CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75499443|75499626
Strand -
CircType exon
Host Gene ENSG00000177728.13;
Algorism CIRI2;
Sequence CCGTGGCACTGGAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTCCTGAGCCCTGGGGCTCACTGTGGAGGAGCTGACGGCCTGGGCCCTTGGCCAGTCCTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGGGGCCCTAAACCCCCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75499443|75499626 hsa-miR-181c-5p 0 0 1
chr17:75499443|75499626 hsa-miR-181c-3p 0 0 1
chr17:75499443|75499626 hsa-miR-335-5p 0 0 1
chr17:75499443|75499626 hsa-miR-335-3p 0 0 1
chr17:75499443|75499626 hsa-miR-193b-5p 0 0 1
chr17:75499443|75499626 hsa-miR-193b-3p 0 0 1
chr17:75499443|75499626 hsa-miR-181d-5p 0 0 1
chr17:75499443|75499626 hsa-miR-181d-3p 0 0 1
chr17:75499443|75499626 hsa-miR-602 0 1 1
chr17:75499443|75499626 hsa-miR-629-5p 0 0 1
chr17:75499443|75499626 hsa-miR-629-3p 0 0 1
chr17:75499443|75499626 hsa-miR-1296-5p 0 0 1
chr17:75499443|75499626 hsa-miR-1296-3p 0 0 1
chr17:75499443|75499626 hsa-miR-873-5p 0 0 1
chr17:75499443|75499626 hsa-miR-873-3p 0 0 1
chr17:75499443|75499626 hsa-miR-920 0 1 1
chr17:75499443|75499626 hsa-miR-939-5p 0 0 1
chr17:75499443|75499626 hsa-miR-939-3p 0 0 1
chr17:75499443|75499626 hsa-miR-1227-5p 0 0 1
chr17:75499443|75499626 hsa-miR-1227-3p 0 0 1
chr17:75499443|75499626 hsa-miR-1321 0 0 1
chr17:75499443|75499626 hsa-miR-1825 0 0 1
chr17:75499443|75499626 hsa-miR-1225-3p 0 0 1
chr17:75499443|75499626 hsa-miR-145-5p 0 0 1
chr17:75499443|75499626 hsa-miR-296-5p 0 0 1
chr17:75499443|75499626 hsa-miR-199a-5p 0 0 1
chr17:75499443|75499626 hsa-miR-423-5p 0 0 1
chr17:75499443|75499626 hsa-miR-339-3p 0 1 1
chr17:75499443|75499626 hsa-miR-199b-5p 0 0 1
chr17:75499443|75499626 hsa-miR-193a-3p 0 1 1
chr17:75499443|75499626 hsa-miR-1233 0 0 1
chr17:75499443|75499626 hsa-miR-128 0 0 1
chr17:75499443|75499626 hsa-miR-7 0 0 1
chr17:75499443|75499626 hsa-miR-181a 0 0 1
chr17:75499443|75499626 hsa-miR-181b 0 0 1
chr17:75499443|75499626 hsa-miR-24 0 0 1
chr17:75499443|75499626 hsa-miR-638 1 0 0
chr17:75499443|75499626 hsa-miR-663a 1 0 0
chr17:75499443|75499626 hsa-miR-762 1 1 0
chr17:75499443|75499626 hsa-miR-760 1 0 0
chr17:75499443|75499626 hsa-miR-1538 1 1 0
chr17:75499443|75499626 hsa-miR-544b 1 1 0
chr17:75499443|75499626 hsa-miR-3138 1 0 0
chr17:75499443|75499626 hsa-miR-3185 1 0 0
chr17:75499443|75499626 hsa-miR-4300 0 1 0
chr17:75499443|75499626 hsa-miR-4323 0 1 0
chr17:75499443|75499626 hsa-miR-3945 1 0 0
chr17:75499443|75499626 hsa-miR-4437 1 1 0
chr17:75499443|75499626 hsa-miR-4462 0 1 0
chr17:75499443|75499626 hsa-miR-4498 1 0 0
chr17:75499443|75499626 hsa-miR-4518 0 1 0
chr17:75499443|75499626 hsa-miR-4656 1 0 0
chr17:75499443|75499626 hsa-miR-4673 0 1 0
chr17:75499443|75499626 hsa-miR-4706 1 0 0
chr17:75499443|75499626 hsa-miR-4721 1 0 0
chr17:75499443|75499626 hsa-miR-4739 1 0 0
chr17:75499443|75499626 hsa-miR-5787 1 0 0
chr17:75499443|75499626 hsa-miR-6077 0 1 0
chr17:75499443|75499626 hsa-miR-6090 1 0 0
chr17:75499443|75499626 hsa-miR-128-3p 0 1 0
chr17:75499443|75499626 hsa-miR-4747-3p 1 0 0
chr17:75499443|75499626 hsa-miR-6765-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6089 1 0 0
chr17:75499443|75499626 hsa-miR-5589-5p 0 1 0
chr17:75499443|75499626 hsa-miR-6796-5p 1 0 0
chr17:75499443|75499626 hsa-miR-185-3p 0 1 0
chr17:75499443|75499626 hsa-miR-6805-5p 1 0 0
chr17:75499443|75499626 hsa-miR-7855-5p 0 1 0
chr17:75499443|75499626 hsa-miR-5008-5p 0 1 0
chr17:75499443|75499626 hsa-miR-3934-3p 1 1 0
chr17:75499443|75499626 hsa-miR-615-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6786-5p 1 0 0
chr17:75499443|75499626 hsa-miR-5088-5p 1 1 0
chr17:75499443|75499626 hsa-miR-1226-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6753-5p 0 1 0
chr17:75499443|75499626 hsa-miR-885-3p 1 0 0
chr17:75499443|75499626 hsa-miR-4446-3p 1 0 0
chr17:75499443|75499626 hsa-miR-6736-3p 0 1 0
chr17:75499443|75499626 hsa-miR-181b-5p 0 1 0
chr17:75499443|75499626 hsa-miR-7160-3p 0 1 0
chr17:75499443|75499626 hsa-miR-664b-5p 1 0 0
chr17:75499443|75499626 hsa-miR-216a-3p 0 1 0
chr17:75499443|75499626 hsa-miR-6508-3p 0 1 0
chr17:75499443|75499626 hsa-miR-7113-5p 1 0 0
chr17:75499443|75499626 hsa-miR-4649-3p 0 1 0
chr17:75499443|75499626 hsa-miR-3664-3p 0 1 0
chr17:75499443|75499626 hsa-miR-181a-5p 0 1 0
chr17:75499443|75499626 hsa-miR-4763-3p 1 0 0
chr17:75499443|75499626 hsa-miR-6787-5p 1 0 0
chr17:75499443|75499626 hsa-miR-1343-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6726-5p 1 1 0
chr17:75499443|75499626 hsa-miR-6752-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6803-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6813-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6819-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6763-5p 1 1 0
chr17:75499443|75499626 hsa-miR-1915-3p 1 1 0
chr17:75499443|75499626 hsa-miR-3620-5p 1 0 0
chr17:75499443|75499626 hsa-miR-10396a-5p 1 0 0
chr17:75499443|75499626 hsa-miR-10396b-5p 1 0 0
chr17:75499443|75499626 hsa-miR-4685-5p 1 1 0
chr17:75499443|75499626 hsa-miR-6729-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6777-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6848-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6889-5p 1 1 0
chr17:75499443|75499626 hsa-miR-6511a-5p 0 1 0
chr17:75499443|75499626 hsa-miR-1914-3p 1 0 0
chr17:75499443|75499626 hsa-miR-6724-5p 1 0 0
chr17:75499443|75499626 hsa-miR-550a-5p 1 0 0
chr17:75499443|75499626 hsa-miR-6792-3p 0 1 0
chr17:75499443|75499626 hsa-miR-6837-5p 0 1 0
chr17:75499443|75499626 hsa-miR-4691-5p 0 1 0
chr17:75499443|75499626 hsa-miR-6764-5p 0 1 0
chr17:75499443|75499626 hsa-miR-3059-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:75499443|75499626
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MGLTVEELTAWALGQSWLFPGPHQGHS
Nucleotide Sequence CTGGGGCTCACTGTGGAGGAGCTGACGGCCTGGGCCCTTGGCCAGTCCTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTGA
CircID chr17:75499443|75499626
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence METQLPVSDPAVFLSPGAHCGGADGLGPWPVLALPWASPGTLLNVWPQALPRGALNPL
Nucleotide Sequence CTGGAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTCCTGAGCCCTGGGGCTCACTGTGGAGGAGCTGACGGCCTGGGCCCTTGGCCAGTCCTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGGGGCCCTAAACCCCCTC
CircID chr17:75499443|75499626
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MVRPREEPGLAKGPGRQLLHSEPQGSGRQRGLTRGAGFPVPR
Nucleotide Sequence CTGGTGAGGCCCAGGGAAGAGCCAGGACTGGCCAAGGGCCCAGGCCGTCAGCTCCTCCACAGTGAGCCCCAGGGCTCAGGAAGACAGCGGGGTCTGACACGGGGAGCTGGGTTTCCAGTGCCACGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab