CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75603327|75603434
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCGGGGCAGGACTGACAAGGAGGCCACCGGGAGTGACTGGCAGCCCCGGGGGTCCTTCTGATTGGAGATGGACTCACTCTGCCCAGGACTGGGCCTAGCACCCAACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75603327|75603434 hsa-miR-223-5p 0 0 1
chr17:75603327|75603434 hsa-miR-223-3p 0 0 1
chr17:75603327|75603434 hsa-miR-612 0 1 1
chr17:75603327|75603434 hsa-miR-668-5p 0 0 1
chr17:75603327|75603434 hsa-miR-668-3p 0 0 1
chr17:75603327|75603434 hsa-miR-1262 0 0 1
chr17:75603327|75603434 hsa-miR-324-3p 0 0 1
chr17:75603327|75603434 hsa-miR-483-3p 0 0 1
chr17:75603327|75603434 hsa-miR-455-3p 0 0 1
chr17:75603327|75603434 hsa-miR-515-5p 0 1 1
chr17:75603327|75603434 hsa-miR-1285 0 0 1
chr17:75603327|75603434 hsa-miR-611 1 0 0
chr17:75603327|75603434 hsa-miR-762 1 0 0
chr17:75603327|75603434 hsa-miR-4277 0 1 0
chr17:75603327|75603434 hsa-miR-4456 0 1 0
chr17:75603327|75603434 hsa-miR-4751 0 1 0
chr17:75603327|75603434 hsa-miR-6860 0 1 0
chr17:75603327|75603434 hsa-miR-6861-5p 1 0 0
chr17:75603327|75603434 hsa-miR-6741-5p 0 1 0
chr17:75603327|75603434 hsa-miR-6762-3p 1 0 0
chr17:75603327|75603434 hsa-miR-3180-3p 1 0 0
chr17:75603327|75603434 hsa-miR-185-3p 0 1 0
chr17:75603327|75603434 hsa-miR-4697-3p 1 0 0
chr17:75603327|75603434 hsa-miR-6784-5p 0 1 0
chr17:75603327|75603434 hsa-miR-6878-3p 0 1 0
chr17:75603327|75603434 hsa-miR-1910-5p 0 1 0
chr17:75603327|75603434 hsa-miR-1295b-3p 0 1 0
chr17:75603327|75603434 hsa-miR-6838-3p 0 1 0
chr17:75603327|75603434 hsa-miR-6774-5p 1 0 0
chr17:75603327|75603434 hsa-miR-4745-5p 1 0 0
chr17:75603327|75603434 hsa-miR-3187-5p 0 1 0
chr17:75603327|75603434 hsa-miR-4758-5p 1 0 0
chr17:75603327|75603434 hsa-miR-1285-3p 0 1 0
chr17:75603327|75603434 hsa-miR-6791-3p 0 1 0
chr17:75603327|75603434 hsa-miR-6791-5p 0 1 0
chr17:75603327|75603434 hsa-miR-6744-3p 1 1 0
chr17:75603327|75603434 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:75603327|75603434
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MTRRPPGVTGSPGGPSDWRWTHSAQDWA
Nucleotide Sequence CTGACAAGGAGGCCACCGGGAGTGACTGGCAGCCCCGGGGGTCCTTCTGATTGGAGATGGACTCACTCTGCCCAGGACTGGGCCTAG

CircID chr17:75603327|75603434
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MGRVSPSPIRRTPGAASHSRWPPCQSCPE
Nucleotide Sequence CTGGGCAGAGTGAGTCCATCTCCAATCAGAAGGACCCCCGGGGCTGCCAGTCACTCCCGGTGGCCTCCTTGTCAGTCCTGCCCCGAG

CircID chr17:75603327|75603434
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence LGARPSPGQSESISNQKDPRGCQSLPVASLSVLPR
Nucleotide Sequence TTGGGTGCTAGGCCCAGTCCTGGGCAGAGTGAGTCCATCTCCAATCAGAAGGACCCCCGGGGCTGCCAGTCACTCCCGGTGGCCTCCTTGTCAGTCCTGCCCCGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites