CircRNA Information

General Information
circRNA Basic Information
CircID chr17:75617833|75618164
Strand -
CircType exon
Host Gene ENSG00000266714.5;
Algorism CIRI2;
Sequence CAGGGGGTCTCCACCCAGCTACTCGCGCCCTCTGGCAGCGTGTGCTTCTCCTACACCGGCACGCCCTGGAAGTTGTTCCTACGCAAGGAGGTGGGCATGAGGGTGGGGCCTTGGCCTGGCCTCTTTGGGCTGGCAGGGAGGCGGCAGGCTTTGTGCATCCCAGCCTGGGACCCCAGCATCCCCTCCCCACAGCCCACCATCTCAAGGCTGATTTTCCAGGCCTGGGAGGGCAGAGGCTTGCTGGGAAGAGGCACCAGACCCACCGATCTTTGCCCTTCTGTGCCCTCCTCCAGGTGTTCTACCCACGGGAGAACTTCAGCCATCCCTACTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:75617833|75618164 hsa-miR-143-5p 0 0 1
chr17:75617833|75618164 hsa-miR-143-3p 0 0 1
chr17:75617833|75618164 hsa-miR-583 0 1 1
chr17:75617833|75618164 hsa-miR-596 0 1 1
chr17:75617833|75618164 hsa-miR-619-5p 0 0 1
chr17:75617833|75618164 hsa-miR-619-3p 0 0 1
chr17:75617833|75618164 hsa-miR-765 0 1 1
chr17:75617833|75618164 hsa-miR-541-5p 0 0 1
chr17:75617833|75618164 hsa-miR-541-3p 0 0 1
chr17:75617833|75618164 hsa-miR-939-5p 0 0 1
chr17:75617833|75618164 hsa-miR-939-3p 0 0 1
chr17:75617833|75618164 hsa-miR-1236-5p 0 0 1
chr17:75617833|75618164 hsa-miR-1236-3p 0 0 1
chr17:75617833|75618164 hsa-miR-1202 0 1 1
chr17:75617833|75618164 hsa-miR-1293 0 0 1
chr17:75617833|75618164 hsa-miR-1281 0 0 1
chr17:75617833|75618164 hsa-miR-491-5p 0 0 1
chr17:75617833|75618164 hsa-miR-615-5p 1 1 1
chr17:75617833|75618164 hsa-miR-193a-5p 0 0 1
chr17:75617833|75618164 hsa-miR-654-5p 0 0 1
chr17:75617833|75618164 hsa-miR-1224-3p 0 1 1
chr17:75617833|75618164 hsa-miR-502-5p 0 0 1
chr17:75617833|75618164 hsa-miR-875-3p 0 0 1
chr17:75617833|75618164 hsa-miR-324-3p 1 0 1
chr17:75617833|75618164 hsa-miR-1268 0 0 1
chr17:75617833|75618164 hsa-miR-1254 0 0 1
chr17:75617833|75618164 hsa-miR-346 1 1 0
chr17:75617833|75618164 hsa-miR-623 1 0 0
chr17:75617833|75618164 hsa-miR-762 1 0 0
chr17:75617833|75618164 hsa-miR-1268a 1 1 0
chr17:75617833|75618164 hsa-miR-1538 1 0 0
chr17:75617833|75618164 hsa-miR-2861 1 0 0
chr17:75617833|75618164 hsa-miR-3147 0 1 0
chr17:75617833|75618164 hsa-miR-3911 1 0 0
chr17:75617833|75618164 hsa-miR-1268b 1 1 0
chr17:75617833|75618164 hsa-miR-4449 1 0 0
chr17:75617833|75618164 hsa-miR-4507 1 0 0
chr17:75617833|75618164 hsa-miR-1587 1 0 0
chr17:75617833|75618164 hsa-miR-3972 1 1 0
chr17:75617833|75618164 hsa-miR-4647 1 1 0
chr17:75617833|75618164 hsa-miR-4651 1 0 0
chr17:75617833|75618164 hsa-miR-4656 1 0 0
chr17:75617833|75618164 hsa-miR-4739 0 1 0
chr17:75617833|75618164 hsa-miR-4741 1 1 0
chr17:75617833|75618164 hsa-miR-4779 0 1 0
chr17:75617833|75618164 hsa-miR-5787 1 1 0
chr17:75617833|75618164 hsa-miR-7974 1 0 0
chr17:75617833|75618164 hsa-miR-8065 0 1 0
chr17:75617833|75618164 hsa-miR-211-3p 1 0 0
chr17:75617833|75618164 hsa-miR-6749-3p 0 1 0
chr17:75617833|75618164 hsa-miR-4731-5p 0 1 0
chr17:75617833|75618164 hsa-miR-7155-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6765-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6836-3p 1 0 0
chr17:75617833|75618164 hsa-miR-6825-5p 0 1 0
chr17:75617833|75618164 hsa-miR-4687-3p 1 0 0
chr17:75617833|75618164 hsa-miR-6720-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6728-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6757-5p 1 0 0
chr17:75617833|75618164 hsa-miR-7160-5p 1 0 0
chr17:75617833|75618164 hsa-miR-296-5p 0 1 0
chr17:75617833|75618164 hsa-miR-197-5p 1 1 0
chr17:75617833|75618164 hsa-miR-8069 1 0 0
chr17:75617833|75618164 hsa-miR-3189-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6849-3p 1 1 0
chr17:75617833|75618164 hsa-miR-6748-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6793-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6796-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6732-5p 1 0 0
chr17:75617833|75618164 hsa-miR-3194-5p 1 1 0
chr17:75617833|75618164 hsa-miR-7109-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6786-5p 0 1 0
chr17:75617833|75618164 hsa-miR-1226-5p 1 1 0
chr17:75617833|75618164 hsa-miR-4763-5p 0 1 0
chr17:75617833|75618164 hsa-miR-4707-3p 1 0 0
chr17:75617833|75618164 hsa-miR-1229-5p 1 1 0
chr17:75617833|75618164 hsa-miR-4783-3p 1 0 0
chr17:75617833|75618164 hsa-miR-6784-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6894-3p 0 1 0
chr17:75617833|75618164 hsa-miR-4640-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6753-5p 1 0 0
chr17:75617833|75618164 hsa-miR-7113-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6771-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6749-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6824-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6870-3p 0 1 0
chr17:75617833|75618164 hsa-miR-423-5p 1 1 0
chr17:75617833|75618164 hsa-miR-4758-3p 0 1 0
chr17:75617833|75618164 hsa-miR-597-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6778-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6865-3p 0 1 0
chr17:75617833|75618164 hsa-miR-4746-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6777-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6768-3p 0 1 0
chr17:75617833|75618164 hsa-miR-1207-5p 1 0 0
chr17:75617833|75618164 hsa-miR-1233-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6769b-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6775-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6726-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6737-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6743-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6769a-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6803-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6851-5p 1 0 0
chr17:75617833|75618164 hsa-miR-11181-3p 0 1 0
chr17:75617833|75618164 hsa-miR-1249-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6763-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6879-5p 1 1 0
chr17:75617833|75618164 hsa-miR-1915-3p 1 0 0
chr17:75617833|75618164 hsa-miR-3620-5p 1 1 0
chr17:75617833|75618164 hsa-miR-4728-5p 0 1 0
chr17:75617833|75618164 hsa-miR-328-5p 1 1 0
chr17:75617833|75618164 hsa-miR-4632-5p 1 0 0
chr17:75617833|75618164 hsa-miR-4685-5p 1 1 0
chr17:75617833|75618164 hsa-miR-6858-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6883-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6831-5p 0 1 0
chr17:75617833|75618164 hsa-miR-10394-3p 1 0 0
chr17:75617833|75618164 hsa-miR-6855-5p 1 0 0
chr17:75617833|75618164 hsa-miR-3116 0 1 0
chr17:75617833|75618164 hsa-miR-6877-3p 1 1 0
chr17:75617833|75618164 hsa-miR-6750-5p 1 0 0
chr17:75617833|75618164 hsa-miR-6785-5p 0 1 0
chr17:75617833|75618164 hsa-miR-3184-5p 1 0 0
chr17:75617833|75618164 hsa-miR-2682-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6753-3p 1 0 0
chr17:75617833|75618164 hsa-miR-4722-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6893-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6837-5p 0 1 0
chr17:75617833|75618164 hsa-miR-6819-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6823-3p 0 1 0
chr17:75617833|75618164 hsa-miR-6781-3p 0 1 0
chr17:75617833|75618164 hsa-miR-4690-3p 1 1 0
chr17:75617833|75618164 hsa-miR-6506-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:75617833|75618164
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MFLRKEVGMRVGPWPGLFGLAGRRQALCIPAWDPSIPSPQPTISRLIFQAWEGRGLLGRGTRPTDLCPSVPSSRCSTHGRTSAIPT
Nucleotide Sequence TTGTTCCTACGCAAGGAGGTGGGCATGAGGGTGGGGCCTTGGCCTGGCCTCTTTGGGCTGGCAGGGAGGCGGCAGGCTTTGTGCATCCCAGCCTGGGACCCCAGCATCCCCTCCCCACAGCCCACCATCTCAAGGCTGATTTTCCAGGCCTGGGAGGGCAGAGGCTTGCTGGGAAGAGGCACCAGACCCACCGATCTTTGCCCTTCTGTGCCCTCCTCCAGGTGTTCTACCCACGGGAGAACTTCAGCCATCCCTACT
CircID chr17:75617833|75618164
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MASLGWQGGGRLCASQPGTPASPPHSPPSQG
Nucleotide Sequence CTGGCCTCTTTGGGCTGGCAGGGAGGCGGCAGGCTTTGTGCATCCCAGCCTGGGACCCCAGCATCCCCTCCCCACAGCCCACCATCTCAAGGCTGA
CircID chr17:75617833|75618164
ORF Type ORF3
Protein Length 89
Nucleotide Length 267
Protein Sequence MEVVPTQGGGHEGGALAWPLWAGREAAGFVHPSLGPQHPLPTAHHLKADFPGLGGQRLAGKRHQTHRSLPFCALLQVFYPRENFSHPYY
Nucleotide Sequence CTGGAAGTTGTTCCTACGCAAGGAGGTGGGCATGAGGGTGGGGCCTTGGCCTGGCCTCTTTGGGCTGGCAGGGAGGCGGCAGGCTTTGTGCATCCCAGCCTGGGACCCCAGCATCCCCTCCCCACAGCCCACCATCTCAAGGCTGATTTTCCAGGCCTGGGAGGGCAGAGGCTTGCTGGGAAGAGGCACCAGACCCACCGATCTTTGCCCTTCTGTGCCCTCCTCCAGGTGTTCTACCCACGGGAGAACTTCAGCCATCCCTACTAC
CircID chr17:75617833|75618164
ORF Type ORF4
Protein Length 90
Nucleotide Length 273
Protein Sequence MAEVLPWVEHLEEGTEGQRSVGLVPLPSKPLPSQAWKISLEMVGCGEGMLGSQAGMHKACRLPASPKRPGQGPTLMPTSLRRNNFQGVPV
Nucleotide Sequence ATGGCTGAAGTTCTCCCGTGGGTAGAACACCTGGAGGAGGGCACAGAAGGGCAAAGATCGGTGGGTCTGGTGCCTCTTCCCAGCAAGCCTCTGCCCTCCCAGGCCTGGAAAATCAGCCTTGAGATGGTGGGCTGTGGGGAGGGGATGCTGGGGTCCCAGGCTGGGATGCACAAAGCCTGCCGCCTCCCTGCCAGCCCAAAGAGGCCAGGCCAAGGCCCCACCCTCATGCCCACCTCCTTGCGTAGGAACAACTTCCAGGGCGTGCCGGTGTAG
CircID chr17:75617833|75618164
ORF Type ORF5
Protein Length 68
Nucleotide Length 204
Protein Sequence MRWWAVGRGCWGPRLGCTKPAASLPAQRGQAKAPPSCPPPCVGTTSRACRCRRSTRCQRARVAGWRPP
Nucleotide Sequence TTGAGATGGTGGGCTGTGGGGAGGGGATGCTGGGGTCCCAGGCTGGGATGCACAAAGCCTGCCGCCTCCCTGCCAGCCCAAAGAGGCCAGGCCAAGGCCCCACCCTCATGCCCACCTCCTTGCGTAGGAACAACTTCCAGGGCGTGCCGGTGTAGGAGAAGCACACGCTGCCAGAGGGCGCGAGTAGCTGGGTGGAGACCCCCT
CircID chr17:75617833|75618164
ORF Type ORF6
Protein Length 37
Nucleotide Length 114
Protein Sequence MWGGDAGVPGWDAQSLPPPCQPKEARPRPHPHAHLLA
Nucleotide Sequence CTGTGGGGAGGGGATGCTGGGGTCCCAGGCTGGGATGCACAAAGCCTGCCGCCTCCCTGCCAGCCCAAAGAGGCCAGGCCAAGGCCCCACCCTCATGCCCACCTCCTTGCGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab