CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7557120|7557233
Strand +
CircType exon
Host Gene ENSG00000239697.9;
Algorism CIRI2;
Sequence CTGGCAGAGGCGGAGCTGGGGCCCGAGGGAACTCGCCGCAGTGGCTGAGAATTCCTCCAGGCAGCGCAGGGCCAGCACACCATCCACCAGCAAGTCCAGCTTCAGGTAGACAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7557120|7557233 hsa-miR-328-5p 0 0 1
chr17:7557120|7557233 hsa-miR-328-3p 0 0 1
chr17:7557120|7557233 hsa-miR-422a 0 0 1
chr17:7557120|7557233 hsa-miR-626 0 0 1
chr17:7557120|7557233 hsa-miR-661 1 0 1
chr17:7557120|7557233 hsa-miR-765 0 0 1
chr17:7557120|7557233 hsa-miR-934 0 0 1
chr17:7557120|7557233 hsa-miR-1291 0 0 1
chr17:7557120|7557233 hsa-miR-127-5p 0 0 1
chr17:7557120|7557233 hsa-miR-296-5p 0 1 1
chr17:7557120|7557233 hsa-miR-642 0 0 1
chr17:7557120|7557233 hsa-miR-378 0 0 1
chr17:7557120|7557233 hsa-miR-138 0 0 1
chr17:7557120|7557233 hsa-miR-1254 0 0 1
chr17:7557120|7557233 hsa-miR-622 1 0 0
chr17:7557120|7557233 hsa-miR-637 1 0 0
chr17:7557120|7557233 hsa-miR-663b 0 1 0
chr17:7557120|7557233 hsa-miR-1539 0 1 0
chr17:7557120|7557233 hsa-miR-378b 0 1 0
chr17:7557120|7557233 hsa-miR-3165 0 1 0
chr17:7557120|7557233 hsa-miR-3181 0 1 0
chr17:7557120|7557233 hsa-miR-378c 0 1 0
chr17:7557120|7557233 hsa-miR-4254 0 1 0
chr17:7557120|7557233 hsa-miR-4285 0 1 0
chr17:7557120|7557233 hsa-miR-378e 0 1 0
chr17:7557120|7557233 hsa-miR-378h 0 1 0
chr17:7557120|7557233 hsa-miR-4741 1 0 0
chr17:7557120|7557233 hsa-miR-6765-5p 1 0 0
chr17:7557120|7557233 hsa-miR-6894-5p 1 0 0
chr17:7557120|7557233 hsa-miR-766-5p 0 1 0
chr17:7557120|7557233 hsa-miR-6762-3p 1 0 0
chr17:7557120|7557233 hsa-miR-6787-3p 0 1 0
chr17:7557120|7557233 hsa-miR-6798-5p 1 0 0
chr17:7557120|7557233 hsa-miR-4691-3p 0 1 0
chr17:7557120|7557233 hsa-miR-5001-3p 0 1 0
chr17:7557120|7557233 hsa-miR-6736-3p 0 1 0
chr17:7557120|7557233 hsa-miR-3173-5p 0 1 0
chr17:7557120|7557233 hsa-miR-324-3p 0 1 0
chr17:7557120|7557233 hsa-miR-378a-3p 0 1 0
chr17:7557120|7557233 hsa-miR-6775-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:7557120|7557233
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MKLDLLVDGVLALRCLEEFSATAASSLGPQLRLCQ
Nucleotide Sequence CTGAAGCTGGACTTGCTGGTGGATGGTGTGCTGGCCCTGCGCTGCCTGGAGGAATTCTCAGCCACTGCGGCGAGTTCCCTCGGGCCCCAGCTCCGCCTCTGCCAG

CircID chr17:7557120|7557233
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MVCWPCAAWRNSQPLRRVPSGPSSASA
Nucleotide Sequence ATGGTGTGCTGGCCCTGCGCTGCCTGGAGGAATTCTCAGCCACTGCGGCGAGTTCCCTCGGGCCCCAGCTCCGCCTCTGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites