CircRNA Information

General Information
circRNA Basic Information
CircID chr17:7560779|7561104
Strand +
CircType exon
Host Gene ENSG00000248871.1;
Algorism CIRI2;
Sequence CAGGTCTGGACAATGCCTGGCGCCCGTCCCCCGCCCCTCATCTACACACACGCAAGAATTCGGAGCTCCATGGGGAACAGAAGCAAGATATCCGTAAAATCAAAGTCTAGGGGGTGGGAATGAAAAGGGAAAAGTGAGGAACGGGGAGCCAAACCCAGGAAGACGCCTCTGTTCCTGCACATTCCCTCTCCTTTATATACTCAGCTCTTGGCTGTCTCCAGTATGTACCCACCCTGGTCTTCCAAGCTGGGAGCCACTTTTTATAACACAATCACAGTTTCACAAACCCCAGGAAGGTTCCATGTGGAGAGAGGTTAAGTTTCGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:7560779|7561104 hsa-miR-198 0 0 1
chr17:7560779|7561104 hsa-miR-204-5p 0 0 1
chr17:7560779|7561104 hsa-miR-204-3p 0 0 1
chr17:7560779|7561104 hsa-miR-211-5p 0 0 1
chr17:7560779|7561104 hsa-miR-211-3p 0 0 1
chr17:7560779|7561104 hsa-miR-206 0 1 1
chr17:7560779|7561104 hsa-miR-340-5p 0 0 1
chr17:7560779|7561104 hsa-miR-340-3p 0 0 1
chr17:7560779|7561104 hsa-miR-335-5p 0 0 1
chr17:7560779|7561104 hsa-miR-335-3p 0 0 1
chr17:7560779|7561104 hsa-miR-410-5p 0 0 1
chr17:7560779|7561104 hsa-miR-410-3p 0 0 1
chr17:7560779|7561104 hsa-miR-496 0 0 1
chr17:7560779|7561104 hsa-miR-613 0 0 1
chr17:7560779|7561104 hsa-miR-623 0 0 1
chr17:7560779|7561104 hsa-miR-629-5p 0 0 1
chr17:7560779|7561104 hsa-miR-629-3p 0 0 1
chr17:7560779|7561104 hsa-miR-758-5p 0 0 1
chr17:7560779|7561104 hsa-miR-758-3p 0 0 1
chr17:7560779|7561104 hsa-miR-1298-5p 0 0 1
chr17:7560779|7561104 hsa-miR-1298-3p 0 0 1
chr17:7560779|7561104 hsa-miR-873-5p 0 0 1
chr17:7560779|7561104 hsa-miR-873-3p 0 0 1
chr17:7560779|7561104 hsa-miR-1286 0 0 1
chr17:7560779|7561104 hsa-miR-1243 0 0 1
chr17:7560779|7561104 hsa-miR-1256 0 0 1
chr17:7560779|7561104 hsa-miR-548g-5p 0 0 1
chr17:7560779|7561104 hsa-miR-548g-3p 0 0 1
chr17:7560779|7561104 hsa-miR-142-5p 0 0 1
chr17:7560779|7561104 hsa-miR-423-5p 0 1 1
chr17:7560779|7561104 hsa-miR-1225-5p 0 0 1
chr17:7560779|7561104 hsa-miR-1224-3p 0 0 1
chr17:7560779|7561104 hsa-miR-188-3p 0 0 1
chr17:7560779|7561104 hsa-miR-508-3p 0 0 1
chr17:7560779|7561104 hsa-miR-1260 0 0 1
chr17:7560779|7561104 hsa-miR-1280 0 0 1
chr17:7560779|7561104 hsa-miR-7 0 0 1
chr17:7560779|7561104 hsa-miR-1 0 0 1
chr17:7560779|7561104 hsa-miR-663 0 0 1
chr17:7560779|7561104 hsa-miR-219-5p 0 0 1
chr17:7560779|7561104 hsa-miR-608 1 0 0
chr17:7560779|7561104 hsa-miR-663a 1 0 0
chr17:7560779|7561104 hsa-miR-762 1 0 0
chr17:7560779|7561104 hsa-miR-1270 0 1 0
chr17:7560779|7561104 hsa-miR-3138 1 0 0
chr17:7560779|7561104 hsa-miR-3141 1 0 0
chr17:7560779|7561104 hsa-miR-3170 0 1 0
chr17:7560779|7561104 hsa-miR-3195 1 0 0
chr17:7560779|7561104 hsa-miR-3196 1 0 0
chr17:7560779|7561104 hsa-miR-4326 0 1 0
chr17:7560779|7561104 hsa-miR-4428 0 1 0
chr17:7560779|7561104 hsa-miR-4488 1 1 0
chr17:7560779|7561104 hsa-miR-4538 0 1 0
chr17:7560779|7561104 hsa-miR-4651 1 0 0
chr17:7560779|7561104 hsa-miR-4656 1 0 0
chr17:7560779|7561104 hsa-miR-4673 0 1 0
chr17:7560779|7561104 hsa-miR-4678 0 1 0
chr17:7560779|7561104 hsa-miR-4706 1 0 0
chr17:7560779|7561104 hsa-miR-4767 1 0 0
chr17:7560779|7561104 hsa-miR-5087 0 1 0
chr17:7560779|7561104 hsa-miR-5194 1 0 0
chr17:7560779|7561104 hsa-miR-6127 0 1 0
chr17:7560779|7561104 hsa-miR-7974 1 0 0
chr17:7560779|7561104 hsa-miR-8058 0 1 0
chr17:7560779|7561104 hsa-miR-8072 1 0 0
chr17:7560779|7561104 hsa-miR-8082 0 1 0
chr17:7560779|7561104 hsa-miR-8089 1 0 0
chr17:7560779|7561104 hsa-miR-9899 1 1 0
chr17:7560779|7561104 hsa-miR-12116 1 0 0
chr17:7560779|7561104 hsa-miR-4433b-3p 1 0 0
chr17:7560779|7561104 hsa-miR-7-5p 0 1 0
chr17:7560779|7561104 hsa-miR-671-5p 1 0 0
chr17:7560779|7561104 hsa-miR-149-5p 1 1 0
chr17:7560779|7561104 hsa-miR-6894-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4786-5p 1 1 0
chr17:7560779|7561104 hsa-miR-6757-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6873-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6867-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6875-3p 1 0 0
chr17:7560779|7561104 hsa-miR-6832-3p 0 1 0
chr17:7560779|7561104 hsa-miR-1292-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6805-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6782-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6821-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6810-5p 0 1 0
chr17:7560779|7561104 hsa-miR-532-3p 0 1 0
chr17:7560779|7561104 hsa-miR-1343-3p 0 1 0
chr17:7560779|7561104 hsa-miR-6786-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6852-5p 0 1 0
chr17:7560779|7561104 hsa-miR-939-3p 1 0 0
chr17:7560779|7561104 hsa-miR-1226-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4738-3p 1 0 0
chr17:7560779|7561104 hsa-miR-6763-3p 1 0 0
chr17:7560779|7561104 hsa-miR-3186-5p 0 1 0
chr17:7560779|7561104 hsa-miR-193b-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6753-5p 1 0 0
chr17:7560779|7561104 hsa-miR-1908-5p 1 1 0
chr17:7560779|7561104 hsa-miR-1228-5p 1 0 0
chr17:7560779|7561104 hsa-miR-92b-5p 1 1 0
chr17:7560779|7561104 hsa-miR-4787-5p 1 0 0
chr17:7560779|7561104 hsa-miR-3160-3p 0 1 0
chr17:7560779|7561104 hsa-miR-4446-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6789-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6742-3p 0 1 0
chr17:7560779|7561104 hsa-miR-5010-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4776-5p 1 0 0
chr17:7560779|7561104 hsa-miR-3191-3p 1 1 0
chr17:7560779|7561104 hsa-miR-6499-5p 0 1 0
chr17:7560779|7561104 hsa-miR-4524a-3p 0 1 0
chr17:7560779|7561104 hsa-miR-6839-3p 0 1 0
chr17:7560779|7561104 hsa-miR-6885-3p 1 1 0
chr17:7560779|7561104 hsa-miR-4652-3p 0 1 0
chr17:7560779|7561104 hsa-miR-3156-3p 0 1 0
chr17:7560779|7561104 hsa-miR-10400-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4763-3p 1 0 0
chr17:7560779|7561104 hsa-miR-6769b-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6787-5p 1 1 0
chr17:7560779|7561104 hsa-miR-6816-5p 1 1 0
chr17:7560779|7561104 hsa-miR-1343-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6737-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6743-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6756-5p 1 1 0
chr17:7560779|7561104 hsa-miR-6769a-5p 1 1 0
chr17:7560779|7561104 hsa-miR-6813-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6819-5p 1 0 0
chr17:7560779|7561104 hsa-miR-10401-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6797-5p 0 1 0
chr17:7560779|7561104 hsa-miR-7111-5p 1 0 0
chr17:7560779|7561104 hsa-miR-10392-5p 1 0 0
chr17:7560779|7561104 hsa-miR-10396a-5p 1 0 0
chr17:7560779|7561104 hsa-miR-10396b-5p 1 1 0
chr17:7560779|7561104 hsa-miR-1237-5p 1 0 0
chr17:7560779|7561104 hsa-miR-328-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4649-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4685-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4725-3p 1 0 0
chr17:7560779|7561104 hsa-miR-4749-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6794-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6795-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6848-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6885-5p 1 0 0
chr17:7560779|7561104 hsa-miR-939-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6731-5p 1 0 0
chr17:7560779|7561104 hsa-miR-4665-5p 1 0 0
chr17:7560779|7561104 hsa-miR-6855-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6766-5p 0 1 0
chr17:7560779|7561104 hsa-miR-10398-5p 0 1 0
chr17:7560779|7561104 hsa-miR-6791-5p 1 0 0
chr17:7560779|7561104 hsa-miR-10400-3p 1 0 0
chr17:7560779|7561104 hsa-miR-6783-3p 0 1 0
chr17:7560779|7561104 hsa-miR-5006-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:7560779|7561104
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MPGARPPPLIYTHARIRSSMGNRSKISVKSKSRGWE
Nucleotide Sequence ATGCCTGGCGCCCGTCCCCCGCCCCTCATCTACACACACGCAAGAATTCGGAGCTCCATGGGGAACAGAAGCAAGATATCCGTAAAATCAAAGTCTAGGGGGTGGGAATGA

CircID chr17:7560779|7561104
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MFLHIPSPLYTQLLAVSSMYPPWSSKLGATFYNTITVSQTPGRFHVERG
Nucleotide Sequence CTGTTCCTGCACATTCCCTCTCCTTTATATACTCAGCTCTTGGCTGTCTCCAGTATGTACCCACCCTGGTCTTCCAAGCTGGGAGCCACTTTTTATAACACAATCACAGTTTCACAAACCCCAGGAAGGTTCCATGTGGAGAGAGGTTAA

CircID chr17:7560779|7561104
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MAPVPRPSSTHTQEFGAPWGTEARYP
Nucleotide Sequence CTGGCGCCCGTCCCCCGCCCCTCATCTACACACACGCAAGAATTCGGAGCTCCATGGGGAACAGAAGCAAGATATCCGTAA

CircID chr17:7560779|7561104
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MSPVCTHPGLPSWEPLFITQSQFHKPQEGSMWREVKFR
Nucleotide Sequence CTGTCTCCAGTATGTACCCACCCTGGTCTTCCAAGCTGGGAGCCACTTTTTATAACACAATCACAGTTTCACAAACCCCAGGAAGGTTCCATGTGGAGAGAGGTTAAGTTTCGC

CircID chr17:7560779|7561104
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MDNAWRPSPAPHLHTRKNSELHGEQKQDIRKIKV
Nucleotide Sequence CTGGACAATGCCTGGCGCCCGTCCCCCGCCCCTCATCTACACACACGCAAGAATTCGGAGCTCCATGGGGAACAGAAGCAAGATATCCGTAAAATCAAAGTCTAG

CircID chr17:7560779|7561104
ORF Type ORF6
Protein Length 46
Nucleotide Length 141
Protein Sequence MCRNRGVFLGLAPRSSLFPFHSHPLDFDFTDILLLFPMELRILACV
Nucleotide Sequence ATGTGCAGGAACAGAGGCGTCTTCCTGGGTTTGGCTCCCCGTTCCTCACTTTTCCCTTTTCATTCCCACCCCCTAGACTTTGATTTTACGGATATCTTGCTTCTGTTCCCCATGGAGCTCCGAATTCTTGCGTGTGTGTAG

CircID chr17:7560779|7561104
ORF Type ORF7
Protein Length 54
Nucleotide Length 165
Protein Sequence MCYKKWLPAWKTRVGTYWRQPRAEYIKERECAGTEASSWVWLPVPHFSLFIPTP
Nucleotide Sequence TTGTGTTATAAAAAGTGGCTCCCAGCTTGGAAGACCAGGGTGGGTACATACTGGAGACAGCCAAGAGCTGAGTATATAAAGGAGAGGGAATGTGCAGGAACAGAGGCGTCTTCCTGGGTTTGGCTCCCCGTTCCTCACTTTTCCCTTTTCATTCCCACCCCCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites