CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7512894|7513201
Strand +
CircType exon
Host Gene ENSG00000181222.13;
Algorism CIRI2;
Sequence GTTGGCGAATAGCTGGGTGATGTGGGACTATAGTTGGGACTGGTTGGAGAATAGGATGGAGAGGTAGGGGAGTAGGAGGGTGAAGTGGGGGAATAAGAGGGACTCTGGGGTGTGTAGCCCCCAGGAGAGCGGGGCTCGTAGGCAGGTGACGTTGGCGAGTAGCTGGGAGACATGGCACCACCTGTGGGGAAGCAGCCAACAAAGGAGATGAGCAATGGACAGACTCACCCAGAACTGTGGAGGAAACAAACCTGGCCTGACAGATGGCGACAACTCACCTGGTGAAGGGATGTAGGGGCTTGAGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7512894|7513201 hsa-miR-197-5p 0 0 1
chr17:7512894|7513201 hsa-miR-197-3p 0 0 1
chr17:7512894|7513201 hsa-miR-136-5p 0 0 1
chr17:7512894|7513201 hsa-miR-136-3p 0 0 1
chr17:7512894|7513201 hsa-miR-150-5p 0 0 1
chr17:7512894|7513201 hsa-miR-150-3p 0 0 1
chr17:7512894|7513201 hsa-miR-412-5p 0 0 1
chr17:7512894|7513201 hsa-miR-412-3p 0 0 1
chr17:7512894|7513201 hsa-miR-552-5p 0 0 1
chr17:7512894|7513201 hsa-miR-552-3p 0 0 1
chr17:7512894|7513201 hsa-miR-571 0 0 1
chr17:7512894|7513201 hsa-miR-603 0 0 1
chr17:7512894|7513201 hsa-miR-604 0 0 1
chr17:7512894|7513201 hsa-miR-627-5p 0 0 1
chr17:7512894|7513201 hsa-miR-627-3p 0 0 1
chr17:7512894|7513201 hsa-miR-637 0 1 1
chr17:7512894|7513201 hsa-miR-647 0 0 1
chr17:7512894|7513201 hsa-miR-924 0 0 1
chr17:7512894|7513201 hsa-miR-1178-5p 0 0 1
chr17:7512894|7513201 hsa-miR-1178-3p 0 0 1
chr17:7512894|7513201 hsa-miR-1226-5p 0 0 1
chr17:7512894|7513201 hsa-miR-1226-3p 0 0 1
chr17:7512894|7513201 hsa-miR-1238-5p 0 0 1
chr17:7512894|7513201 hsa-miR-1238-3p 0 0 1
chr17:7512894|7513201 hsa-miR-1262 0 1 1
chr17:7512894|7513201 hsa-miR-125a-3p 0 1 1
chr17:7512894|7513201 hsa-miR-1225-3p 1 0 1
chr17:7512894|7513201 hsa-miR-532-3p 1 0 1
chr17:7512894|7513201 hsa-miR-361-3p 0 0 1
chr17:7512894|7513201 hsa-miR-188-5p 0 1 1
chr17:7512894|7513201 hsa-miR-188-3p 0 0 1
chr17:7512894|7513201 hsa-miR-515-5p 0 0 1
chr17:7512894|7513201 hsa-miR-516a-3p 0 0 1
chr17:7512894|7513201 hsa-miR-362-3p 0 0 1
chr17:7512894|7513201 hsa-miR-642 0 0 1
chr17:7512894|7513201 hsa-miR-329 0 0 1
chr17:7512894|7513201 hsa-miR-219-1-3p 0 0 1
chr17:7512894|7513201 hsa-miR-499-3p 0 0 1
chr17:7512894|7513201 hsa-miR-133b 1 0 0
chr17:7512894|7513201 hsa-miR-554 1 1 0
chr17:7512894|7513201 hsa-miR-662 1 0 0
chr17:7512894|7513201 hsa-miR-1248 1 0 0
chr17:7512894|7513201 hsa-miR-1260a 1 0 0
chr17:7512894|7513201 hsa-miR-1470 1 0 0
chr17:7512894|7513201 hsa-miR-1913 1 0 0
chr17:7512894|7513201 hsa-miR-1976 1 0 0
chr17:7512894|7513201 hsa-miR-4326 1 0 0
chr17:7512894|7513201 hsa-miR-4286 1 0 0
chr17:7512894|7513201 hsa-miR-4290 1 0 0
chr17:7512894|7513201 hsa-miR-3685 1 0 0
chr17:7512894|7513201 hsa-miR-3938 1 0 0
chr17:7512894|7513201 hsa-miR-3941 0 1 0
chr17:7512894|7513201 hsa-miR-4469 1 0 0
chr17:7512894|7513201 hsa-miR-5193 1 0 0
chr17:7512894|7513201 hsa-miR-7703 1 0 0
chr17:7512894|7513201 hsa-miR-9898 1 0 0
chr17:7512894|7513201 hsa-miR-26b-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6749-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4747-3p 1 0 0
chr17:7512894|7513201 hsa-miR-18a-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6747-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4726-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6836-3p 1 0 0
chr17:7512894|7513201 hsa-miR-1972 0 1 0
chr17:7512894|7513201 hsa-miR-766-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6892-3p 1 0 0
chr17:7512894|7513201 hsa-miR-210-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6881-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6875-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6741-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6762-3p 1 1 0
chr17:7512894|7513201 hsa-miR-138-1-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6873-3p 1 1 0
chr17:7512894|7513201 hsa-miR-7110-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6817-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6726-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6832-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6845-3p 1 1 0
chr17:7512894|7513201 hsa-miR-877-3p 1 1 0
chr17:7512894|7513201 hsa-miR-6882-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6788-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6858-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4713-5p 1 1 0
chr17:7512894|7513201 hsa-miR-4436b-5p 1 0 0
chr17:7512894|7513201 hsa-miR-7109-3p 0 1 0
chr17:7512894|7513201 hsa-miR-1343-3p 0 1 0
chr17:7512894|7513201 hsa-miR-4793-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6763-3p 1 0 0
chr17:7512894|7513201 hsa-miR-1247-5p 1 0 0
chr17:7512894|7513201 hsa-miR-4640-5p 1 0 0
chr17:7512894|7513201 hsa-miR-3679-3p 1 1 0
chr17:7512894|7513201 hsa-miR-3667-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6821-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6818-3p 1 0 0
chr17:7512894|7513201 hsa-miR-5196-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4667-3p 1 1 0
chr17:7512894|7513201 hsa-miR-6824-5p 1 0 0
chr17:7512894|7513201 hsa-miR-1306-5p 1 0 0
chr17:7512894|7513201 hsa-miR-4715-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6769a-3p 1 1 0
chr17:7512894|7513201 hsa-miR-211-5p 1 0 0
chr17:7512894|7513201 hsa-miR-4776-3p 1 0 0
chr17:7512894|7513201 hsa-miR-1236-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6785-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4687-5p 1 0 0
chr17:7512894|7513201 hsa-miR-2114-5p 1 0 0
chr17:7512894|7513201 hsa-miR-4732-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6867-3p 1 0 0
chr17:7512894|7513201 hsa-miR-629-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6793-3p 1 0 0
chr17:7512894|7513201 hsa-miR-1910-5p 1 0 0
chr17:7512894|7513201 hsa-miR-1224-3p 1 0 0
chr17:7512894|7513201 hsa-miR-2276-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6752-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6872-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6837-3p 1 1 0
chr17:7512894|7513201 hsa-miR-6895-3p 1 0 0
chr17:7512894|7513201 hsa-miR-7848-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6865-3p 1 1 0
chr17:7512894|7513201 hsa-miR-6826-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6886-3p 1 0 0
chr17:7512894|7513201 hsa-miR-5088-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4749-3p 1 0 0
chr17:7512894|7513201 hsa-miR-328-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4746-5p 1 0 0
chr17:7512894|7513201 hsa-miR-3151-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6777-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6794-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6760-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6802-3p 1 0 0
chr17:7512894|7513201 hsa-miR-204-5p 1 0 0
chr17:7512894|7513201 hsa-miR-454-5p 1 0 0
chr17:7512894|7513201 hsa-miR-7152-5p 0 1 0
chr17:7512894|7513201 hsa-miR-6851-3p 1 0 0
chr17:7512894|7513201 hsa-miR-3620-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4433a-5p 0 1 0
chr17:7512894|7513201 hsa-miR-1229-3p 1 0 0
chr17:7512894|7513201 hsa-miR-3173-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6798-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4433b-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6734-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6515-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4639-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6729-3p 1 0 0
chr17:7512894|7513201 hsa-miR-676-5p 1 0 0
chr17:7512894|7513201 hsa-miR-642a-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6800-3p 1 0 0
chr17:7512894|7513201 hsa-miR-3162-3p 1 1 0
chr17:7512894|7513201 hsa-miR-1228-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6509-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6731-3p 1 1 0
chr17:7512894|7513201 hsa-miR-576-5p 1 0 0
chr17:7512894|7513201 hsa-miR-3156-3p 1 0 0
chr17:7512894|7513201 hsa-miR-513b-3p 0 1 0
chr17:7512894|7513201 hsa-miR-550b-3p 1 0 0
chr17:7512894|7513201 hsa-miR-133a-3p 1 0 0
chr17:7512894|7513201 hsa-miR-885-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6756-5p 1 0 0
chr17:7512894|7513201 hsa-miR-3127-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4685-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6754-3p 1 1 0
chr17:7512894|7513201 hsa-miR-6866-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6846-5p 0 1 0
chr17:7512894|7513201 hsa-miR-3085-5p 1 1 0
chr17:7512894|7513201 hsa-miR-30c-1-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6736-5p 0 1 0
chr17:7512894|7513201 hsa-miR-6753-3p 1 0 0
chr17:7512894|7513201 hsa-miR-7107-3p 1 1 0
chr17:7512894|7513201 hsa-miR-4722-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6727-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6893-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6511a-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6756-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6784-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6792-3p 1 1 0
chr17:7512894|7513201 hsa-miR-6862-3p 0 1 0
chr17:7512894|7513201 hsa-miR-6801-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6810-3p 1 1 0
chr17:7512894|7513201 hsa-miR-3059-5p 1 0 0
chr17:7512894|7513201 hsa-miR-4723-3p 1 0 0
chr17:7512894|7513201 hsa-miR-483-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6769b-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6823-3p 1 0 0
chr17:7512894|7513201 hsa-miR-6744-3p 1 0 0
chr17:7512894|7513201 hsa-miR-4691-5p 1 0 0
chr17:7512894|7513201 hsa-miR-4768-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6833-3p 1 0 0
chr17:7512894|7513201 hsa-miR-1-5p 1 0 0
chr17:7512894|7513201 hsa-miR-6874-3p 0 1 0
chr17:7512894|7513201 hsa-miR-550a-3p 1 0 0
chr17:7512894|7513201 hsa-miR-329-3p 0 1 0
chr17:7512894|7513201 hsa-miR-5588-3p 0 1 0
chr17:7512894|7513201 hsa-miR-549a-5p 0 1 0
chr17:7512894|7513201 hsa-miR-4659a-5p 0 1 0
chr17:7512894|7513201 hsa-miR-4659b-5p 0 1 0
chr17:7512894|7513201 hsa-miR-202-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7512894|7513201
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MGDMAPPVGKQPTKEMSNGQTHPELWRKQTWPDRWRQLTW
Nucleotide Sequence CTGGGAGACATGGCACCACCTGTGGGGAAGCAGCCAACAAAGGAGATGAGCAATGGACAGACTCACCCAGAACTGTGGAGGAAACAAACCTGGCCTGACAGATGGCGACAACTCACCTGGTGA
CircID chr17:7512894|7513201
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MDRLTQNCGGNKPGLTDGDNSPGEGM
Nucleotide Sequence ATGGACAGACTCACCCAGAACTGTGGAGGAAACAAACCTGGCCTGACAGATGGCGACAACTCACCTGGTGAAGGGATGTAG
CircID chr17:7512894|7513201
ORF Type ORF3
Protein Length 71
Nucleotide Length 213
Protein Sequence MLISFVGCFPTGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP
Nucleotide Sequence TTGCTCATCTCCTTTGTTGGCTGCTTCCCCACAGGTGGTGCCATGTCTCCCAGCTACTCGCCAACGTCACCTGCCTACGAGCCCCGCTCTCCTGGGGGCTACACACCCCAGAGTCCCTCTTATTCCCCCACTTCACCCTCCTACTCCCCTACCTCTCCATCCTATTCTCCAACCAGTCCCAACTATAGTCCCACATCACCCAGCTATTCGCCA
CircID chr17:7512894|7513201
ORF Type ORF4
Protein Length 77
Nucleotide Length 231
Protein Sequence MGESVHCSSPLLAASPQVVPCLPATRQRHLPTSPALLGATHPRVPLIPPLHPPTPLPLHPILQPVPTIVPHHPAIRQ
Nucleotide Sequence CTGGGTGAGTCTGTCCATTGCTCATCTCCTTTGTTGGCTGCTTCCCCACAGGTGGTGCCATGTCTCCCAGCTACTCGCCAACGTCACCTGCCTACGAGCCCCGCTCTCCTGGGGGCTACACACCCCAGAGTCCCTCTTATTCCCCCACTTCACCCTCCTACTCCCCTACCTCTCCATCCTATTCTCCAACCAGTCCCAACTATAGTCCCACATCACCCAGCTATTCGCCAA
CircID chr17:7512894|7513201
ORF Type ORF5
Protein Length 81
Nucleotide Length 246
Protein Sequence MSPSVRPGLFPPQFWVSLSIAHLLCWLLPHRWCHVSQLLANVTCLRAPLSWGLHTPESLLFPHFTLLLPYLSILFSNQSQL
Nucleotide Sequence TTGTCGCCATCTGTCAGGCCAGGTTTGTTTCCTCCACAGTTCTGGGTGAGTCTGTCCATTGCTCATCTCCTTTGTTGGCTGCTTCCCCACAGGTGGTGCCATGTCTCCCAGCTACTCGCCAACGTCACCTGCCTACGAGCCCCGCTCTCCTGGGGGCTACACACCCCAGAGTCCCTCTTATTCCCCCACTTCACCCTCCTACTCCCCTACCTCTCCATCCTATTCTCCAACCAGTCCCAACTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab