0 1
chr17:75100207|75100341 hsa-miR-663 0 0 1
chr17:75100207|75100341 hsa-miR-133a 0 0 1
chr17:75100207|75100341 hsa-miR-519a 0 0 1
chr17:75100207|75100341 hsa-miR-346 1 0 0
chr17:75100207|75100341 hsa-miR-608 1 0 0
chr17:75100207|75100341 hsa-miR-637 1 0 0
chr17:75100207|75100341 hsa-miR-663a 1 0 0
chr17:75100207|75100341 hsa-miR-1183 1 0 0
chr17:75100207|75100341 hsa-miR-1268a 1 0 0
chr17:75100207|75100341 hsa-miR-1471 1 0 0
chr17:75100207|75100341 hsa-miR-3141 1 0 0
chr17:75100207|75100341 hsa-miR-3196 1 0 0
chr17:75100207|75100341 hsa-miR-3665 1 0 0
chr17:75100207|75100341 hsa-miR-3937 1 0 0
chr17:75100207|75100341 hsa-miR-1268b 1 0 0
chr17:75100207|75100341 hsa-miR-4449 1 0 0
chr17:75100207|75100341 hsa-miR-4467 1 0 0
chr17:75100207|75100341 hsa-miR-3689c 1 0 0
chr17:75100207|75100341 hsa-miR-4488 1 0 0
chr17:75100207|75100341 hsa-miR-4525 1 0 0
chr17:75100207|75100341 hsa-miR-4651 1 0 0
chr17:75100207|75100341 hsa-miR-4706 1 0 0
chr17:75100207|75100341 hsa-miR-4710 1 0 0
chr17:75100207|75100341 hsa-miR-4730 1 0 0
chr17:75100207|75100341 hsa-miR-5705 1 0 0
chr17:75100207|75100341 hsa-miR-5787 1 0 0
chr17:75100207|75100341 hsa-miR-6134 1 0 0
chr17:75100207|75100341 hsa-miR-8072 1 0 0
chr17:75100207|75100341 hsa-miR-8089 1 0 0
chr17:75100207|75100341 hsa-miR-92a-2-5p 1 0 0
chr17:75100207|75100341 hsa-miR-4731-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3157-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6747-5p 1 0 0
chr17:75100207|75100341 hsa-miR-7106-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6825-5p 1 0 0
chr17:75100207|75100341 hsa-miR-125a-3p 1 0 0
chr17:75100207|75100341 hsa-miR-6799-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3192-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6880-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6746-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3677-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3151-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6732-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6782-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6810-5p 1 0 0
chr17:75100207|75100341 hsa-miR-30b-3p 1 0 0
chr17:75100207|75100341 hsa-miR-6786-5p 1 0 0
chr17:75100207|75100341 hsa-miR-4640-5p 1 0 0
chr17:75100207|75100341 hsa-miR-885-3p 1 0 0
chr17:75100207|75100341 hsa-miR-1908-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6771-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3677-3p 1 0 0
chr17:75100207|75100341 hsa-miR-4787-5p 1 0 0
chr17:75100207|75100341 hsa-miR-149-3p 1 0 0
chr17:75100207|75100341 hsa-miR-6800-5p 1 0 0
chr17:75100207|75100341 hsa-miR-7156-3p 1 0 0
chr17:75100207|75100341 hsa-miR-3191-3p 1 0 0
chr17:75100207|75100341 hsa-miR-1250-5p 1 0 0
chr17:75100207|75100341 hsa-miR-744-5p 1 0 0
chr17:75100207|75100341 hsa-miR-4750-5p 1 0 0
chr17:75100207|75100341 hsa-miR-10400-5p 1 0 0
chr17:75100207|75100341 hsa-miR-1233-5p 1 0 0
chr17:75100207|75100341 hsa-miR-1273h-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3689b-3p 1 0 0
chr17:75100207|75100341 hsa-miR-4763-3p 1 0 0
chr17:75100207|75100341 hsa-miR-6769b-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6778-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6787-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6816-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6865-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6870-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6893-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6775-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6726-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6737-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6743-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6752-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6756-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6803-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6815-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6819-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6842-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6851-5p 1 0 0
chr17:75100207|75100341 hsa-miR-7110-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6722-3p 1 0 0
chr17:75100207|75100341 hsa-miR-6751-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6779-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6780a-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6879-5p 1 0 0
chr17:75100207|75100341 hsa-miR-7111-5p 1 0 0
chr17:75100207|75100341 hsa-miR-10396a-5p 1 0 0
chr17:75100207|75100341 hsa-miR-10396b-5p 1 0 0
chr17:75100207|75100341 hsa-miR-1237-5p 1 0 0
chr17:75100207|75100341 hsa-miR-328-5p 1 0 0
chr17:75100207|75100341 hsa-miR-3689a-3p 1 0 0
chr17:75100207|75100341 hsa-miR-4632-5p 1 0 0
chr17:75100207|75100341 hsa-miR-4749-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6777-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6794-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6795-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6846-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6848-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6883-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6887-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6889-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6885-5p 1 0 0
chr17:75100207|75100341 hsa-miR-365b-5p 1 0 0
chr17:75100207|75100341 hsa-miR-6511b-5p 1 0 0
chr17:75100207|75100341 hsa-miR-4665-5p 1 0 0
chr17:75100207|75100341 hsa-miR-4472 1 0 0
chr17:75100207|75100341 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:75100207|75100341
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MWPPVWPLRPKNVPRHLPRHLHLAAWLHAAGPSSA
Nucleotide Sequence CTGTGGCCACCAGTGTGGCCCCTGAGACCAAAGAATGTCCCCCGCCACCTCCCGAGACACCTGCACTTGGCTGCCTGGCTGCATGCGGCCGGACCATCCAGCGCC
CircID chr17:75100207|75100341
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MDGPAACSQAAKCRCLGRWRGTFFGLRGHTGGHRPYDGPADAA
Nucleotide Sequence CTGGATGGTCCGGCCGCATGCAGCCAGGCAGCCAAGTGCAGGTGTCTCGGGAGGTGGCGGGGGACATTCTTTGGTCTCAGGGGCCACACTGGTGGCCACAGGCCTTATGATGGCCCCGCAGATGCAGCA
CircID chr17:75100207|75100341
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MVRPHAARQPSAGVSGGGGGHSLVSGATLVATGLMMAPQMQ
Nucleotide Sequence ATGGTCCGGCCGCATGCAGCCAGGCAGCCAAGTGCAGGTGTCTCGGGAGGTGGCGGGGGACATTCTTTGGTCTCAGGGGCCACACTGGTGGCCACAGGCCTTATGATGGCCCCGCAGATGCAG
CircID chr17:75100207|75100341
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MQPGSQVQVSREVAGDILWSQGPHWWPQAL
Nucleotide Sequence ATGCAGCCAGGCAGCCAAGTGCAGGTGTCTCGGGAGGTGGCGGGGGACATTCTTTGGTCTCAGGGGCCACACTGGTGGCCACAGGCCTTATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab